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Products


DNA/RNA Amplification Kits


AccuPower® PreMix series is an innovative PCR master mix product range designed to make your PCR, reverse transcription (cDNA amplification) and RT-PCR experiments easier and more cost effective than ever. With a wide range of applications and unparalleled ease of use and stability, AccuPower® PreMix PCR master mix series will be an important addition to your collection of research tools.

Each tube or plate you order has all the components of a PCR master mix (enzyme, buffer, dNTPs) lyophilized with a patented stabilizer that maintains full activity for over one month at room temperature and up to two years in the freezer. Simply add your primers and template – and never make a dNTP or PCR enzyme stock solution again!

In addition, AccuPower®’s reaction stability is maintained at 95°C for up to 3 times longer than Taq DNA polymerase, making it an ideal enzyme for amplifying G:C rich DNA at temperatures above 50°C.

AccuPower® PreMix PCR master mix is available with or without loading dye. When loading dye is present you can load it directly into your gel following PCR – no glycerol or glucose is required.
 

Features and Benefits

  •  Fast: just add primer and template
  •  Convenient: no more dNTP or enzyme stock solutions required
  •  Flexible: available in tube (0.2 or 0.5 ml) or plate (96 or 384 well) formats
  •  Stable: for up to 2 years in the freezer and one month at room temperature
  •  Customizable: available with primers already added for even greater convenience
  •  Gel loading : available with or without tracking dye for ease of use
     


 

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DNA Amplification

  Amplification PCR PreMix Taq PCR PreMix Hotstart PCR PreMix Pyro Hotstart Taq PCR PreMix    Pfu PCR PreMix Multiplex PCR PreMix Gold Multiplex PCR PreMix
PCR Standard PCR  
Hot-start PCR      
High-fidelity PCR            
Long-range PCR              
GC rich PCR          
Real-Time PCR              
Multiplex PCR      


RNA Amplification

  Amplification RT PreMix Cycle Script RT PreMix Rocket Script RT PreMix Rocket Script Cycle RT PreMix RT/PCR PreMix RocketScript RT/PCR PreMix Rocket Plex RT/PCR PreMix
PCR Standard PCR        
RT Standard RT
Cycle RT      
RT/PCR Standard RT/PCR        
Multiplex RT/PCR            


Real time PCR

  Amplification GreenStar
qPCR PreMix
2X GreenStar
qPCR master Mix
DualStar
qPCR PreMix
PCR Standard PCR      
Hot-start PCR      
High-Fidelity PCR      
Long-range PCR      
GC rich PCR      
Real-Time PCR
MultiplexPCR      


Specifications of AccuPower PreMix series

Product Product Size Yield Specificity Fidelity Conven-
ience
GCrich Heat
Stability
Lambda Human
PCR PreMix ≤ 10 kb ≤ 3 kb ***** *** *** ***** *** ***
Taq PCR PreMix ≤ 10 kb ≤ 3 kb ***** *** *** ***** *** ***
Hotstart PCR PreMix ≤ 12 kb ≤ 3 kb **** **** *** ***** **** ****
PyroHotstart Taq PCR PreMix ≤ 12 kb ≤ 3 kb **** **** *** ***** **** ****
Pfu PCR PreMix ≤ 20 kb ≤ 10 kb *** *** **** ***** *** ***
ProFi Taq PCR PreMix ≤ 30 kb ≤ 21 kb *** **** ***** ***** *** ****
Multiplex PCR PreMix - 1~20 frag. **** **** *** ***** *** ****
Gold Multiplex PCR PreMix - 1~20 frag. **** **** *** ***** *** ****
RT PreMix - < 9 kb *** - - ***** *** ***
CycleScript RT PreMix - < 9 kb **** - - ***** *** ***
RocKetScript™ RT PreMix - < 10kb **** - - ***** **** ****
RocKetScript™ Cycle RT PreMix - < 10kb **** - - ***** **** ****
RT/PCR PreMix - < 6 kb **** - - ***** *** ***
RocKetScript™ RT/PCR PreMix - < 6 kb **** - - ***** *** ****
RocketPlex RT/PCR PreMix - < 6 kb **** **** - ***** *** ****
GreenStar™ qPCR PreMix - - *** **** - ***** **** ****
2X GreenStar™ qPCR master Mix - - *** **** - ***** **** ****
DualStar™ qPCR PreMix - - *** ***** - ***** **** ****

 

 















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Enzymes


For PCR, Reverse Transcription, RT-PCR and Ligation

Novel PCR polymerases with unique performance features

Bioneer offers a wide range of enzymes for PCR, Reverse Transcription, Reverse Transcriptase PCR (RT-PCR) and DNA Ligation. Our Top DNA Polymerase is the fastest thermostable PCR polymerase on the market. We are the only company to use a novel “enzyme-mediated” HotStart in our enzymes. In addition, our CycleScript Reverse Transcriptase uses a Cyclic-RT reaction that allows for robust cDNA synthesis of the rarest transcripts.

For faster and easier reaction set up, the AccuPower® PreMix Series contains each enzyme and all other PCR contents in an easy to resuspend lyophilized mix.

 

Features and Benefits

  • Fast: Highly processive enzymes
  • Flexible: for all applications from standard, to high fidelity and long range and more!
  • Value: No license fees associated with our novel enzymes saves you money!
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  Application DNA Polymerase Hotstart DNA Polymerase ProFi Taq
DNA
Polymerase
Reverse transcriptase Top Taq pfu Top Taq MMLV RT CycleScript RTase RocketScript Rtase PCR Standard PCR       Hotstart PCR             High-fidelity PCR               Long range PCR               High sensivity                 GC rich PCR               Multiplex PCR               RT Standard RT             Cyclic RT                 Standard RT/PCR                  

Specifications of Bioneer Enzymes

Product Name Product size Yield Specificity Fidelity GC-rich Heat Stability Leaves 3'-A
Top DNA Polymerase ~ 10 kb ***** **** *** *** *** Yes
Taq DNA Polymerase ~ 10 kb ***** *** *** *** *** Yes
Hotstart DNA Polymerase ~ 12 kb **** **** *** **** **** Yes
Hotstart Taq DNA Polymerase ~ 12 kb **** **** *** **** **** Yes
ProFi Taq DNA Polymerase ~ 20 kb **** **** *** **** **** Yes
Pfu DNA Polymerase ~ 10 kb ** *** **** ** *** No
M-MLV Reverse Transcriptase ~ 9 kb *** - - *** ** -
CycleScript Reverse
Transcriptase
~ 9 kb **** - - *** *** -
RocketScript Reverse
Transcriptase         
~ 10 kb **** - - *** **** -









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DNA Amplification


Standard PCR


AccuPower® PCR PreMix


PCR master mix containing a novel Top DNA Polymerase



Bioneer’s AccuPower® PCR PreMix is a convenient lyophilized PCR master mix containing Top DNA Polymerase, dNTPs, reaction buffer, tracking dye, and a patented stabilizer. AccuPower® PreMix PCR master mix includes our super-processive “three times faster than Taq” Top DNA Polymerase for the fastest nucleic acid amplification.
While Top DNA Polymerase is ideal for applications where you would normally use Taq, if your needs include HotStart PCR or High Fidelity PCR, please see our AccuPower® HotStart PCR and AccuPower® TLA product pages. AccuPower® PreMix PCR master mix is available with or without tracking dye, depending on your application.
If purchased with tracking dye, reactions can be loaded onto agarose gels without adding loading buffer.

 

Features and Benefits

  • Ease of use: just add template and primers and start your PCR. dNTPs, buffer and enzyme are incorporated.
  • Stability: stable at room temperature for a month and up to 2 years in a -20°C freezer
  • Gel loading: available with or without a tracking dye for ease of use
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Specifications

5' to 3' exonuclease activity: No
3' to 5' exonuclease activity: No
Terminal transferase activity: Yes
Fragment Size: Up to 10 kb

 

Application

Standard PCR



Figure 1. Processivity comparison with Lambda DNA template and different PCR reagents.

M: 100 bp Plus DNA Ladder (D-1035)
A: AccuPower® PCR PreMix
B: Taq mastermix from Company S
C: Taq mastermix from Company T
Lane M: 1 kb DNA Ladder (D-1040)
Lane 1: 1 kb PCR product
Lane 2: 2 kb PCR product
Lane 3: 3 kb PCR product
Lane 4: 4 kb PCR product


Figure 2. Comparison of sensitivity test for AccuPower® PreMix PCR master mix and other companies' products using serial diluted human genomic DNA.
Reaction condition: 95°C for 5 minutes, followed by 35 cycles of 20 seconds at 95°C, 20 seconds at 60°C, 30 seconds at 72°C.

A: human Insulin receptor gene
B: DNA cross-link repair 1A gene
I: AccuPower® PCR PreMix
II: Taq DNA Polymerase from Company A
III: Taq DNA Polymerase from Company Q
IV: PCR PreMix from Company I
M: 100 bp DNA ladder (D-1030)
Lane 1: 10 ng
Lane 2: 1 ng
Lane 3: 100 ng
Lane 4: 10 ng


 

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Manual

AccuPower® PCR PreMix

 

MSDS

• MSDS_AccuPower® PCR PreMix



Brochure

AccuPower® PreMix series - 2010 Brochure



Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate

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DNA/RNA Preparation Kits


Bioneer utilizes 5 different types of nucleic acid extraction technologies to provide a range of options from simple, manual kits to fully automated extraction platforms.

When used with the ExiProgen™ instrument (KOR: 10-2011-0085824), ExiProgen™ DNA/ RNA Extraction Kits can automatically extract high quality nucleic acids from various sample types including blood, animal tissue, cell cultures and plant tissues. This product uses a 'Pre-Loaded Buffer Cartridge System' which provides user convenience and reproducibility by loading all necessary reagents within the kit. The pre-installed protocols are optimized for sample and target nucleic acid type to provide robust results run after run. The silica magnetic particles used in the product have high DNA/RNA binding capacity and were developed using in-house nanoparticle R&D expertise (KOR: 10-1053023).

The AccuPrep® DNA/ RNA Extraction Kit uses a single spin column with glass micro fiber filters.
Bioneer provides various products for high-purity and high-yield Genomic DNA, Plasmid DNA, Viral RNA or fragment DNA. TheAccuPrep® Nano-Plus Plasmid DNA Extraction Kit uses Bioneer’s proprietary cell fragment and protein removal technology (KOR: 10-085043, Nucleic acid separation method and nucleic acid separation mixture using particle material) to reduce plasmid DNA prep time from the usual 30 minutes to a revolutionary 10 minutes. The nano-particles contained within the product form a complex with cellular debris, denatured proteins and chromosomal DNA to form a clear lysate that contains only plasmid DNA within just 1 minute (compared to the traditional 10 minutes), shortening the entire process to a mere 10 minutes.

The AccuPrep® DNA Extraction Kit for 96 well vacuum manifold is designed for high-throughput DNA extraction. The 96-well plate format kit is attached to a vacuum manifold (BioVac™ 96 vacuum manifold) to extract and purify DNA from up to 96 samples simultaneously.

The AccuPrep® Quick DNA Kit enables you to extract PCR-grade genomic DNA by incubation in a single tube. The product is based on Bioneer’s proprietary cell fragment and protein removal technology (KOR: 10-085043, Nucleic acid separation method and nucleic acid separation mixture using particle material) to extract genomic DNA from samples such as mouse or rat tail tips without the complex workflow commonly associated with this type of extraction.

Finally, the PrepMate and AccuZol products use traditional organic solvent DNA/RNA extraction methods. These products contain phenol and chaotrotic salts to stop the activity of various nucleases and extract high-quality nucleic acids. These products are especially suitable for large input volumes or a manual workflow.

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Bioneer has 5 types of nucleic acid extraction product lines from manual kits to automated platforms.

Kit type Nucleic Acid type Kit
Automated Nucleic Acid Extraction Kits Genomic DNA ExiPrep™ Blood Genomic DNA Kit
ExiPrep™ Tissue Genomic DNA Kit
ExiPrep™ Bacteria Genomic DNA Kit
ExiPrep™ Plant Genomic DNA Kit
ExiPrep™ Beef Genomic DNA Kit
ExiPrep™ Rice Genomic DNA Kit
Total RNA ExiPrep™ Tissue total RNA Kit
ExiPrep™ Cell total RNA Kit
Viral DNA/ RNA ExiPrep™ Viral DNA/ RNA Kit
Single Spin column type Nucleic Acid Extraction Kits Plasmid DNA AccuPrep® Nano-Plus Plasmid Mini Extraction Kit
AccuPrep® Nano-Plus Plasmid Midi Extraction Kit
AccuPrep® Nano-Plus Plasmid Maxi Extraction Kit
AccuPrep® Plasmid Mini Extraction Kit
Genomic DNA AccuPrep® Genomic DNA Extraction Kit
AccuPrep® GMO DNA Extraction Kit
AccuPrep® Stool DNA Extraction Kit
Fragment DNA AccuPrep® PCR Purification Kit
AccuPrep® Gel Purification Kit
Viral RNA AccuPrep® Viral RNA Extraction Kit
96-well vacuum manifold type Nucleic Acid Extraction Kits Plasmid DNA AccuPrep® Plasmid DNA Extraction Kit for 96 well vacuum manifold
Genomic DNA AccuPrep® Genomic DNA Extraction Kit for 96 well vacuum manifold
Fragment DNA AccuPrep® PCR Purification Kit for 96 well vacuum manifold
Single tube Nucleic Acid Extraction Kit Genomic DNA AccuPrep® Quick DNA Kit
Solution based Nucleic Acid Extraction Kits DNA DNA PrepMate™-II
DNA PrepMate™-M
RNA AccuZol™ total RNA Extraction Solution
Blood RNA PrepMate
Tissue RNA PrepMate
Viral RNA PrepMate
Nucleic Acid Extraction Tools BioVac™ 96 Vacuum Manifold
Tissue Homogenization Set

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Oligo Synthesis Service


Individual needs, high throughput or bulk quantities; Bioneer has your oligo bases covered.

Bioneer, founded in 1992, is one of the world’s leading suppliers of synthetic oligonucleotides (DNA and RNA).
In-house production of raw materials (phosphoramidites, reagents & solvents) combined with automated oligo synthesis and purification systems, results in superior quality oligonucleotides at a great price.
Since Bioneer manufactures all of the components that go into our oligonucleotides, we manage quality control every step of the way – ensuring that you receive only the highest quality product.
Every Bioneer oligonucleotide is purified free of charge utilising our unique Bio-RP cartridge purification technology. Bio-RP removes many impurities and synthesis failure products that are still present in an oligo after desalting*.
These impurities contribute to the OD measurement of competitor oligonucleotides that are merely desalted – and artificially inflate yield (see below).
Bioneer’s standard Bio-RP cartridge purification is near HPLC quality with only full-length product resulting. 
We are so confident with our oligonucleotide quality that we are the only company to offer a 100% guarantee that they will work for your PCR or qPCR application!
With high throughput oligo synthesis facilities around the world, Bioneer’s daily capacity is unsurpassed.
Bioneer is unrivalled in its ability to address the needs of customers requiring a few oligonucleotides on a regular basis and those customers that require very large numbers of oligonucleotides on a less frequent basis. We will also respond to your special customisation needs – personally.
 

Features and Benefits

  • Free Bio-RP purification: Near HPLC purity at a standard oligo price
  • Quick turnaround time: < 3.5 business days from order to bench in most cases
  • Broad range of modifications available: If you don’t see it, just ask, we can probably do it
  • Competitive pricing: Great value for your research dollar

 

Why is Bio-RP purification better than desalting?

Most oligos sold are merely deprotected/desalted. The process of deprotection/desalting only partially purifies the oligo and leaves behind many impurities* and failure products (truncated oligos that will not amplify and that may interfere with certain applications). These can lead to artificially inflated OD readings that increase with oligo length.
Bio-RP purification removes these contaminants and failure products, resulting in an oligo that demonstrates near HPLC purity. The advantage to you is that our product contains only quality oligos minus impurities that may inhibit some PCR reactions and that potentially skew qPCR reactions.
We deliver the same amount of active oligo as our competitors; they just have more “other” artificially inflating their OD.
To demonstrate this, plates of Oligos of various length were tested for concentration in 2 steps:
1) following a deprotection/desalting step only, and 2) following Bio-RP purification. (Fig. 1)

The results of these tests show that the amount of failed sequences and impurities* increases with length (as expected), but the failure product is not removed by deprotection/desalting alone. This results in inflated OD readings for oligos depending on oligo length.
(Table 1)


Figure 1. Plates of Oligos of various length were tested for concentration following desalting and then by Bio-RP cartridge purification.
Note inflated OD readings when deprotection/desalting alone is used.
 

Oligo Length (# bases) 18 - 24 24 - 29 30 - 34 35 - 41
OD Inflation 38% 45% 60% 77%

Table 1. Average OD inflation for oligos of various length when protection/desalting alone is employed v. Bio-RP purified product.
Note for longer oligos; up to 77% of product does not consist of functional oligo.

*Impurities in desalted oligos may include: Acetonitrile, Pyridine, Iodine,
Ethylthiotetrazole, Dichloromethane, Acetic acid, Acrylonitrile, Benzamide and Isobutyramide.


PAGE Oligo Purification

PAGE Oligo purification is recommended for Oligos between 50-100 bases. This results in yields with purity levels exceeding 95%. Subsequently yield obtained is lower than when other purification techniques are applied.

 

HPLC Oligo Purification

HPLC purification can be used for both modified and unmodified oligos up to 50 bases in length. Our HPLC oligo purification always begins with a trityl-on purification, and is often followed by a second full gradient trityl-off HPLC. In some cases, the initial trityl-on purification is entirely sufficient and a cartridge is utilized in the subsequent trityl-off oligo processing. This RP-HPLC purification process can result in yields of highly pure material, especially when the oligonucleotide is not complex. When synthesizing compounds that require post-synthesis modification such as dye labeling, we will apply an additional RP-HPLC oligo purification.






 


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AccuOligo® is Bioneer's patented oligo technology.

AccuOligo® prevents oligo dislodgment and potential loss during packing, shipping and opening through the addition of a patented adhesive to the tube during the production process. Even 96-deep well plate format orders have AccuOligo® technology applied, preventing cross-contamination from occurring during use.
(Patent application. Reg. Number 10-0777249 )

The adhesive does not affect PCR, Sequencing, restriction digests or other experimental methods
Prevention of dislodgment and loss of oligos during production, packaging and shipping
Prevents loss due to oligo "flaking" and tube cap attachment loss
Prevents cross-contamination when using plate formats
Quantified oligos made to order


Bioneer's in-house developed Bio-RP purification system.

Bioneer's R&D team has developed an RP resin for purification, as a superior alternative to standard desalting/deprotection as offered by our competitors. This delivers near-HPLC quality and is provided Free of Charge.
 

Contamination prevention through clean room production.

All oligos manufactured at Bioneer are produced within clean room facilities, ensuring that we provide nuclease/nucleic acid-free product to our customers.
 

Molecular weight-level quality control with accurate MALDI- TOF QC.

Every oligo produced is QC'd using MALDI-TOF and 96-well CE Q.C systems.
A comprehensive QC report is shipped with each oligo to ensure confidence and to ensure that our customers receive only the highest quality products for use in their research.


Ordering Information

Standard Custom
High Throughput
Modified
Dual Labeled Probes
Extendamers™
Large Scale

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siRNA & miRNA


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69 Luteolin, a novel natural inhibitor of tumor progression locus 2 serine/threonine kinase, inhibits tumor necrosis factor-alpha-induced cyclooxygenase-2 expression in JB6 mouse epidermis cells.
Kim JE, Son JE, Jang YJ, Lee DE, Kang NJ, Jung SK, Heo YS, Lee KW, Lee HJ.
J Pharmacol Exp Ther. 2011 Sep;338(3):1013-22.
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68 Modulation of Tcf3 repressor complex composition regulates cdx4 expression in zebrafish.
Ro H, Dawid IB.
EMBO J. 2011 Jun 10;30(14):2894-907.
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67 Romo1 is a negative-feedback regulator of Myc.
Lee SB, Kim JJ, Chung JS, Lee MS, Lee KH, Kim BS, Do Yoo Y.
J Cell Sci. 2011 Jun 1;124(Pt 11):1911-24.
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66 Apurinic/apyrimidinic endonuclease 1 inhibits protein kinase C-mediated p66shc phosphorylation and vasoconstriction.
Lee SK, Chung JI, Park MS, Joo HK, Lee EJ, Cho EJ, Park JB, Ryoo S, Irani K, Jeon BH.
Cardiovasc Res. 2011 Aug 1;91(3):502-9.
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65 Lipid raft-dependent death receptor 5 (DR5) expression and activation are critical for ursodeoxycholic acid-induced apoptosis in gastric cancer cells.
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Carcinogenesis. 2011 May;32(5):723-31.
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Endocrinology. 2011 Mar;152(3):793-803.
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63 Gene expression profile of rat prostate during pubertal growth and maturation.
Gong EY, Park E, Chattopadhyay S, Lee SY, Lee K.
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62 The glutamate agonist homocysteine sulfinic acid stimulates glucose uptake through the calcium-dependent AMPK-p38 MAPK-protein kinase C zeta pathway in skeletal muscle cells.
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61 Estrogen receptor alpha pathway is involved in leptin-induced ovarian cancer cell growth.
Choi JH, Lee KT, Leung PC.
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60 B-MYB positively regulates serine-threonine kinase receptor-associated protein (STRAP) activity through direct interaction.
Seong HA, Manoharan R, Ha H.
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59 Phospholipidosis induced by PPARγ signaling in human bronchial epithelial (BEAS-2B) cells exposed to amiodarone.
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Toxicol Sci. 2011 Mar;120(1):98-108.
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58 KRIBB11 inhibits HSP70 synthesis through inhibition of heat shock factor 1 function by impairing the recruitment of positive transcription elongation factor b to the hsp70 promoter.
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J Biol Chem. 2011 Jan 21;286(3):1737-47.
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57 The early secretory pathway contributes to the growth of the Coxiella-replicative niche.
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55 Overexpression of high-mobility group box 2 is associated with tumor aggressiveness and prognosis of hepatocellular carcinoma.
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54 Parkin directly modulates 26S proteasome activity.
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53 A nonthiazolidinedione peroxisome proliferator-activated receptor α/γ dual agonist CG301360 alleviates insulin resistance and lipid dysregulation in db/db mice.
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52 Cocarcinogenic effect of capsaicin involves activation of EGFR signaling but not TRPV1.
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51 Targeting epidermal growth factor receptor-associated signaling pathways in non-small cell lung
cancer cells: implication in radiation response.
Choi EJ, Ryu YK, Kim SY, Wu HG, Kim JS, Kim IH, Kim IA.
Mol Cancer Res. 2010 Jul;8(7):1027-36.
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50 Histone deacetylase inhibitors synergistically potentiate death receptor 4-mediated apoptotic cell
death of human T-cell acute lymphoblastic leukemia cells.
Sung ES, Kim A, Park JS, Chung J, Kwon MH, Kim YS.
Apoptosis. 2010 Oct;15(10):1256-69.
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49 Inhibition of histone deacetylase attenuates hypoxia-induced migration and invasion of cancer cells via the restoration of RECK expression.
Jeon HW, Lee YM.
Mol Cancer Ther. 2010 May;9(5):1361-70.
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48 Resveratrol inhibits neuronal apoptosis and elevated Ca2+/calmodulin-dependent protein kinase II activity in diabetic mouse retina.
Kim YH, Kim YS, Kang SS, Cho GJ, Choi WS.
Diabetes. 2010 Jul;59(7):1825-35.
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47 Upregulation of SPRR3 promotes colorectal tumorigenesis.
Cho DH, Jo YK, Roh SA, Na YS, Kim TW, Jang SJ, Kim YS, Kim JC.
Mol Med. 2010 Jul-Aug;16(7-8):271-7.
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46 T cell Ig domain and mucin domain 1 engagement on invariant NKT cells in the presence of TCR stimulation enhances IL-4 production but inhibits IFN-gamma production.
Kim HS, Kim HS, Lee CW, Chung DH.
J Immunol. 2010 Apr 15;184(8):4095-106.
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45 Proinflammatory cytokine IL-1beta stimulates IL-8 synthesis in mast cells via a leukotriene B4 receptor 2-linked pathway, contributing to angiogenesis.
Kim GY, Lee JW, Ryu HC, Wei JD, Seong CM, Kim JH.
J Immunol. 2010 Apr 1;184(7):3946-54.
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44 Enhanced anti-tumor effects of combined MDR1 RNA interference and human sodium/iodide
symporter (NIS) radioiodine gene therapy using an adenoviral system in a colon cancer model.

Ahn SJ, Jeon YH, Lee YJ, Lee YL, Lee SW, Ahn BC, Ha JH, Lee J.
Cancer Gene Ther. 2010 Jul;17(7):492-500. Epub 2010 Feb 26.
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43 Role of JNK activation in pancreatic beta-cell death by streptozotocin.
Cheon H, Cho JM, Kim S, Baek SH, Lee MK, Kim KW, Yu SW, Solinas G, Kim SS, Lee MS.
Mol Cell Endocrinol. 2010 Jun 10;321(2):131-7.
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42 Autophagy induction and CHOP under-expression promotes survival of fibroblasts from rheumatoid arthritis patients under endoplasmic reticulum stress.
Shin YJ, Han SH, Kim DS, Lee GH, Yoo WH, Kang YM, Choi JY, Lee YC, Park SJ, Jeong SK, Kim HT, Chae SW, Jeong HJ, Kim HR, Chae HJ.
Arthritis Res Ther. 2010;12(1):R19.
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41 The SDF-1alpha/CXCR4 axis induces the expression of fatty acid synthase via sterol regulatory element-binding protein-1 activation in cancer cells.
Kim K, Kim HY, Cho HK, Kim KH, Cheong J.
Carcinogenesis. 2010 Apr;31(4):679-86.
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40 Ischemia induces regulator of G protein signaling 2 (RGS2) protein upregulation and enhances apoptosis in astrocytes.
Endale M, Kim SD, Lee WM, Kim S, Suk K, Cho JY, Park HJ, Wagley Y, Kim S, Oh JW, Rhee MH.
Am J Physiol Cell Physiol. 2010 Mar;298(3):C611-23.
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39 Endoplasmic reticulum stress-induced activation of activating transcription factor 6 decreases cAMP-stimulated hepatic gluconeogenesis via inhibition of CREB.
Seo HY, Kim MK, Min AK, Kim HS, Ryu SY, Kim NK, Lee KM, Kim HJ, Choi HS, Lee KU, Park KG, Lee IK.
Endocrinology. 2010 Feb;151(2):561-8.
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38 Gene silencing by cell-penetrating, sequence-selective and nucleic-acid hydrolyzing antibodies.
Lee WR, Jang JY, Kim JS, Kwon MH, Kim YS.
Nucleic Acids Res. 2010 Mar;38(5):1596-609.
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37 The tumor suppressor, parafibromin, mediates histone H3 K9 methylation for cyclin D1 repression.
Yang YJ, Han JW, Youn HD, Cho EJ.
Nucleic Acids Res. 2010 Jan;38(2):382-90.
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36 Pro-survival of estrogen receptor-negative breast cancer cells is regulated by a BLT2-reactive
oxygen species-linked signaling pathway.
Choi JA, Lee JW, Kim H, Kim EY, Seo JM, Ko J, Kim JH.
Carcinogenesis. 2010 Apr;31(4):543-51.
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35 Trichostatin A enhances proliferation and migration of vascular smooth muscle cells by downregulating thioredoxin 1.
Song S, Kang SW, Choi C.
Cardiovasc Res. 2010 Jan 1;85(1):241-9.
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34 Essential role of CR6-interacting factor 1 (Crif1) in E74-like factor 3 (ELF3)-mediated intestinal
development.
Kwon MC, Koo BK, Kim YY, Lee SH, Kim NS, Kim JH, Kong YY.
J Biol Chem. 2009 Nov 27;284(48):33634-41.
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33 Rhomboid domain containing 2 (RHBDD2): a novel cancer-related gene over-expressed in breast cancer.
Abba MC, Lacunza E, Nunez MI, Colussi A, Isla-Larrain M, Segal-Eiras A, Croce MV, Aldaz CM.
Biochim Biophys Acta. 2009 Oct;1792(10):988-97.
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32 Phosphorylation status of nuclear ribosomal protein S3 is reciprocally regulated by protein kinase C{delta} and protein phosphatase 2A.
Kim TS, Kim HD, Shin HS, Kim J.
J Biol Chem. 2009 Aug 7;284(32):21201-8.
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31 Inhibition of melanogenesis by tyrosinase siRNA in human melanocytes.
An SM, Koh JS, Boo YC.
BMB Rep. 2009 Mar 31;42(3):178-83.
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30 cIAP1, cIAP2, and XIAP act cooperatively via nonredundant pathways to regulate genotoxic stress-induced nuclear factor-kappaB activation.
Jin HS, Lee DH, Kim DH, Chung JH, Lee SJ, Lee TH.
Cancer Res. 2009 Mar 1;69(5):1782-91.
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29 Cilostazol ameliorates metabolic abnormalities with suppression of proinflammatory markers
in a db/db mouse model of type 2 diabetes via activation of peroxisome proliferator-activated receptor gamma transcription.

Park SY, Shin HK, Lee JH, Kim CD, Lee WS, Rhim BY, Hong KW.
J Pharmacol Exp Ther. 2009 May;329(2):571-9.
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28 Effect of BSA-induced ER stress on SGLT protein expression levels and alpha-MG uptake in renal proximal tubule cells.
Lee YJ, Suh HN, Han HJ.
Am J Physiol Renal Physiol. 2009 Jun;296(6):F1405-16.
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27 Suppression of prostaglandin E2-induced MUC5AC overproduction by RGS4 in the airway.
Song KS, Choi YH, Kim JM, Lee H, Lee TJ, Yoon JH.
Am J Physiol Lung Cell Mol Physiol. 2009 Apr;296(4):L684-92.
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26 Protein phosphatase 5 regulates the function of 53BP1 after neocarzinostatin-induced DNA damage.
Kang Y, Lee JH, Hoan NN, Sohn HM, Chang IY, You HJ.
J Biol Chem. 2009 Apr 10;284(15):9845-53.
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25 Cryptotanshinone inhibits constitutive signal transducer and activator of transcription 3 function
through blocking the dimerization in DU145 prostate cancer cells.

Shin DS, Kim HN, Shin KD, Yoon YJ, Kim SJ, Han DC, Kwon BM.
Cancer Res. 2009 Jan 1;69(1):193-202.
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24 Gene transfer of redox factor-1 inhibits neointimal formation: involvement of platelet-derived growth factor-beta receptor signaling via the inhibition of the reactive oxygen species-mediated Syk pathway.
Lee HM, Jeon BH, Won KJ, Lee CK, Park TK, Choi WS, Bae YM, Kim HS, Lee SK, Park SH, Irani K, Kim B.
Circ Res. 2009 Jan 30;104(2):219-27, 5p following 227. Epub 2008 Nov 26.
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23 The HECT domain of TRIP12 ubiquitinates substrates of the ubiquitin fusion degradation pathway.
Park Y, Yoon SK, Yoon JB.
J Biol Chem. 2009 Jan 16;284(3):1540-9.
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22 Glutathione peroxidase 3 mediates the antioxidant effect of peroxisome proliferator-activated receptor gamma in human skeletal muscle cells.
Chung SS, Kim M, Youn BS, Lee NS, Park JW, Lee IK, Lee YS, Kim JB, Cho YM, Lee HK, Park KS.
Mol Cell Biol. 2009 Jan;29(1):20-30.
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21 The Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylation.
Yoh SM, Lucas JS, Jones KA.
Genes Dev. 2008 Dec 15;22(24):3422-34.
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20 RNA-binding protein hnRNP D modulates internal ribosome entry site-dependent translation of hepatitis C virus RNA.
Paek KY, Kim CS, Park SM, Kim JH, Jang SK.
J Virol. 2008 Dec;82(24):12082-93.
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19 Replicative senescence induced by Romo1-derived reactive oxygen species.
Chung YM, Lee SB, Kim HJ, Park SH, Kim JJ, Chung JS, Yoo YD.
J Biol Chem. 2008 Nov 28;283(48):33763-71.
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18 Bile acid induces expression of COX-2 through the homeodomain transcription factor CDX1 and orphan nuclear receptor SHP in human gastric cancer cells.
Park MJ, Kim KH, Kim HY, Kim K, Cheong J.
Carcinogenesis. 2008 Dec;29(12):2385-93.
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17 Proto-oncogene FBI-1 (Pokemon) and SREBP-1 synergistically activate transcription of fatty-acid synthase gene (FASN).
Choi WI, Jeon BN, Park H, Yoo JY, Kim YS, Koh DI, Kim MH, Kim YR, Lee CE, Kim KS, Osborne TF, Hur MW.
J Biol Chem. 2008 Oct 24;283(43):29341-54.
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16 cAMP-responding element-binding protein and c-Ets1 interact in the regulation of ATP-dependent MUC5AC gene expression.
Song KS, Lee TJ, Kim K, Chung KC, Yoon JH.
J Biol Chem. 2008 Oct 3;283(40):26869-78.
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15 Ceramide accelerates ultraviolet-induced MMP-1 expression through JAK1/STAT-1 pathway in cultured human dermal fibroblasts.
Kim S, Kim Y, Lee Y, Chung JH.
J Lipid Res. 2008 Dec;49(12):2571-81.
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14 The integrin-coupled signaling adaptor p130Cas suppresses Smad3 function in transforming growth factor-beta signaling.
Kim W, Seok Kang Y, Soo Kim J, Shin NY, Hanks SK, Song WK.
Mol Biol Cell. 2008 May;19(5):2135-46.
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13 The AP-2alpha transcription factor is required for the ganglioside GM3-stimulated transcriptional regulation of a PTEN gene.
Choi HJ, Chung TW, Kim SJ, Cho SY, Lee YS, Lee YC, Ko JH, Kim CH.
Glycobiology. 2008 May;18(5):395-407.
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12 Sterol regulatory element-binding protein-1c represses the transactivation of androgen receptor and androgen-dependent growth of prostatic cells.
Suh JH, Gong EY, Kim JB, Lee IK, Choi HS, Lee K.
Mol Cancer Res. 2008 Feb;6(2):314-24.
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11 Proline-rich transcript in brain protein induces stress granule formation.
Kim JE, Ryu I, Kim WJ, Song OK, Ryu J, Kwon MY, Kim JH, Jang SK.
Mol Cell Biol. 2008 Jan;28(2):803-13.
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10 Essential role of mitochondrial function in adiponectin synthesis in adipocytes.
Koh EH, Park JY, Park HS, Jeon MJ, Ryu JW, Kim M, Kim SY, Kim MS, Kim SW, Park IS, Youn JH, Lee KU.
Diabetes. 2007 Dec;56(12):2973-81.
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9 A human scFv antibody against TRAIL receptor 2 induces autophagic cell death in both TRAIL-sensitive and TRAIL-resistant cancer cells.
Park KJ, Lee SH, Kim TI, Lee HW, Lee CH, Kim EH, Jang JY, Choi KS, Kwon MH, Kim YS.
Cancer Res. 2007 Aug 1;67(15):7327-34.
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8 Chemokine stromal cell-derived factor-1 induction by C/EBPbeta activation is associated with
all-trans-retinoic acid-induced leukemic cell differentiation.

Kim KJ, Kim HH, Kim JH, Choi YH, Kim YH, Cheong JH.
J Leukoc Biol. 2007 Nov;82(5):1332-9.
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7 Cytokine-like 1 (Cytl1) regulates the chondrogenesis of mesenchymal cells.
Kim JS, Ryoo ZY, Chun JS.
J Biol Chem. 2007 Oct 5;282(40):29359-67.
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6 Bax inhibitor-1 regulates endoplasmic reticulum stress-associated reactive oxygen species and heme oxygenase-1 expression.
Lee GH, Kim HK, Chae SW, Kim DS, Ha KC, Cuddy M, Kress C, Reed JC, Kim HR, Chae HJ.
J Biol Chem. 2007 Jul 27;282(30):21618-28.
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5 Syk contributes to PDGF-BB-mediated migration of rat aortic smooth muscle cells via MAPK pathways.
Lee CK, Lee HM, Kim HJ, Park HJ, Won KJ, Roh HY, Choi WS, Jeon BH, Park TK, Kim B.
Cardiovasc Res. 2007 Apr 1;74(1):159-68.
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4 An RNA-binding protein, hnRNP A1, and a scaffold protein, septin 6, facilitate hepatitis C virus replication.
Kim CS, Seol SK, Song OK, Park JH, Jang SK.
J Virol. 2007 Apr;81(8):3852-65.
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3 Regulation of Polo-like kinase 1 by DNA damage in mitosis. Inhibition of mitotic PLK-1 by protein phosphatase 2A.
Jang YJ, Ji JH, Choi YC, Ryu CJ, Ko SY.
J Biol Chem. 2007 Jan 26;282(4):2473-82.
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2 Ganglioside GM3 modulates tumor suppressor PTEN-mediated cell cycle progression--transcriptional induction of p21(WAF1) and p27(kip1) by inhibition of PI-3K/AKT pathway.
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Glycobiology. 2006 Jul;16(7):573-83.
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1 Down-regulation of a forkhead transcription factor, FOXO3a, accelerates cellular senescence in human dermal fibroblasts.
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Over 132,000 predesigned siRNA's, also validated and standard siRNA libraries by gene function or family - AccuTarget™


Bioneer's core business has always been the manufacture of DNA and RNA in conventional and breakthrough ways. When RNA interference (RNAi) was discovered, Bioneer was there to help provide researchers with the tools they need to accomplish their experiments. Bioneer is currently the market leader in RNAi technology in Asia, and is launching in North America this year. Our RNAi portfolio consists of six areas:

Predesigned siRNA libraries
PCR primers for knockdown validation
Human validated siRNA libraries
Human siRNA library sets and subsets
Control siRNAs
siRNA design and synthesis

All Bioneer's siRNAs are designed using our Turbo si-Designer software. This software identifies highly effective siRNA target sites with remarkably high knockdown rates. Critical parameters including base composition, thermodynamic instability and base preference are all considered in the design algorithm. siRNAs spanning SNP sites are removed and finally, non-specific siRNAs are eliminated following homology searching by BLAST and Smith-Waterman algorithms. The result is an siRNA with extraordinary knockdown efficiency and minimal off-target effects.We are so confident in our software that we have the best guarantee in the industry – Buy three of our AccuTarget™ siRNAs, and if 2 of them don’t have knockdown rates of at least 80%, we will replace them free of charge!

 

The Bioneer 80% Guarantee

When purchasing 3 siRNAs for the same gene, Bioneer guarantees at least an 80% reduction in the target mRNA level for 2 of the 3 siRNAs. If there is not a > 80% reduction in the mRNA level of the target gene, Bioneer will supply 2 siRNAs free of charge.*

*Bioneer reserves the right to request supporting data inclusive of:
1. Transfection efficiency data: NC (AccuTarget™ Fluorescein-labeled Negative Control) and siRNA concentration at 100 nM
2. siRNA knockdown efficiency data (mRNA level) : PC (AccuTarget™ GAPDH/GFP/Luciferase siRNA) and NC (AccuTarget™ Negative Control)
 

Features and Benefits

 

  • Performance Guarantee: When purchasing 3 siRNAs for the same gene, Bioneer guarantees at least an 80% reduction* in the target mRNA level for 2 of the three siRNAs.
  • Purification: For your more demanding applications, Bioneer's automated HPLC and Bio-RP purification methods ensure high quality, high- throughput siRNAs at an affordable price.
  • Affordable pricing: Bioneer provides a variety of high quality siRNA products at an affordable price.
  • Synthesis and QC: Bioneer siRNAs are produced in clean room facility by fully automated high-throughput siRNA production system. Bioneer siRNA products are assessed by MALDI-TOF Mass spectrometry analysis. Mass spec data is provided with every siRNA. Additionally, siRNAs are tested by gel electrophoresis to verify that both RNA strands annealed properly.

 

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Introduction

Until recently, gene knockdown or knockout technologies, such as antisense, ribozyme, and gene knockouts were used to perform loss-of-function studies. However, the post-genomics era calls for high-throughput gene function studies which the former technologies were unable to answer due to poor reproducibility, high cost, and excessive time to results. The advent of siRNA technology has opened up many new possibilities in the field of gene suppression.
 

siRNA Mechanism

siRNA is the term for 20 - 25-base pair RNA duplexes, where the two terminal 3'-nucleotides are unpaired (3' overhang). When siRNAs are introduced into cells they combine with a protein complex called the RNA-induced silencing complex (RISC) and are unwound by a helicase. The RISC complex containing single stranded RNA complementary to the target mRNA then recognizes and binds to the target mRNA. After binding the mRNA, the argonaute protein Ago2 cleaves it and complete degradation of the target mRNA is carried out by ribonuclease activity (as a result of the lack of protection by 5' caps or poly (A) tails). This exciting technology is one of the most effective methods for the silencing of specific target genes and is a must for gene function validation studies, drug target validation, and for gene therapy studies. siRNA has the following advantages over other RNAi technology:

• Reduced time and costs: Less screening is needed to obtain highly effective siRNA.
• High efficacy at lower concentration: lower concentrations provide effective gene silencing and minimizes off target effects
• Specificity: siRNA is a highly specific target knockout mechanism based on the natural biological mechanisms of RNAi


Bioneer manufactures high quality and cost-effective siRNA. Every siRNA is produced in an automated high-throughput RNA production system under clean room conditions and undergo rigorous QC tests.

All Bioneer siRNAs are provided as double-stranded siRNA. Each sense siRNA and an antisense RNA are QC'ed by MALDI-TOF. Every annealed siRNA is then QC-tested using PAGE to confirm proper annealing.


Figure 1. MALDI-TOF mass spectrometry analysis of a custom siRNA. All siRNAs are processed by MALDI-TOF mass spectrometry to ensure its quality.


Figure 2. PAGE data of double-stranded custom siRNA. Complementary single-stranded RNA strands were hybridized to form siRNA duplex and analyzed by 15% non-denaturing PAGE.
SS: single-stranded RNA
DS: double-stranded siRNA


Figure 3. Confocal microscopic image of HeLa cells transfected with FITC-labeled negative control siRNA (Cat No.: SN-1021). The fluorescent cells indicate that the HeLa cells were successfully transfected with the siRNA.


Figure 4. Effects of Human GAPDH Positive Control siRNA. HeLa cells were transfected separately with AccuTarget Human GAPDH Positive Control and Negative Control siRNA using Lipofectamine 2000 (Invitrogen) at a final concentration of 100 nM. Total cellular RNA was isolated from cells 24 hours after transfection and subjected to Northern blot and Real-Time PCR analysis. As can be seen from Fig. 1-B, about 3% GAPDH mRNA remained.


Notice to Purchaser

All siRNA Products: For Research Use Only. Not For Use in Diagnostic Procedures.


Limited License

This product is licensed under European Patents 1144623, 121945 and foreign equivalents from Alnylam Pharmaceuticals, Inc., Cambridge, USA and is provided only for use in academic and commercial research whose purpose is to elucidate gene function, including research to validate potential gene products and pathways for drug discovery and development and to screen non-siRNA based compounds (but excluding the evaluation or characterization of this product as the potential basis for a siRNA-based drug) and not for any other commercial purposes. Information about licenses for commercial use (including discovery and development of siRNA-based drugs) is available from Alnylam Pharmaceuticals, Inc., 300 Third Street, Cambridge, MA 02142, USA.

This product is sold for research use only and is not to be administered to humans or used for medical diagnostics. Buyer acknowledges and agrees that all intellectual property rights in the products (including, without limitation, the siRNA sequences used to create such products) and in any Bioneer technology, intellectual property and know-how used to make or useful for the manufacture or use of the products will at all times remain vested in Bioneer (other than any ownership interest that buyer may have in non-public proprietary target genes supplied by buyer to Bioneer in connection with custom products).

Trademark: AccuTarget is a trademark of Bioneer Corporation.







 


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Synthesis and Order

Q1. How is siRNA synthesized?

The most commonly used method in siRNA synthesizers is the 'phosphite triester' method, developed by Koster. This method builds the phosphodiester backbone of the RNA molecule by using β-cyanoethyl phosphoramidites. (Nucl. Acids Res. 1984, 12, 4539 ; Tetrahedron Lett. 1983, 24,5843) The synthesis begins with a solid support (CPG) with an attached starter nucleoside. A deblocking-coupling-capping-oxidation cycle is repeated to reach the desired length of siRNA molecule. After synthesis, ammonia is used to detach the siRNA from the solid support. The siRNA then undergoes deprotection and TBDMS treatment before being purified. The end result of these processes is pure siRNA. Each synthesized ss-RNA is annealed to produce the final duplexed siRNA form.

Q2. How do I order pre-designed siRNAs?

The AccuTarget Genome-wide Predesigned siRNAs are designed for Human, Mouse and Rat genomes. The desired target can be searched by Symbol, Gene No, Refseq accession Number or Description. Each query will yield three (3) candidates with the highest predicted efficiency score. You may select the desired quantity at that point. Also, you may select purification type and the guaranteed nmole quantity as well.

Q3. When can I expect delivery?

Delivery depends on the AccuTarget product that is ordered. Custom siRNA orders can be made and delivered in 10 business days. AccuTarget Predesigned siRNA can be delivered within 5 days of order receipt. Library products, orders of < 10 96-well plates can be shipped within 3 days of order receipt, and shipping dates for higher quantities above that will have to be discussed on a case-by-case basis.

Q4. Up to how many bases can Bioneer synthesize?

Bioneer offers single strand RNA synthesis service up to 50mers. (not siRNA) The same price is applied up to 30mer siRNA including overhang.

Q5. What form will my order be in?

For Genome-Wide Predesigned siRNAs, Validated siRNAs, siRNA Libraries and Control siRNAs, both the sense and antisense strands are synthesized at equimolar concentrations, verified via MALDI-TOF, then annealed and delivered in duplexed, lyophilized form. You may reconstitute the siRNA with a buffer of your choice or with ultrapure water that we provide with every order. We recommend reconstituting to 100 μM. For Custom siRNA orders, the order is processed by the same method as above. We recommend 50 μM reconstitution for Custom siRNA orders. When ordering Custom siRNA you must select the "Annealing Service" to receive your order in annealed form. If you choose not to use our annealing service, you can use 1X annealing buffer and follow the annealing protocol included with your Custom siRNA order.

Q6. I want to conduct an in vitro experiment. What scale should I choose? What purification should I select?

With a 10 nmole scale siRNA order, you can transfect one hundred (100) 96-well plates at 100 nM per transfection. Unless you are planning to conduct an in vivo experiment, the Bio-RP Purification will yield outstanding results. We recommend HPLC purification for in vivo experimental use.

Q7. Can Bioneer synthesize chimeric RNA?

Yes we can. We have the ability to synthesize chimeric RNA molecules that incorporate dA, dC, dG, and dT DNA bases. We can also incorporate 2'-O-Methyl and 2'-F(rU, rC) into the RNA.

Q8. I would like to order over four (4) siRNA candidates for a single gene. How do I order?

Our Genome-wide predesigned siRNAs provide three (3) candidates per target gene. In order to request more than four (4) candidates, order via Custom siRNA request. The siRNA sequences can be verified only after the order has been submitted. If you would like to compare the sequences with publications or to modify your order, please email us

Q9. The Genome-wide predesigned siRNA didn't work like I expected. What do I do?

When purchasing 3 siRNAs for the same gene, Bioneer guarantees at least an 80% reduction in the target mRNA level for 2 of the 3 siRNAs. If there is not a > 80% reduction in the mRNA level of the target gene, Bioneer will supply 2 siRNAs free of charge* when the customer provides the experiment information.

Q10. Are phosphate groups present on the 5' or 3' ends of the synthesized siRNA?

Unless explicitly stated, the 5' and 3' ends are capped with -OH groups. Therefore, to order 5' phosphate-capped siRNAs, you must request for 5' phosphorylation modification. 
 

Modified siRNA

Q1. What types of modified siRNAs are there?

In order to maximize siRNA applications, modified* siRNAs are available. Although there are many ways to modify siRNAs, the most convenient method is to use phosphoramidites to label siRNAs during synthesis. For a 5' siRNA modification, synthesis is first conducted as normal. At the final stage, however, a labeling phosphoramidite is attached to the 5' end, resulting in a 5' labeled siRNA. 3' labeling is somewhat complicated in that we must start with a labeled phosphoramidite attached to a solid support and build the molecule from there. You can incorporate the label of your choice to the siRNA sequence by using a labeled phosphoramidite at the 5' end of deoxyuridine, therefore allowing for an internal modified siRNA.

The following modifications are offered for our siRNAs.
5' Amine - 3' amine modification
• 5' Phosphorylation & 3' phosphorylation
• 5' Thiol - 3' Thiol Modification
• 5' Biotin - Internal Biotin-dT Modification
• 5' Fluorescein - 3' Fluorescein modification
• 3' TAMRA modification

*Certain items may not be available in all countries.
 

Handling and Storage

Q1. How to I store my siRNAs and how long do they keep?

siRNAs can normally be kept stable at -20°C for over 1 year. The lyophilized form is especially stable and has a long shelf-life. Although solution-dissolved siRNAs can be stable, contamination of the reconstitution solution with RNase will degrade the product. Also, repeated freeze-thaw cycles accelerate the degradation process. Therefore, we recommend that after you receive the siRNA stock, you reconstitute and make several aliquots to avoid such freeze-thawing. Because the phosphodiester bonds of the RNA can break under high pH conditions, we ask you to take caution, and recommend reconstituting in ultrapure water provided.

Q2. How do I reconstitute my siRNA?

If you would like to keep your siRNA in solution, we recommend reconstituting with DEPC-treated water that we provide with your order to maximize stability.

Q3. How to I store my fluorescent dye modified siRNA?

Photobleaching may occur if the fluorescent dye modified siRNA is exposed to light for prolonged periods of time. Therefore we recommend that you store such siRNAs in a dark container and store that container in a dark place.
 

Purification

Q1. I would like to know how the synthesized siRNA is purified.

To purify newly synthesized siRNA, we have several methods including Bio-RP and HPLC. We select a purification method depending on the end-use of the product:

1. Bio-RP: Phosphoramidites used for siRNA synthesized with the Bio-RP synthesizer have a DMT group protecting the 5' end to prevent accessory reactions from occurring during synthesis. If the DMT group is not removed at the end of the synthesis cycle ('trityl-on' mode), only the desired length N-mer siRNA will have the 5'-DMT group, while the shorter N-1, N-2 etc. synthesis by-products will not have a DMT group attached. Because the DMT group is extremely hydrophobic, it will interface very well with the RP resin. By taking advantage of this fact, and the fact that DMT groups are not present in the N-1, N-2 etc. by-products, we are able to efficiently purify the desired N-mer siRNA. Unless intended for in vivo experiments, the Bio-RP Purification method will yield excellent experimental results.

2. HPLC: For experiments requiring extremely pure siRNAs such as in vivo experiments, Bio-RP purification may be insufficiently pure. In this case, HPLC is commonly used to reach the desired purity level. We use a reversed-phase resin for purification, and this will routinely yield up to 98% purity for 21-mer siRNA molecules. We recommend selecting HPLC purification if you are intending to use the siRNA for in vivo experiment use.
 

Quantification and Concentration

Q1. What does the O.D. value mean?

Because the amount of synthesized siRNA is extremely small, it is very difficult to quantify by weight. Therefore, we capitalize on the light-absorption properties of nucleic acids to indirectly measure the amount of product. The amount of light absorbed by a given amount of product is expressed as an O.D. (Optical Density) value, and is directly related to the amount of product in solution.

Q2. How do I calculate the amount of siRNA from the O.D. value?

After measuring the amount of 260 nm light absorbed by the siRNA, the following formula is used to calculate the actual amount of siRNA O.D. = εC. The ε is the extinction coefficient which is unique for different materials, and the C stands for the siRNA concentration. If one knows the extinction coefficient and the O.D. value of the siRNA, the concentration can be calculated by substituting those values in the formula above. The ε value for an siRNA molecule is the sum of the extinction coefficient of each base constituting the molecule. The extinction coefficients for each base at 260 nm is are as follows:

rG : 11.5 ml/μmole
rC : 7.2 ml/μmole
rA : 15.4 ml/μmole
rU : 9.9 ml/μmole

Therefore, the extinction coefficient for the entire siRNA molecule can be calculated by multiplying the number of bases by the corresponding extinction coefficient and adding all four products together.

Q3. If my 18-mer siRNA (3G, 4C, 5A, 6U) O.D. value was 0.7, then how much siRNA do I have?

Let's start by calculating the extinction coefficient (εε) of the entire siRNA molecule. ε= 11.5 x 3 + 7.2 x 4 + 15.4 x 5 + 9.9 x 6 = 199.7 (ml/μmole) Therefore, using the O.D. = εC formula, we can calculate the final concentration C to be C = 0.7 /199.7 = 0.0035 (μmole/ml) = 3.5 (nmole/ml). This value is expressed as the 'total nmole' value in your copy of the oligo synthesis report.

Q4. How do I calculate the molecular weight of the synthesized siRNA molecule?

Substitute the number of each base into the following formula: M.W. = (NA x 329.208) + (NC x 305.183) + (NG x 345.207) + (NU x 306.168) - 63.98) + 2.016 NA = Total number of rA NC = Total number of rC NG = Total number of rG NU = Total number of rU

Q5. Can I know how many ng the synthesized product is?

Normally, we will fulfill an order with a guaranteed nmole amount, and the synthesis report will also report the final amount in nmoles. If you must have the ng amount to calculate for an experiment, you can convert from nmole to ng by using the formula below. We make it easy for you by giving you the molecular weight of the siRNA sequence in the report. Molecular Weight (g) X mole (nmole) = Mass of siRNA (ng)
 

Q6. How do I reach a target concentration?

Each synthesis report gives you a 'volume for 100 pmole/μl' value that stands for the volume of DEPC-treated water you need to add to achieve a 100 pmole/μl concentration. As an example, if the 'volume for 100 pmole/μl' values for two siRNAs are 100 and 200, then you can reconstitute with 100μl and 200 μl of DEPC-treated water, respectively, to reach a 100 pmole/μl concentration.
In other words, the siRNA contained in each tube is:
100 μl x 100 pmole/μl = 10,000 pmole = 10 nmole,
200 μl x 100 pmole/μl = 20,000 pmole = 20 nmole
Although the final use will dictate the concentration of siRNA, we found that for average use, 100 pmole/μl is ideal. That is why we provide you with DEPC-treated water volume for reconstitution to 100 pmole/μl.

Q7. How do I convert between morlarity and moles?

The standard concentration units for oligomers is given in M (mole/L), and the prefixes such as μ (micro), n (nano), p (pico) etc. describe the scope of the unit. The following prefixes are used not only for M, but for other measurement units such as length, mass etc.

10-1 = deci [d] 101 = deca [da]
10-2 = centi [c] 102 = hecto [h]
10-3 = milli [m] 103 = kilo [k]
10-6 = micro [μ] 106 = mega [M]
10-9 = nano [n] 109 = giga [G]
10-12 = pico [p] 1012 = tera [T]
10-15 = femto [f] 1015 = peta [P]
10-18 = atto [a] 1018 = exa [E]
10-21 = zepto [z] 1021 = zetta [Z]
10-24 = yocto [y] 1024 = yotta [Y]

1 pmole/μl
= 1x10-12 mole / 1x10-6 L
= 1x10-6 mole/L
= 1 μmole/L
= 1 μM

Therefore, μM and pmole/μl are one and the same.
 

Experiments

Q1. What are some precautions for a siRNA experiment?

First, because not all siRNAs will knock-down the target gene with identical efficiency, you should try 2-3 different sequences to find the best siRNA. Second, to make sure that the knock-down affects downstream protein expression, mRNA levels should also be measured. Thirdly, verify the knock-down phenotype by using another siRNA designed for the same target gene and show that the same phenotype appears.

Q2. This is my first siRNA experiment. How do I set my experimental conditions?

One of the most important factors in a siRNA experiment is the assessment of whether the siRNA gets delivered into the cell. Bioneer offers positive controls that can easily indicate whether the siRNA is being delivered successfully.

Q3. To what cell density should I culture my cells before siRNA transfection?

For siRNA transfection, we recommend that the cell density be approximately 60-70%. (HeLa cell, 6-well plate standard: 1.5 x 105 cells/well. We also strongly encourage user optimization of these figures)

Q4. What concentration of siRNA should I use for transfection?

We recommend a starting concentration of 100 nM (100 pmol/well), but strongly advise empirical optimization for the cell line and conditions of your experiment.

Q5. How do I use 10 nmole of siRNA to transfect cells at 100 nM?

This is a source of confusion for many people. In order to transfect a single well with 100 nM siRNA where the transfection volume is 1 ml, you need 100pmole of siRNA. 2 µl of 50 µM (50 pmole/μl) stock siRNA solution in 1 ml will yield 100 pmole. If you were to order 10 nmole of a siRNA, it will be sufficient to transfect 100 wells at 100 nM (100 pmole/ml).

Q6. What transfection reagent do I use?

Because each cell line will have different transfection efficiencies for every transfection agent, we recommend that you select the transfection reagent most suitable for your cell line.

Q7. How do I verify my siRNA transfection efficiency?

You can easily verify the transfection efficiency by transfecting your cells with NC-FITC and observing the cells with a fluorescence microscope. The NC-FITC can also be used as a test reagent to optimize the transfection concentrations of both the siRNA and the transfection reagent.

Q8. Is there a way to know my siRNA's knockdown efficiency beforehand?

The predicted siRNA knockdown efficiency can be seen at the target gene search screen by clicking the siRNA Number. Validated siRNA efficiencies will be presented in blue, while predesigned siRNA efficiencies will be displayed in grey.

Q9. What controls are used for a siRNA experiment?

The AccuTarget Negative Control siRNA is a non-targeting siRNA that has low sequence homology to all known Human, Rat and Mouse sequences. Therefore, it can be used as a convenient negative control for all Human, Rat and Mouse siRNA experiments. The AccuTarget™ Positive Control siRNAs (human) shows great knockdown efficiency for the target gene. We target GAPDH as an endogenous control gene, and also have positive control siRNAs for reporter systems such as GFP and Luciferase.

Q10. How do I verify the siRNA knockdown efficiency?

The siRNA knockdown efficiency can be verified through various techniques including qPCR, Northern Blot, Western Blot etc.

Q11. What are AccuTarget Genome-wide Predesigned siRNAs?

These siRNAs were predesigned for your convenience using our Turbo si-Designer, a siRNA design algorithm co-developed by us and KRIBB (Korea Research Institute of Bioscience & Biotechnology). Using this revolutionary algorithm, we have constructed a high-knockdown efficiency AccuTarget Genome-wide Predesigned siRNA database. As of this writing, our website contains predesigned siRNAs for Human (17,842 genes), Mouse (17,117 genes), and Rat (9,392 genes).

Q12. What are AccuTarget validated siRNAs?

After synthesizing siRNAs using our Turbo si-Designer, a siRNA design algorithm co-developed by us and KRIBB (Korea Research Institute of Bioscience & Biotechnology), AccuTarget Validated siRNAs have been measured for knockdown efficiency using qPCR. We verified that each siRNA shows at least a 70% knockdown efficiency. AccuTarget Validated siRNAs can be ordered with their corresponding real-time qPCR primer sets. Also, if you order 10 or more siRNAs, they will be delivered in flexible siRNA Library (tube or plate type) format. 

Q13. Can I order siRNAs argeted for a specific gene?

You may order siRNAs for the target gene of your choice by entering the gene name or Accession number at our website and selecting one of the listed siRNA candidates. You may also order custom designed siRNA if your model organism is not Human, Mouse or Rat.

Q14. What are precautions for handling siRNA?

- Wear gloves and a mask when handling siRNA.
- Always use RNase free tubes and pipette tips.
- Only use DEPC treated water when diluting siRNA.
- Store fluorescence-labeled siRNA in a dark location.
 
 

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Protein Expression and Purification


A line of instrumentation and kits designed for synthesis and purification of high-quality protein – rapidly and easily

With the latest technology and years of experience designing and manufacturing products for protein synthesis and purification, Bioneer is pleased to showcase our Accu- and Exi- series products for protein science. These products are designed to simplify your protein work in a cost-effective way.
 

At the cutting edge, Bioneer has recently launched the world's first automated protein synthesis/purification and nucleic acid purification system: ExiProgen.
ExiProgen™ makes protein synthesis and purification as easy as a thermal cycler makes PCR. In order to achieve this ease of use, we have developed the ExiProgen™ EC1 Protein Synthesis Kit for cell-free in vitro protein expression and purification. The technology is based on the AccuRapid™ Cell-Free Protein Expression Kit and Ni-NTA magnetic beads used in our AccuPrep® His-tagged Protein Purification Kit. The ExiProgen™ EC1 Protein Synthesis kit is able to express and purify up to 16 unique proteins in parallel in less than 6 hours.

BIONEER's line of protein-related products not only perform standard protein expression and purification, but also provide an automated system on which to perform the tasks, providing the optimal solution needed to enter the Bio 2.0 era.

All protein-related products are mass produced under a one-batch system governed by ISO 9001 quality standards for world-class results and utmost reproducibility.

Features and Benefits

ExiProgen™/ExiProgen™ EC1 Protein Synthesis Kit

Fully automatic: DNA-in-Protein-out:
ExiProgen™ EC1 Kit and AccuRapid™ Cell-Free Protein Expression Kit require only the addition of template DNA which can be in to form of an expression vector such as pBIVT or a PCR product as can be made with the ExiProgen ProXpress PCR Template Kit.

Parallel Process
Obtain from 1 to 16 different proteins in a single run.

High performance
All systems allows for synthesis of proteins that are toxic to in vivo expression systems.

Reproducibility
The only hands-on step is the addition of template DNA, maximizing reproducibility.

Fast procedure
The in vitro (cell-free) protein synthesis system does not require time-consuming cell culture processes.
 

AccuRapid™ Cell-Free Protein Expression Kit/ ExiPrep™ & AccuPrep® His-tagged Protein Purification Kit

High-speed
AccuRapid™ Cell-Free Protein Expression Kit reactions are carried out in just 3 hours. His-Tag purification can be accomplished in 30 minutes!

Simplicity
The AccuRapid™ Cell-Free Protein Expression Kit contains all necessary components for transcription and translation. Simply add template and incubate!

Flexible
The AccuRapid™ Cell-Free Protein Expression Kit can synthesize proteins from various DNA templates.

SSMB (Spherical Shape Magnetic Beads) for His-Tag purification
SSMB beads have increased surface area by virtue of their size and eliminate the carryover problems of rough surfaced magnetic particles.

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  Accu- series for manual method Exi- series for automated method
Protein Expression AccuRapid™ Cell-Free Protein Expression Kit ExiProgen™ EC1 Protein Synthesis Kit
Protein Purification AccuPrep® His-tagged Protein Purification Kit ExiProgen™ His-tagged Protein Purification Kit


1. Accu- series: Accu- series products are designed for manual workflows.

AccuRapid™ Cell-Free Protein Expression Kit
This product is an adaptation of a cell-free protein expression system.
It includes all necessary components for successful in vitro protein expression. A total of twenty-four (24) 45uL volume reactions are possible with this product.

AccuPrep® is-tagged Protein Purification Kit
This kit is designed for the convenient purification of Histidine-tagged proteins from E. coli lysate.
Purification is based on Ni-NTA magnetic beads for magnetic or centrifugal purification.

 

2. Exi- series: ExiProgen series products are designed for Bioneer's automated systems (ExiProgen™).

ExiProgen™ EC1 Protein Synthesis kit
This product is designed to yield world-class protein synthesis performance when combined with the world’s first automated protein synthesis and nucleic acid purification system ExiProgen™. Up to 16 different proteins can be expressed and purified simultaneously within 6 hours of adding template DNA, and automation means that the results will be reproducible run after run.

ExiProgen™ His-tagged Protein Purification Kit
This product is designed for the purification of up to 16 His-tagged proteins simultaneously within 30 minutes with excellent reproducibility from automation

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Ladders and Markers


Room temperature stable, ready-to-load DNA Ladders and Molecular Weight Markers available

Bioneer offers a wide range of room temperature stable, ready-to-load DNA ladders as well as molecular weight markers for electrophoresis. Our ladders contain bands ranging from 10 bp to 10,000 bp, and our markers have bands from 125 bp to 23,000 bp.
The number of fragments generated by each DNA marker, as well as the specific fragment sizes for each of the conventional markers can be found in our selection guide, or on the specific product page.

 

Features and Benefits

  • Convenient: Both ladders and markers provided ready-to-load
  • Robust stability: Stable for 4 months at room temperature
  • Broad range of products available: You are sure to find one that meets your needs
  • Manufactured with strict control standards: Uniform and sharp band intensities
  • Competitive pricing: Great value for your research dollar

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Specifications of Bioneer Ladders and Markers

                 Product Name                         No. of Bands Smallest Fragment Largest Fragment
10bp DNA ladder                         9 10 bp 100 bp
25/100 bp Mixed DNA Ladder 17 25 bp 2,000 bp
100 bp DNA Ladder 13 100 bp 2,000 bp
100 bp Plus DNA Ladder 19 100 bp 10,200 bp
1 kb DNA Ladder 10 500 bp 10,200 bp
Lambda DNA / EcoR I Marker 6 3,530 bp 21,226 bp
Lambda DNA / Hind III Marker 8 125 bp 23,130 bp
Lambda DNA / EcoR I + Hind III     Marker                                              13 125 bp 21,226 bp
Acculadder 100bp DNA size marker 13 100 bp 2,000 bp
Acculadder 1Kb DNA size marker 10 500 bp 10,200 bp
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Yeast Genome-Wide Library


S. pombe Genome-wide Deletion Mutant Library

The world's first S. pombe Genome-wide Deletion Mutant Library
This genome-wide S. pombe deletion collection covers more than 98% of genome consisting of 4,914 genes. As each deletion strain has its distinct tags, functional analysis can be performed both in a gene-specific manner and a genome-wide scale. Two different sets of mutant collections are available: h+ haploids and h+/ h+ diploids.


S. cerevisiae VN-Fusion Library

Powerful Tool for Protein-Protein Interaction Analysis
The yeast Saccharomyces cerevisiae(S. cerevisiae) is a recognized simple eukaryote model system which genome can be easily manipulated. The S. cerevisiae VN-Fusion Library was created by Dr. Won-Ki Huh of Seoul National University (Korea). The VN-Fusion Library consists of 5,809 VN-tagged Open Reading Frames (ORFs) covering 93% of the yeast proteome.

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Product     Reference                                            
Name                                                                                                                               
Information              Link
S. pombe Stc1: A Critical Link between RNAi and Chromatin Modification Required for Heterochromatin Integrity Elizabeth H. Bayne, Sharon A. White, Alexander Kagansky, Dominika A. Bijos, Luis Sanchez-Pulido, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Chris P. Ponting, Juri Rappsilber and Robin C. Allshire Cell. 2010 Mar 5;140(5):666-77. More
S. pombe Global fitness profiling of fission yeast deletion strains by barcode sequencing Tian Xu Han, Xing-Ya Xu, Mei-Jun Zhang, Xu Peng, and Li-Lin Du Genome Biol. 2010; 11(6): R60. More
S. pombe Improved tools for efficient mapping of fission yeast genes: identification of microtubule nucleation modifier mod22-1 as an allele of chromatin-remodelling factor gene swr1 Andreas Anders, Stephen Watt, Jürg Bähler, and Kenneth E Sawin Yeast 2008 December; 25(12) 913–925 More
S. pombe Functional Genomics of Adhesion, Invasion, and Mycelial Formation in Schizosaccharomyces pombe James Dodgson, Hema Avula, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Jacqueline Hayles, and John Armstrong Eukaryot Cell. 2009 August; 8(8): 1298–1306 More
S. pombe Calnexin Is Involved in Apoptosis Induced by Endoplasmic Reticulum Stress in the Fission Yeast Renée Guérin, Geneviève Arseneault, Stéphane Dumont, and Luis A. Rokeach Mol Biol Cell. 2008 October; 19(10): 4404–4420. More
S. pombe Critical Functions of Rpa3/Ssb3 in S-Phase DNA Damage Responses in Fission Yeast Santiago Cavero, Oliver Limbo, and Paul Russell PLoS Genet. 2010 September; 6(9): e1001138. More
S. pombe Genomic Binding Profiling of the Fission Yeast Stress-Activated MAPK Sty1 and the bZIP Transcriptional Activator Atf1 in Response to H2O2 Majid Eshaghi, Jong Hoon Lee, Lei Zhu, Suk Yean Poon, Juntao Li, Kwang-Hyun Cho, Zhaoqing Chu, R. Krishna M. Karuturi, and Jianhua Liu PLoS One. 2010; 5(7): e11620. More
S. pombe The Cell Surface Protein Gene ecm33+ Is a Target of the Two Transcription Factors Atf1 and Mbx1 and Negatively Regulates Pmk1 MAPK Cell Integrity Signaling in Fission Yeast Hirofumi Takada, Aiko Nishida, Mitsuhiro Domae, Ayako Kita, Yuki Yamano, Atsushi Uchida, Shunji Ishiwata, Yue Fang, Xin Zhou, Takashi Masuko, Mitsuhiro Kinoshita, Kazuaki Kakehi, and Reiko Sugiura* Mol Biol Cell. 2010 February 15; 21(4): 674–685. More
S. pombe Expression profiling of S. pombe acetyltransferase mutants identifies redundant pathways of gene regulation Rebecca L Nugent, Anna Johnsson, Brian Fleharty, Madelaine Gogol, Yongtao Xue-Franzén, Chris Seidel, Anthony PH Wright, and Susan L Forsburg BMC Genomics. 2010; 11: 59. More
S. pombe Genome-Wide Screen of Genes Required for Caffeine Tolerance in Fission Yeast Isabel A. Calvo, Natalia Gabrielli, Iván Iglesias-Baena, Sarela García-Santamarina, Kwang-Lae Hoe, Dong Uk Kim, Miriam Sansó, Alice Zuin, Pilar Pérez, José Ayté, and Elena Hidalgo PLoS One. 2009; 4(8): e6619. More
S. pombe Inter-Species Complementation of the Translocon Beta Subunit Requires Only Its Transmembrane Domain Alexandre Leroux and Luis A. Rokeach PLoS ONE. 2008; 3(12): e3880. More
S. pombe A Genome-Wide Screen of Genes Involved in Cadmium Tolerance in Schizosaccharomyces pombe Patrick J. Kennedy, Ajay A. Vashisht, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Jacqueline Hayles, and Paul Russell Toxicol Sci. 2008 November; 106(1): 124–139. More
S. pombe A Genetic Engineering Solution to the “Arginine Conversion Problem” in Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC)* Claudia C. Bicho, Flavia de Lima Alves, Zhuo A. Chen, Juri Rappsilber, and Kenneth E. Sawin Mol Cell Proteomics. 2010 July; 9(7): 1567–1577. More
S. pombe Plasmid Construction Using Recombination Activity in the Fission Yeast Schizosaccharomyces pombe Ayako Chino, Kenji Watanabe, and Hisao Moriya PLoS One. 2010; 5(3): e9652. More
S. pombe Understanding cytokinesis: lessons from fission yeast Thomas D. Pollard and Jian-Qiu Wu Nat Rev Mol Cell Biol. Author manuscript; available in PMC 2010 August More
S. pombe An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe Hyun-Soo Kim, Vincent Vanoosthuyse, Jeffrey Fillingham, Assen Roguev, Stephen Watt, Thomas Kislinger, Alex Treyer, Laura Rocco Carpenter, Christopher S. Bennett, Andrew Emili, Jack F. Greenblatt, Kevin G. Hardwick, Nevan J. Krogan, Jürg Bähler, and Michael-Christopher Keogh* Nat Struct Mol Biol. Author manuscript; available in PMC 2010 June 1. More
S. pombe Functional Differentiation of tbf1 Orthologues in Fission and Budding Yeasts Moira M. Cockell, Libera Lo Presti, Lorenzo Cerutti, Elena Cano Del Rosario, Philippe M. Hauser, and Viesturs Simanis Eukaryot Cell. 2009 February; 8(2): 207–216. More
S. pombe Functional Characterization of Pneumocystis carinii brl1 by Transspecies Complementation Analysis Libera Lo Presti, Moira Cockell, Lorenzo Cerutti, Viesturs Simanis, and Philippe M. Hauser Eukaryot Cell. 2007 December; 6(12): 2448–2452. More
S. pombe The JmjC domain protein Epe1 prevents unregulated assembly and disassembly of heterochromatin Sarah C Trewick, Elsa Minc, Richard Antonelli, Takeshi Urano, and Robin C Allshire EMBO J. 2007 November 14; 26(22): 4670–4682. More
S. pombe Specific functions for the fission yeast Sirtuins Hst2 and Hst4 in gene regulation and retrotransposon silencing Mickaël Durand-Dubief, Indranil Sinha, Fredrik Fagerström-Billai, Carolina Bonilla, Anthony Wright, Michael Grunstein, and Karl Ekwall EMBO J. 2007 May 16; 26(10): 2477–2488. More
S. pombe Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes Scott J. Dixon, Yaroslav Fedyshyn, Judice L. Y. Koh, T. S. Keshava Prasad, Charly Chahwan, Gordon Chua, Kiana Toufighi, Anastasija Baryshnikova, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim Han-Oh Park, Chad L. Myers, Akhilesh Pandey, Daniel Durocher, Brenda J. Andrews, and Charles Boonea Proc Natl Acad Sci U S A. 2008 October 28; 105(43): 16653–16658. More
S. pombe Screening a genome wide S. pombe deletion library identifies novel genes and pathways involved in the DNA damage response Gaurang P. Deshpande, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, and Edgar Hartsuiker DNA Repair (Amst). 2009 May 1; 8(5): 672–679. More
S. pombe S. pombe genome deletion project An update Mario Spirek, Zsigmond Benko, Martina Carnecka, Cornelia Rumpf, Lubos Cipak, Monika Batova, Ivana Marova, Miyoung Nam, Dong-Uk Kim, Han-Oh Park, Jacqueline Hayles, Kwang-Lae Hoe, Paul Nurse, and Juraj Gregan Cell Cycle. 2010 June 15; 9(12): 2399–2402. More
S. pombe Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe Kim DU, Hayles J, Kim D, wood V. Park HO, Won M, Yoo Hs, Duhig T, Nam M, Palmer G, Han S, Jeffery L, BaekST, Lee H, Shim YS, Lee M, Kim L, Heo KS, Noh EJ, LeeAR, Jang YJ, Chung KS, Choi SJ, Park JY, Park Y, Kim HM, Park SK, Park Hj, Kang EJ, Kim HB, Kang HS, Park HM, Kim K, Song K, Song KB, Nurse P, Heo KL Nature Biotechnology. 2012 Jun;28(6): 617-23 More
S. pombe Systematic Screen of Schizosaccharomyces pombe Deletion Collection Uncovers Parallel Evolution of the Phosphate Signal Transduction Pathway in Yeasts Theresa C. Henry, Juliette E. Power, Christine L. Kerwin, Aishat Mohammed, Jonathan S. Weissman, Dale M. Cameron, and Dennis D. Wykoff Eukaryot Cell. 2011 February; 10(2): 198–206. More
S. pombe Cross-species chemogenomic profiling reveals evolutionarily conserved drug mode of action Laura Kapitzky, Pedro Beltrao, Theresa J Berens, Nadine Gassner, Chunshui Zhou, Arthur Wüster, Julie Wu, M Madan Babu, Stephen J Elledge, David Toczyski, R Scott Lokey, and Nevan J Krogan Mol Syst Biol. 2010; 6: 451. More
S. pombe Identification and characterization of the mitochondrial RNA polymerase and transcription factor in the fission yeast Schizosaccharomyces pombe Hengyi Jiang, Wenxia Sun, Zhe Wang, Jing Zhang, Dongrong Chen, and Alastair I. H. Murchie Nucleic Acids Res. 2011 July; 39(12): 5119–5130. More
S. pombe Ubiquitin-proteasome genes as targets for modulation of cisplatin sensitivity in fission yeast Laura Gatti, Kwang L Hoe, Jacqueline Hayles, Sabina C Righetti, Nives Carenini, Laura Dal Bo, Dong U Kim, Han O Park, and Paola Perego BMC Genomics. 2011; 12: 44. More
S. pombe The Essential Functions of NEDD8 Are Mediated via Distinct Surface Regions, and Not by Polyneddylation in Schizosaccharomyces pombe David Girdwood, Dimitris P. Xirodimas, and Colin Gordon PLoS One. 2011; 6(5): e20089. More
S. pombe Reorganization of the Growth Pattern of Schizosaccharomyces pombe in Invasive Filament Formation James Dodgson, William Brown, Carlos A. Rosa, and John Armstrong Eukaryot Cell. 2010 November; 9(11): 1788–1797. More
S. pombe The telomeric transcriptome of Schizosaccharomyces pombe Amadou Bah, Harry Wischnewski, Vadim Shchepachev, and Claus M. Azzalin Nucleic Acids Res. 2012 April; 40(7): 2995–3005. More
S. pombe Break-induced ATR and Ddb1–Cul4Cdt2 ubiquitin ligase-dependent nucleotide synthesis promotes homologous recombination repair in fission yeast Jennifer Moss, Helen Tinline-Purvis, Carol A. Walker, Lisa K. Folkes, Michael R. Stratford, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Stephen E. Kearsey, Oliver Fleck, Christian Holmberg, Olaf Nielsen, and Timothy C. Humphrey Genes Dev. 2010 December 1; 24(23): 2705–2716. More
S. pombe Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex Emerson V. Stewart, Christine C. Nwosu, Zongtian Tong, Assen Roguev, Timothy D. Cummins, Dong-Uk Kim, Jacqueline Hayles, Han-Oh Park, Kwang-Lae Hoe, David W. Powell, Nevan J. Krogan, and Peter J. Espenshade Mol Cell. 2011 April 22; 42(2): 160–171. More
S. pombe Identification of Genes Affecting the Toxicity of Anti-Cancer Drug Bortezomib by Genome-Wide Screening in S. pombe Kojiro Takeda, Ayaka Mori, and Mitsuhiro Yanagida PLoS One. 2011; 6(7): e22021. More
S. pombe A piggyBac transposon-based mutagenesis system for the fission yeast Schizosaccharomyces pombe Jun Li, Jia-Min Zhang, Xin Li, Fang Suo, Mei-Jun Zhang, Wenru Hou, Jinghua Han, and Li-Lin Du Nucleic Acids Res. 2011 March; 39(6): e40. More
S. pombe The SET Domain Protein, Set3p, Promotes the Reliable Execution of Cytokinesis in Schizosaccharomyces pombe Stefan Rentas, Reza Saberianfar, Charnpal Grewal, Rachelle Kanippayoor, Mithilesh Mishra, Dannel McCollum, and Jim Karagiannis PLoS One. 2012; 7(2): e31224. More
S. pombe Nsk1 ensures accurate chromosome segregation by promoting association of kinetochores to spindle poles during anaphase B Graham J. Buttrick, John C. Meadows, Theresa C. Lancaster, Vincent Vanoosthuyse, Lindsey A. Shepperd, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Kevin G. Hardwick, and Jonathan B. A. Millar Mol Biol Cell. 2011 December 1; 22(23): 4486–4502. More
S. pombe A homeodomain transcription factor regulates the DNA replication checkpoint in yeast Frances S Purtill, Simon K Whitehall, Emma S Williams, Christopher J McInerny, Andrew D Sharrocks, and Brian A Morgan Cell Cycle. 2011 February 15; 10(4): 664–670. More
S. pombe Glucosidase II and N-glycan mannose content regulate the half-lives of monoglucosylated species in vivo Ivan D. Stigliano, Solana G. Alculumbre, Carlos A. Labriola, Armando J. Parodi, and Cecilia D'Alessio Mol Biol Cell. 2011 June 1; 22(11): 1810–1823. More
S. pombe Global Gene Expression Analysis of Fission Yeast Mutants Impaired in Ser-2 Phosphorylation of the RNA Pol II Carboxy Terminal Domain Reza Saberianfar, Stephen Cunningham-Dunlop, and Jim Karagiannis PLoS One. 2011; 6(9): e24694. More
S. pombe Genome-Wide Screening for Genes Associated with FK506 Sensitivity in Fission Yeast Yan Ma, Weijuan Jiang, Qingbin Liu, Sayomi Ryuko, and Takayoshi Kuno PLoS One. 2011; 6(8): e23422. More
S. pombe Conservation and Rewiring of Functional Modules Revealed by an Epistasis Map in Fission Yeast Assen Roguev, Sourav Bandyopadhyay, Martin Zofall, Ke Zhang, Tamas Fischer, Sean R. Collins, Hongjing Qu, Michael Shales, Han-Oh Park, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim, Trey Ideker, Shiv I. Grewal, Jonathan S. Weissman, and Nevan J. Krogan Science. 2008 October 17; 322(5900): 405–410 More
S. pombe Chromatin-Associated Proteins Revealed by SILAC-Proteomic Analysis Exhibit a High Likelihood of Requirement for Growth Fitness under DNA Damage Stress Han Wang, Pornpimol Tipthara, Lei Zhu, Suk Yean Poon, Kai Tang, and Jianhua Liu Int J Proteomics. 2012; 2012: 630409. More
S. pombe Cross-Species Functionome Analysis Identifies Proteins Associated with DNA Repair, Translation and Aerobic Respiration as Conserved Modulators of UV-Toxicity John P. Rooney, Ashish Patil, Fraulin Joseph, Lauren Endres, Ulrike Begley, Maria R. Zappala, Richard P. Cunningham, and Thomas J. Begley IGenomics. 2011 March; 97(3): 133–147. More
S. pombe Translational Control of Cell Division by Elongator Fanelie Bauer, Akihisa Matsuyama, Julie Candiracci, Marc Dieu, Judith Scheliga, Dieter A. Wolf, Minoru Yoshida, and Damien Hermand Cell Rep. 2012 May 10; 1(5): 424–433. More
S. pombe The CCR4-NOT Complex Is Implicated in the Viability of Aneuploid Yeasts Yoshie Tange, Atsushi Kurabayashi, Bunshiro Goto, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Jacqueline Hayles, Yuji Chikashige, Chihiro Tsutumi, Yasushi Hiraoka, Fumiaki Yamao, Paul Nurse, and Osami Niwa PLoS Genet. 2012 June; 8(6): e1002776. More
S. pombe DNA repair factor APLF is a histone chaperone Pawan Vinod Mehrotra, Dragana Ahel, Daniel P. Ryan, Ria Weston, Nicola Wiechens, Rolf Kraehenbuehl, Tom Owen-Hughes, and Ivan Ah Mol Cell. 2011 January 7; 41(1): 46–55. More
S. pombe Studies on the Roles of Clathrin-Mediated Membrane Trafficking and Zinc Transporter Cis4 in the Transport of GPI-Anchored Proteins in Fission Yeast Wurentuya Jaiseng, Yue Fang, Yan Ma, Reiko Sugiura, and Takayoshi Kuno PLoS One. 2012; 7(7): e41946. More
S. pombe Critical Functions of Rpa3/Ssb3 in S-Phase DNA Damage Responses in Fission Yeast Santiago Cavero, Oliver Limbo, and Paul Russell PLoS Genet. 2010 September; 6(9): e1001138. More
S. pombe Response of Schizosaccharomyces pombe to Zinc Deficiency Samantha J. Dainty, Ciara A. Kennedy, Stephen Watt, Jürg Bähler, and Simon K. Whitehall Eukaryot Cell. 2008 March; 7(3): 454–464. More
S. pombe Functional Characterization of Pneumocystis carinii brl1 by Transspecies Complementation Analysis Libera Lo Presti, Moira Cockell, Lorenzo Cerutti, Viesturs Simanis, and Philippe M. Hauser Eukaryot Cell. 2007 December; 6(12): 2448–2452. More
S. pombe An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe Hyun-Soo Kim, Vincent Vanoosthuyse, Jeffrey Fillingham, Assen Roguev, Stephen Watt, Thomas Kislinger, Alex Treyer, Laura Rocco Carpenter, Christopher S. Bennett, Andrew Emili, Jack F. Greenblatt,3,9 Kevin G. Hardwick,2 Nevan J. Krogan,4,5 Jürg Bähler,6 and Michael-Christopher Keogh Nat Struct Mol Biol. 2009 December; 16(12): 1286–1293. More
S. pombe The Cell Surface Protein Gene ecm33+ Is a Target of the Two Transcription Factors Atf1 and Mbx1 and Negatively Regulates Pmk1 MAPK Cell Integrity Signaling in Fission Yeast Hirofumi Takada, Aiko Nishida, Mitsuhiro Domae, Ayako Kita, Yuki Yamano, Atsushi Uchida, Shunji Ishiwata, Yue Fang, Xin Zhou, Takashi Masuko, Mitsuhiro Kinoshita, Kazuaki Kakehi, and Reiko Sugiura Mol Biol Cell. 2010 February 15; 21(4): 674–685. More
S. pombe Dissection of the essential steps for condensin accumulation at kinetochores and rDNAs during fission yeast mitosis Norihiko Nakazawa, Takahiro Nakamura, Aya Kokubu, Masahiro Ebe, Koji Nagao, and Mitsuhiro Yanagida J Cell Biol. 2008 March 24; 180(6): 1115–1131. More
S. pombe Improved tools for efficient mapping of fission yeast genes: identification of microtubule nucleation modifier mod22-1 as an allele of chromatin- remodelling factor gene swr1 Andreas Anders, Stephen Watt, Jürg Bähler, and Kenneth E Sawin Yeast. 2008 December; 25(12): 913–925. More
S. pombe Elimination of a specific histone H3K14 acetyltransferase complex bypasses the RNAi pathway to regulate pericentric heterochromatin functions Bharat D. Reddy, Yu Wang, Lifang Niu, Emily C. Higuchi, Samuel B. Marguerat, Jürg Bähler, Gerald R. Smith, and Songtao Jia Genes Dev. 2011 February 1; 25(3): 214–219. More
S. pombe High-throughput knockout screen in fission yeast Juraj Gregan, Peter K Rabitsch, Cornelia Rumpf, Maria Novatchkova, Alexander Schleiffer, and Kim Nasmyth Nat Protoc. 2006; 1(5): 2457–2464. More
S. pombe The next frontier of systems biology: higher-order and interspecies interactions Michael A Fischbach, Nevan J Krogan Genome Biol. 2010; 11(5): 208. More
S. pombe Specific functions for the fission yeast Sirtuins Hst2 and Hst4 in gene regulation and retrotransposon silencing Mickaël Durand-Dubief, Indranil Sinha, Fredrik Fagerström-Billai, Carolina Bonilla, Anthony Wright, Michael Grunstein, and Karl Ekwall EMBO J. 2007 May 16; 26(10): 2477–2488. More
S. pombe The JmjC domain protein Epe1 prevents unregulated assembly and disassembly of heterochromatin Sarah C Trewick, Elsa Minc, Richard Antonelli, Takeshi Urano, and Robin C Allshire EMBO J. 2007 November 14; 26(22): 4670–4682. More
S. pombe Genomewide identification of pheromone-targeted transcription in fission yeast Yongtao Xue-Franzén, Søren Kjærulff, Christian Holmberg, Anthony Wright, and Olaf Nielsen BMC Genomics. 2006; 7: 303. More
S. pombe Quantitative cell array screening to identify regulators of gene expression Pinay Kainth and Brenda Andrews Brief Funct Genomics. 2010 January; 9(1): 13–23. More
S. pombe The Natural Anticancer Agent Plumbagin Induces Potent Cytotoxicity in MCF-7 Human Breast Cancer Cells by Inhibiting a PI-5 Kinase for ROS Generation Ju-Hee Lee, Ji-Hyun Yeon, Hanna Kim, Whijae Roh, Jeiwook Chae, Han-Oh Park, and Dong-Myung Kim PLoS One. 2012; 7(9): e45023. More
S. cerevisiae
VN-Fusion Library
in vivo quantification of protein-protein interactions in Saccharomyces cerevisiae using bimolecular fluorescence complementation assay Min-Kyung Sung, Won-Ki Huh J Microbiol Methods. 2010. 83(2), 194-201. More
S. cerevisiae
VN-Fusion Library
Bimolecular fluorescence complementation analysis system for in vivo detection of protein-protein interaction in Saccharomyces cerevisiae Min-Kyung Sung, Won-Ki Huh Yeast. 2007. 24(9), 767-775. More
S. cerevisiae
VN-Fusion Library
Construction, verification and experimental use of two epitope-tagged collections of budding yeast strains Russell Howson, Won-Ki Huh, Sina Ghaemmaghami, James V. Falvo, Kiowa Bower, Archana Belle, Noah Dephoure, Dennis D. Wykoff, Jonathan S. Weissman and Erin K. O’Shea Comp Funct Genom. 2005. 6, 2–16. More
S. cerevisiae
VN-Fusion Library
Global analysis of protein localization in budding yeast Won-Ki Huh, James V. Falvo, Luke C. Gerke, Adam S. Carroll, Russell W. Howson, Jonathan S. Weissman and Erin K. O’Shea Nature. 2003. 425, 686-691. More
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Drug Target & Toxicity Identification Service


Bioneer’s unique Drug Target & Toxicity Identification Services

Features & Benefits of GPScreen™ Services

  • World's unique & innovative technology
  • Identify any classes of drug targets in genome through genome-wide screening
  • Live cell-based screening
  • High throughput screening
  • Rapid; average 20 days for genome-wide screening
  • Accurate, precise & cost-effective
  • Drug target validation services available in human cells (optional !)
  • Applicable to drug repositioning, natural drug target discovery, toxicity profiling

 

Ⅰ. Introduction

Precise Drug Target Identification is a first step for improving efficacy, tracing and avoiding side-effects as well as understanding the mode-of-actions of drug candidates. However, until now, effective systematic approaches for the precise drug target identification at genome levels have not been commercially available. Using S. pombe genome-wide heterozygous deletion mutant library, Bioneer has developed a high-throughput genome-wide drug target screening service system (GPScreen™) and made it commercially available for your drug discovery needs. GPScreen™ screening service covers a broad spectrum of drug candidates in whole disease areas from cancers & metabolic diseases to neglected & rare diseases and, therefore, will provide the total solutions for an efficient drug discovery through providing clear-cut answers to problems such as drug-target(s) and toxicity as well as mode-of-actions of drug candidates.


 

“Bioneer’s GPScreen™ using S. pombe genome-wide heterozygous deletion mutant library has enabled genome-wide screening for drug target identification”

GPScreen™ is based on Bioneer’s unique S. pombe genome-wide deletion mutant library, which was developed by Bioneer and the Korea Research Institute of Bioscience & Biotechnology (KRIBB) in collaboration with Dr. Paul Nurse of Cancer Research Center UK (Nat. Biotech, 28, 617–623 (2010)). It can be used for genetic and chemical screening such as drug target identification, gene expression profiling and synthetic lethal profiling.

This mutant library comprised of a total of 4,840 heterozygous diploid deletion mutants representing 98.5% genome coverage and one copy of a specific gene in each mutant was deleted by homologous recombination. GPScreen™ exclusively offers S. pombe deletion mutant library as a powerful tool for large-scale genetic functional analysis, identification and verification research of drug targets and for integrated systems research of cell function.


Ⅱ. Principle of GPScreen

"Drug-induced Haploinsufficiency (DIH)" is a situation in which a strain with a heterozygous gene deletion (producing target proteins to about half of normal levels), result in cells sensitive to a specific drug. DIH occurs when a drug or drug candidate acts on a mutant strain in which the level of target gene protein is lowered from normal to half level, and is considered to be a valuable tool for drug target identification. Previously, a number of reports have provided identifications of drug targets using DIH in budding yeast S. cerevisiae (Baetz K et al., 2004; Lum et al., 2004). However, fission yeast S. pombe is considered a better model of mammalian cells since its cell cycle regulation is closer to that of mammalian cells than that of S. cerevisiae


“GPScreen™ utilizes DIH in the fission yeast S. pombe genome-wide heterozygous deletion mutant library to identify the drug target(s).

References

• Baetz K et al. Yeast genome-wide drug-induced haploinsufficiency screen to determine drug mode of action. PNAS. 2004
[More information]

• Lum PY et al. Discovering modes of action for therapeutic compounds using a genome-wide screen of yeast heterozygotes.
Cell. 2004
[More information]



Ⅲ. Performance of GPScreen

GPScreen™ is a best-in class genome-wide drug target identification system that is exclusively offered by Bioneer Inc. It allows for the clear-cut identification of molecular targets of drugs/ drug candidates (A representative is below).

Figure 1. Drug Target Identification using GPScreen™.
In the presence of cytochalasin A (Fig. 1A), a heterozygous deletion mutant of act1 shows decreased growth as a result of a decrease in “functional” Act1 protein. act1 was the only gene in the genome-wide screen to show this effect, demonstrating that act1 is a target of cytochalasin A (Fig. 1B).


Ⅳ. Applications of GPScreen

Toxicity profiling and Drug Prioritization
Drug Repositioning and Enhancement
Natural Drug Target Discovery
Chemogenomic profiling

Toxicity profiling using GPScreen™ at early stage of drug development would accommodate 'Drug Prioritization' among drug candidates very efficiently, thereby reducing time and money dramatically in the later stage of drug discovery.


V. Flow chart of GPScreen™ Service

 

 






 

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ORTHentication Services exclusively from Bioneer

ORTHentication Services (Ortholog-Authentication services) provide an siRNA-based gene susceptibility test for human orthologs identified through GPScreen™. This allows for validation of the drug targets in human cells. This is done via a method that is similar to Haploinsufficiency screens in yeast (See our GPScreen™): the cells are exposed to the drug and a GI50 is determined for wild type cells. Then they are exposed to the same level of drug after siRNA treatment and subsequent knockdown of the target gene. If the gene in question is being targeted by the drug candidate, then the knockdown of the gene would have a further deleterious effect on cell growth – clearly validating the Human ortholog as a drug target.


Target validation services include

  • Discovering human orthologs of drug target genes identified through GPScreen™ via rigorous bioinformatics analysis
  • Design and synthesis of siRNAs targeting the human orthologs using our exclusive genome-wide human siRNA library (AccuTarget Genome-wide Predesigned siRNA library)
  • Validation of the drug target in human cells by co-treatment of siRNA targeting the corresponding human ortholog (direct mimicking of haploinsufficiency of S. pombe system) followed by the drug treatment
  • Cell biology analysis including proliferation assays in the presence of siRNA and drug; analysis of phenotypic outcome and mode-of-action of the drug

ORTHentication Services are especially well suited for rapid drug repositioning and allow you to fast-track to clinical trial using drug candidates whose toxicity and efficacy tests have been previously completed.


in vivo Validation of ORTHentic (Ortholog-Authentic) genes

Once positively identified, the Human Orthologs can be further validated in an in vivo mouse model. To achieve this, the mouse homolog of the human gene is pulled from our genome-wide mouse siRNA library. This gene is then synthesized into our novel SAMiRNA (Self-Assembled Micelle siRNA) prodrug using a proprietary synthesis method. SAMiRNA is a novel prodrug that is stable in vivo for several days and can be targeted to cell types through targeting molecules on its surface. SAMiRNA also naturally targets Tumors and cancerous tissue through enhanced permeability and retention effects. It has been demonstrated to have no detectable toxicity at therapeutic levels and is the best vehicle for in vivo siRNA delivery available.

 

SAMiRNA (Self-Assembled-Micelle-interfering-RNA)

One of the major hurdles for the development of RNA interference (RNAi)-based therapeutics is siRNA delivery. SAMiRNA (Self-Assembled-Micelle-interfering-RNA) is a novel class of RNAi molecule developed by Bioneer. The therapeutic potential of SAMiRNA is highlighted by virtue of its negligible toxicity and superb in vivo serum stability as well as its target gene silencing efficacy. These data indicate SAMiRNA’s exceptional therapeutic potential as an RNAi platform for a variety of diseases. Development of SAMiRNA system combines Bioneer’s extensive nucleic acid chemistry and pre-clinical research with our nucleic acid manufacturing and development expertise, which has been providing top-quality DNA oligos and siRNAs worldwide for close to 20 years.


Delivery challenges overcome by SAMiRNA technology

Challenges in siRNA delivery SAMiRNA NP system
Rapid clearance and degradation in serum Improved serum stability
Toxicity of delivery systems No detectable liver toxicity or innate immune response
Tissue specificity Tumor/tissue targeting capabilities
Silencing potency Long lasting in vivo silencing efficiency



 

SAMiRNA Custom Services

Bioneer’s SAMiRNA Custom Services provide a wide range of RNAi research services to companies and research institutions worldwide. We offer a complete solution for RNAi (gene silencing) studies and drug discovery. The company’s research and technical support teams ensure the top-quality products and services to meet the unique needs of clients. Our world-class teams have extensive nucleic acid therapeutic manufacturing and development expertise.


 

Our SAMiRNA Custom Services include:

Custom siRNA design/synthesis (also offering genome-wide pre-designed mouse and human siRNA library)

in vitro screen/validation of siRNAs of choice

SAMiRNA nanoparticle synthesis

in vivo siRNA delivery and biodistribution/efficacy test using murine models

Quantitation of functional knockdown of target gene by real time qRT-PCR

And much more


 

Features and Benefits

Novel, self-assembling siRNA nanoparticles form with a protective PEG coat and optimal nano-scale size for selective localization in either vascularized tumors through EPR effects, or to targeted tissues through the addition of targeting moieties to the surface of the SAMiRNA.

Features Benefits
The world's first siRNA prodrug technology Stable molecule that is processed in target cell to its active form
Strong intellectual property position around SAMiRNA's unique structure and manufacturing processes You're protected working with Bioneer!
in vivo efficacy validated in animal disease models via low dose I.V.injection Proven delivery technology
Superb serum stability (PK/PD validated) Knockdown efficiency lasts for days in vivo
Extremely low toxicity and cytokine induction No detectable toxicity at thera putic levels!
Fully automated solid phase chemical synthesis of siRNA conjugates; advantage of manufacturing & QC processes for large scale production of siRNA drug Long half-life and extreme stability in vivo
Powerful siRNA delivery platform technology: Flexibility to in corporate siRNA sequences against any disease target Your target-our sequence!
The most cost effective way to prioritize promising gene targets for drug discovery and validate candidate RNAi therapeutics in vivo Use our SAMiRNA services today to save time and money

Novel patent-pending Self-Assembling, siRNA nanoparticles (Figure 1) form with a protective PEG coat and optimal nano-scale size for selective localization in either vascularized tumors through an Enhanced Permeability and Retention (EPR) effects, or to targeted tissues through the addition of targeting moieties to the surface of the SAMiRNA.

  • siRNA Prodrug: highly stable in circulation and siRNA is released and active only when metabolized within the target cells
  • Combined with various targeting moiety, SAMiRNA nanoparticles can target various target organs of interest, for example, liver.
  • Suitable for studying in vivo function of tumor related genes in clinically relevant manner (Figure 2 and 3)
  • The most cost effective way to prioritize promising gene targets for drug discovery and validate candidate RNAi therapeutics in vivo
  • No detectable toxicity or cytokine induction, minimizing off-target effects

 

A new class of single molecule-based self-assembling Nanoparticles


Figure 1. Structure of SAMiRNA Nanoparticle.
(A) Schematic diagram of SAMiRNA (B) Cryo-TEM images of SAM-siRNA Nanoparticles (scale bar = 100 nm).


 

Long-lasting in vivo efficacy validated in mouse cancer models

Figure 2. in vivo silencing of target mRNA by SAMiRNA Nanoparticels (NPs).
(A) Tumor bearing mice were intravenously injected with saline (PBS), SAMiRNA, and tumor-targeting folic acid (FA)-conjugated SAMiRNA Nanoparticles at a single 5mg/kg dose. Mice were sacrificed at denoted time points and targeted survivin mRNA levels in isolated tumor cell mass were subsequently measured by Real-Time PCR. (B) Tumor bearing mice were intravenously injected with saline (PBS) and SAMiRNA NP at a single 1 or 5mg/kg dose. Mice were sacrificed at 72 hr postinjection and targeted survivin mRNA levels in isolated tumor cell mass were subsequently measured using Real-Time qPCR.


 

Tumor-specific targeting of SAMiRNA NPs in mouse cancer models
Figure 3. in vivo targeting of SAMiRNA Nanoparticels (NPs) to s.c. grafted tumor.
(A) Time-dependent in vivo tumor targeting specificity of Cy5.5-labeled SAMiRNA NPs, delivered via i.v. to tumor-bearing nude mice. (B) Images of various organs extracted from treated mice post-mortem. No fluorescence was detectable outside of the tumor proper.



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An Innovative Technology for Drug Target Identification using Drug-induced Haploinsufficiency (DIH) in the World’s Unique Fission Yeast S. pombe Genome-wide Heterozygous Deletion Mutant Library


Outline of GPScreen™ Service Process

This service was designed to meet your specific needs fast (results in only 2-3 weeks) at extremely attractive prices. GPScreen™ services is provided with not only genome-wide screening (using 4840 full mutant strains) or as essential gene screening (using 1259 essential gene mutant strains). Furthermore, we can also provide other screening services on specified functional gene groups which are involved in various signaling pathways and/or disease areas (e.g. Cell cycle regulation/cancers) in accordance with your specific needs: By screening only a specified functional subset of the library you can use this service at a reduced price as described below.



 

 







 

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Ⅰ. How to place a GPScreen™ Service order

To place an order, please follow these steps:
• Download the ordering form. [Download] Note that you will need to fill out one Worksheet/drug compound being tested.
• Complete the order form with your information, product, drug and other relevant info.
• E-mail the completed order form to contact@bioneer.com.au
• Bioneer will confirm order and send service information (service price & period) via e-mail.
• The service can be started the same day the compounds are received.

 

Ⅱ. How to send us your compounds

* Delivery address:
S. pombe Research Team, Bioneer Corporation
8-11, Munpyeongseoro, Daedeok-gu, Daejeon 306-220, Republic of Korea


(When shipping your compounds, please write your name and organization on your box.)



Ⅲ. Contact Us

For order inquiries and status, please email us at contact@bioneer.  com  .au

 

Ⅳ. GPScreen™ Service

GPScreen™ Service provides various screening services to meet the specific needs of customers. Therefore, you can make the best choice among the various services below. After considering the issues and problems of your drug candidates, choose any service you need.

1) Primary Test Service for Determination of Growth-inhibitory Activity (GI50) in Wild Type S. pombe

Primary Test Service will be performed to all compounds requested in advance of GPScreen

Cat.No. Primary Test Service Cell Type Price
GPS-00 Primary Test Service in Wild Type S. pombe SP286 $500.0 /
Compound

* Price of primary test will be dramatically discounted when the number of compounds is ≥ 2.

 

2) GPScreen™ Service using S. pombe Genome-wide Mutant Set

Cat.No. Primary Test Service Cell Type Price
GPS-00 Primary Test Service in Wild Type S. pombe SP286 $500.0 /
Compound

 

3) GPScreen™ Service using S. pombe Essential gene Mutant Set

Cat.No. Essential Gene Screening Service No. of Genes Price
GPS-02-ESS S. pombe Essential Gene Heterozygous Deletion Mutant Screening Service 1259 Inquire

 

4) GPScreen™ Service using KOG analysis-based Functional Group Subsets

Cat.No. Functional Group-based Subset Services No. of Genes Price
INFORMATION STORAGE AND PROCESSING
GPS-03K-A A: RNA processing and modification Screening Service 210 Inquire
GPS-03K-B B: Chromatin structure and dynamics Screening Service 97 Inquire
GPS-03K-J J: Translation, ribosomal structure and biosis Screening Service 378 Inquire
GPS-03K-K K: Transcription Screening Service 239 Inquire
GPS-03K-L L: Replication, recombination and repair Screening Service 180 Inquire
CELLULAR PROCESSES AND SIGNALING
GPS-03K-D D: Cell cycle control, cell division, chromosome partitioning Screening Service 183 Inquire
GPS-03K-M M: Cell wall/membrane/envelope biosis Screening Service 48 Inquire
GPS-03K-N N: Cell motility Service 2 Inquire
GPS-03K-O O: Posttranslational modification, protein turnover, chaperones Screening Service 396 Inquire
GPS-03K-T T: Signal transduction mechanisms Screening Service 285 Inquire
GPS-03K-U U: Intracellular trafficking, secretion, and vesicular transport Screening Service 292 Inquire
GPS-03K-V V: Defense mechanisms Screening Service 21 Inquire
GPS-03K-W W: Extracellular structures Screening Service 5 Inquire
GPS-03K-Y Y: Nuclear structure Screening Service 31 Inquire
GPS-03K-Z Z: Cytoskeleton Screening Service 109 Inquire
METABOLISM
GPS-03K-E E: Amino acid transport and metabolism Screening Service 187 Inquire
GPS-03K-F F: Nucleotide transport and metabolism Screening Service 66 Inquire
GPS-03K-G G: Carbohydrate transport and metabolism Screening Service 142 Inquire
GPS-03K-H H: Coenzyme transport and metabolism Screening Service 79 Inquire
GPS-03K-I I: Lipid transport and metabolism Screening Service 118 Inquire
GPS-03K-C C: Energy production and conversion Screening Service 163 Inquire
GPS-03K-P P: Inorganic ion transport and metabolism Screening Service 82 Inquire
GPS-03K-Q Q: Secondary metabolites biosynthesis, transport and catabolism Screening Service 48 Inquire
POORLY CHARACTERIZED
GPS-03K-R R: General function prediction only Screening Service 551 Inquire
GPS-03K-S S: Function unknown Screening Service 284 Inquire


5) GPScreen™ Service using Human Disease-related Subsets

Cat.No. Human Disease-related Subset Services No. of Genes Price
GPS-04H-A Cell Cycle Regulator Screening Service 321 Inquire
GPS-04H-B DNA Damage Repair Screening Service 376 Inquire
GPS-04H-C Cytokinesis Screening Service 124 Inquire
GPS-04H-D Chromatin Remodeling Screening Service 257 Inquire
GPS-04H-E Histone Modification Screening Service 63 Inquire
GPS-04H-F Protein Kinase Screening Service 223 Inquire
GPS-04H-G GTPase Proteins Screening Service 90 Inquire
GPS-04H-H ABC Transporter Screening Service 31 Inquire
GPS-04H-I Transcription Factor Screening Service 362 Inquire
GPS-04H-J Neurological Disease Screening Service 19 Inquire

Ⅴ. SAMiRNA in vivo Drug Target Screening

Bioneer’s SAMiRNA Services will provide a rapid e-mail quotation (contact@bioneer.com.au),
comprehensive service packages, and highly competitive prices.
Please let us know the details of your project, so that we can provide you with an accurate quotation and timeline estimate.

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Instruments


ExiProgen™ from Bioneer

The first instrument for Automatic Protein biosynthesis, DNA/RNA purification

                                             ExiProgen™ is unique instrument for automated protein biosynthesis in vitro.
It features the ability to express 16 different proteins simultaneously only using recombinant plasmid. Also it is able to purify His- tagged proteins automatically without any additional column work. As well as His-tagged proteins, DNA/RNA from various biological samples such as whole blood, tissue, mammalian cells, bacteria, and plants can be purified and extracted with high quality.
ExiProgen™ has advanced features such as an intuitive touch screen, UV sterilization, and Contamination Shield, each designed to provide an extra level of confidence in your results.
ExiProgen™ is essential instrument for 21C Biotechnological laboratory
Patent application KR 10-2011-0085824

Exicycler™ 96 from Bioneer

Superior 5-color Real-Time Quantitative PCR system

                                                                                       Exicycler™ 96 is a superior 96-well PCR system designed for real-time qPCR applications demanding the highest performance. Proprietary Light Tunnel (LT) Technology mitigates the common problem of uneven light distribution across the 96-well plate, allowing for normalization of fluorescence signals from all five channels without the use of a reference dye. The instrument is also equipped with a thermal gradient function, allowing for convenient PCR condition optimization experiments. The analysis software contains several different modules for analyzing qPCR data including: Absolute Quantification, Relative Quantification, SNP genotyping, Existence/Nonexistence and melting curve analysis. With the various modules analyses such as viral load monitoring, gene expression analysis, SNP genotyping etc. can be performed. In vitro diagnostic software packages have also been developed (KFDA, CE-IVD certified versions), which allows the instrument to be used for molecular diagnostic purposes.
Patent registration LT (Light Tunnel) Technology, KR 10-794703, (Pending patent,US 10/551784)





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Privacy Policy


Contact Us


Ordering/Shipping


Bioneer Pacific - Product Ordering

Bioneer Pacific offers multiple modes for ordering including online/electronic ordering for Oligos and for all other products through direct contact with our Customer Service team at 1300 414 053 and via fax 03 8359 8800.

Fax orders are not accepted for oligos in the interests of avoiding transcription errors.

This website contains detailed product descriptions for the product range and catalogue numbers as listed against each product under the ‘ordering information’ tab should be used where possible when placing orders with our Customer Service team.

Online ordering for oligos (tube) can be completed where the user has Registered to this site and uses either credit card or has pre-arranged Account-holder status with Bioneer Pacific. The step-by-step process permits the user to select the Scale, Method of Purification and Modifications if required as well as direct input of the sequence.

The site will calculate the price for each Oligo and a final value for the entire order including shipping & handling and Goods & Services Tax (GST). Institutional and Individual Accounts holders are provided with the opportunity to enter an official Purchase Order number prior to completion and processing of an order to ensure compliance with such requirements.

 

Alternatively, both tube and plate oligos can be ordered using the downloadable Excel templates from the ‘Order Oligos’ page  and e-mailed to oligos@bioneer.com.au   In such instances, Bioneer Pacific will confirm your Oligo pricing to you via a Proforma Invoice and will follow through via telephone to confirm your order and payment details. 

 

For other service related products including siRNA, s.Pombe library, Gene Synthesis and Sequencing etc, please enquire by contacting us directly at 1300 414 053 or by e-mail contact@bioneer.com.au

 

 

Packaging, Handling & Shipping Information
 

Bioneer Pacific charges a standard Packaging, Handling & Delivery charge of $27.00 + GST for all routine orders.
In the case of Oligo orders in excess of $300 + GST this fee may be waived.
For orders of specialised product requiring import and domestic shipment on Dry Ice, a Dry Ice surcharge may apply. Dry Ice is considered a Hazardous Good by transport companies and significant surcharges generally apply.

More information relating to Shipping & Delivery can be found in the section of this website ‘Terms & Conditions’.
 

 


 

 

Bioneer Pacific - Product Ordering/Shipping

Bioneer Pacific offers multiple modes for ordering including online/electronic ordering for Oligos and for all other products through direct contact with our Customer Service team at 1300 414 053 and via fax 03 8359 8800.

Fax orders are not accepted for oligos in the interests of avoiding transcription errors.

This website contains detailed product descriptions for the product range and catalogue numbers as listed against each product under the ‘ordering information’ tab should be used where possible when placing orders with our Customer Service team.

Online ordering for oligos (tube) can be completed where the user has Registered to this site and uses either credit card or has pre-arranged Account-holder status with Bioneer Pacific. The step-by-step process permits the user to select the Scale, Method of Purification and Modifications if required as well as direct input of the sequence.

The site will calculate the price for each Oligo and a final value for the entire order including shipping & handling and Goods & Services Tax (GST). Institutional and Individual Accounts holders are provided with the opportunity to enter an official Purchase Order number prior to completion and processing of an order to ensure compliance with such requirements.

 

Alternatively, both tube and plate oligos can be ordered using the downloadable Excel templates from the ‘Order Oligos’ page  and e-mailed to oligos@bioneer.com.au   In such instances, Bioneer Pacific will confirm your Oligo pricing to you via a Proforma Invoice and will follow through via telephone to confirm your order and payment details. 

 

For other service related products including siRNA, s.Pombe library, Gene Synthesis and Sequencing etc, please enquire by contacting us directly at 1300 414 053 or by e-mail contact@bioneer.com.au

 

 

Packaging, Handling & Shipping Information

Bioneer Pacific charges a standard Packaging, Handling & Delivery charge of $27.00 + GST for all routine orders.
In the case of Oligo orders in excess of $300 + GST this fee may be waived.
For orders of specialised product requiring import and domestic shipment on Dry Ice, a Dry Ice surcharge may apply. Dry Ice is considered a Hazardous Good by transport companies and significant surcharges generally apply.

More information relating to Shipping & Delivery can be found in the section of this website ‘Terms & Conditions’

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About Us


Bioneer Pacific was established in 2012 as the Australian arm of Bioneer Corporation (Korea), a KOSDAQ listed company with direct operations in Korea (South), the USA and China.

Bioneer was founded in 1992 and was the first bioventure company to emanate from the Korea Research Institute for Biotechnology & Bioscience (KRIBB). The company has developed a global presence and has extended its product line from high quality Oligonucleotides, RNAi and Gene synthesis services to innovative reagent and instrument systems for Molecular Research and In-Vitro Diagnostics.

Bioneer Pacific’s office and warehouse facilities are located in Melbourne.

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News & Events


News & Events

Nov 2013: Victor Chang Cardiac Research Institute acquires ExiProgenTM                        
Bioneer Pacific is pleased to announce that the Victor Chang Cardiac Research Institute (VCCRI) in Sydney has elected to acquire the ExiProgen™ Protein Synthesis and Purification system as a system platform critical for the acceleration of its protein research.
 
The following news release can be found at the Victor Chang Cardiac Research Institute website.
http://www.victorchang.edu.au/home/news-events/news/news-detail/?news_name=new-method-rapid-production-protein
 




                                                  NEW METHOD FOR RAPID PRODUCTION OF PROTEINS 

 

A new instrument, the ExiProgenTM from Bioneer, is allowing scientists at the Victor Chang Cardiac Research Institute to rapidly compare normal proteins, the powerhouse of the body’s cells, with those found in diseases.
The ExiProgenTM enables scientists to manufacture and purify a protein within a cell-free in-vitro system, rather than using the traditional method, which involves expressing it from live cells.
Dr Romaric Bouveret said: “This instrument is the first of its kind in Australia. By using it to look at the structure of normal proteins, we hope we can then work backwards to better understand the effect of mutant proteins, responsible for different cardiovascular conditions including congenital heart disease.
“It allows us to look quickly at lots of different conditions which might affect the production and stability of proteins, including temperature.
“The machine has also been designed to enable the rapid purification of total DNA and RNA from cells, which means we can obtain high yields of ultra pure material very quickly.  Although we haven’t explored these capabilities yet; we are very excited about doing so, and benefitting much more from the machine in the future.”
The Victor Chang Cardiac Research Institute was able to purchase the ExiProgenTM thanks to the generosity of Mrs Mimi Wong.
 
The Victor Chang Cardiac Research Institute is an independent, not-for-profit research facility, dedicated to the memory of cardiac surgeon Dr Victor Chang and his passionate belief in the power of discovery. Founded in 1994, the Institute has grown to become a world-class cardiac research and research training facility.
The ExiProgen™ system has been developed by Bioneer Corporation, a KOSDAQ listed company based in Daejeon, South Korea.


 

Feb 2013: Bernice Tan joins Bioneer Pacific
Bernice Tan has joined Bioneer Pacific as a Sales & Applications Specialist. Bernice studied at the University of New South Wales and comes to us having recently completed her PhD at the Garvan Institute of Medical Research. She has considerable depth and experience in many aspects of molecular biology, including protocol optimisation and troubleshooting which is sure to add substantial value for our customers when considering and selecting products from the Bioneer Pacific product range for their research. Welcome Bernice.




Feb 2013: Bioneer Pacific at the Lorne Genome Conference

Bioneer Pacific will be participating at the 34th Annual Lorne Genome Conference at the Mantra Lorne Resort Feb 17th – 19th.
We will be showcasing the ExiProgen™ ‘cell-free’ protein synthesis and purification system in addition to our comprehensive range of Amplification kits and Enzymes.
Please drop by to see us at booth #4 to meet us and to pick up your 10% discount Coupon Code in celebration of the launch of our new Australian website. The Coupon Code can be used right across the product range and includes online ordering of Oligos.

 

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Order Oligos


AccuPower® Taq PCR Premix


The nation's first Global Standard PCR - all reagents are lyophilized for PCR.
 

The AccuPower® Taq PCR PreMix is a convenient lyophilized PCR master mix containing Taq DNA polymerase, dNTPs, reaction buffer, tracking dye, and patented stabilizer and is aliquoted in 8-strip PCR tubes. The premix retains its activity for over a month at room temperature and is stable for two years in -20°C freezer. AccuPower® Taq PCR PreMix is available with or without tracking dye, depending on your application. If purchased with tracking dye, reactions can be loaded on agarose gels without adding loading buffer.

 Features and Benefits

  • Flexible: Taq provides accurate amplification of standard and highly suitable for all PCR applications.
  •  Easy to use: All reaction components required for PCR, including thermostable DNA polymerase and dNTPs are contained within each tube and in a lyophilized "PreMix" form. 
  •  Reproducibility: Bioneer's strict quality controlled production system ensures that your results will be reproducible experiment after experiment.
  •  Convenient: Just add template and primers and start your reaction. dNTPs, buffer and enzyme are provided
  •  Stability: Stable at room temperature for a month and for 2 years in a -20°C freezer
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Specifications

Source: thermus aquatics
5' -> 3' exonuclease activity: Yes
3' -> 5' exonuclease activity: No
3' – A Overhang: Yes


Application

- Routine PCR
- Primer extension
- TA cloning
- Gene sequencing


Experimental data


Figure 1. Comparison of PCR amplification efficiency between AccuPower® Taq PCR PreMix from Bioneer and other suppliers' PCR master mix.

The cycling conditions for AccuPower® Taq PCR PreMix were 95°C for 5 min, 35 cycles of 95°C for 20 sec, 55°C for 20 sec, and 72°C for 30 sec. PCR reactions using other suppliers' PCR master mix were performed according to each supplier's protocol.
Target Gene : human myc.
Lane M : 100 bp DNA Ladder (Bioneer, Cat. No. D-1030)
Lane 1 : 10 ng of human total cDNA
Lane 2 : 1 ng of human total cDNA
Lane 3 : 100 pg of human total cDNA
Lane 4 : 10 pg of human total cDNA
 

 
Figure 2. Comparison of PCR amplification efficiency between AccuPower® Taq PCR PreMix from Bioneer and other suppliers' PCR master mix.

The cycling conditions for AccuPower® Taq PCR PreMix were 95°C for 5 min, 35 cycles of 95°C for 20 sec, 55°C for 20 sec, and 72°C for 30 sec. PCR reactions using other suppliers' PCR master mix were performed according to each supplier's protocol.
Target Gene: IRGC (Immunity-related GTPase family, cinema)
Lane M : 100 bp DNA Ladder (Bioneer, Cat. No. D-1030)
Lane 1 : 10 ng human genomic DNA
Lane 2 : 1 ng human genomic DNA
Lane 3 : 100 pg human genomic DNA
Lane 4 : 10 pg human genomic DNA
 


Figure 3. Comparison of PCR amplification of long targets between AccuPower® Taq PCR PreMix from Bioneer and other suppliers' PCR master mix.

The cycling conditions for AccuPower® Taq PCR PreMix were 95°C for 5 min, 30 cycles of 95°C for 20 sec, 65°C for 20 sec, and 68°C for 8 min. PCR reactions using other suppliers' PCR master mix were performed according to each supplier's protocol.
Lane M : 1 kb DNA Ladder (Bioneer, Cat. No. D-1040)
Lane 1 : 3 kb fragment (human tumor protein p53 gene)
Lane 2 : 4 kb fragment (human beta globin region)
Lane 3 : 4.5 kb fragment (human DNA cross-link repair 1A gene)
Lane 4 : 8 kb fragment (human hemoglobin epsilon 1 gene)



 

 

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Manual
AccuPower® Taq PCR PreMix

AccuPower® Taq PCR MasterMix


MSDS
AccuPower® Taq PCR PreMix


Brochure
• AccuPower® PreMix series - 2010 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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AccuPower® PCR PreMix (with UDG)


AccuPower® PCR PreMix(with UDG) is a ready-to-use master mix for high-specificity DNA amplification, con-taining UDG to prevent carryover contamination or crossover contamination

The polymerase chain reaction (PCR) can amplify a single molecule over a billionfold. Thus, even minuscule amounts of a contaminant can be amplified and lead to a false positive result. Such contaminants are often products from previous PCR amplifications (carry-over contamination). Therefore, researchers have developed methods to avoid such contamination AccuPower® PCR PreMix(with UDG) is a ready-to-use master mix containing all components, except primers, for the amplification and detection of DNA in PCR The master mix combines Top DNA polymerase with integrated UDG carryover prevention technology to provide optimal performance with a variety of PCR detection technologies

Features and Benefits

Prevention of carryover contamination
UDG and dUTP in the MasterMix prevent the reamplification of carryover PCR products between reactions. dUTP ensures that any amplified DNA will contain uracil, while UDG removes uracil residues from single- or double-stranded DNA, preventing dU-containing DNA from serving as template in future PCRs, A UDG incubation step(37°C,2min) before PCR cycling destroys any contaminating dU-containing product from previous reactions. UDG is then inactivated by the high temperatures during normal PCR cycling, thereby allowing the amplification of genuine target sequences




Easy-to-use
All reaction components required for PCR, including thermostable DNA polymerase and dNTPs are contained within each tube and in a lyophilized "PreMix" form. The user needs only to add template DNA, primers and water. Materials necessary for loading agarose gels for electrophoresis are also added in the reaction, negating the need to add loading dye after PCR is completed

Reproducibility
Each batch is produced under strict quality controls. Errors that commonly occur during mass production are eliminated during the individual packaging process. Bioneer’s current batch processing system allows for the production of more accurate and reproducible end-product yield

 

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Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: Yes
Fragment Size: ~ 10 kb

 

Application

Polymerase chin reaction (PCR)
Primer extension
TA cloning
Gene sequencing
Molecular Diagnosis

 

Experimental data

Sensitivity


Figure 1. Comparison of sensitivity between Accupower® PCR PreMix and Accupower® PCR PreMix(with UDG).
Sensitivity test was operated using serial diluted human genomic DNA. Reaction mixture was incubated at 37°C for 2min followed by 95°C for 5min, 30 cycles of 20sec at 95°C, 20sec at 55°C, 30sec at 72°C. Accupower® PCR PreMix(with UDG) contains dUTP besides dATP, dGTP, dCTP and dTTP. The amount of DNA used to test is represented below.
Lane 1: 10ng of Human genomic DNA Lane 2: 1ng of Human genomic DNA
Lane 3: 100pg of Human genomic DNA Lane 4: 10pg of Human genomic DNA
M: 100 bp DNA ladder (Bioneer Cat. No: D-1030-1)



Figure 2. Comparison of amplification quality using PCR products(not including uracil base) between Accupower® PCR PreMix and Accupower® PCR PreMix(with UDG).
Amplification quality test was operated using serial diluted PCR products not including uracil base. Accupower® PCR PreMix was also tested for negative control. Reaction mixture was incubated at 37°C for 2min, followed by 95°C for 5min, 30 cycles of 20sec at 95°C, 20sec at 55°C, 30sec at 72°C. Accupower® PCR PreMix(with UDG) contains dUTP besides dATP, dGTP, dCTP and dTTP. The copy number of PCR products(copy) used to test is represented below.
Lane 1: 1011copy Lane 2: 1010copy Lane 3: 109copy
Lane 4: 108copy Lane 5: 107copy Lane 6: 106copy
Lane 7: 105copy Lane 8: 104copy Lane 9: 103copy
Lane 10: 102copy Lane N: No template control
M: 100 bp DNA ladder (Bioneer Cat. No: D-1030-1)


 Prevention of carryover contamination

Figure 3. Efficiency of uracil DNA glycosylase using PCR products(including uracil base).
Efficiency test of uracil DNA glycosylase was operated using serial diluted PCR products including uracil base. Accupower® PCR PreMix was also tested for negative control.
Reaction mixture was incubated at 37°C for 2min, followed by 95°C for 5min, 30 cycles of 20sec at 95°C, 20sec at 55°C, 30sec at 72°C. Accupower® PCR PreMix(with UDG) contains dUTP besides dATP, dGTP, dCTP and dTTP.
The copy number of PCR products used to test is represented below.
Lane 1: 1011copy Lane 2: 1010copy Lane 3: 109copy
Lane 4: 108copy Lane 5: 107copy Lane 6: 106copy
Lane 7: 105copy Lane 8: 104copy Lane 9: 103copy
Lane 10: 102copy Lane N : No template control M: 100 bp DNA ladder (Bioneer Cat. No: D-1030-1)



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Manual
AccuPower® PCR PreMix(with UDG)


MSDS
MSDS_AccuPower® PCR PreMix(with UDG)


Brochure
• AccuPower® PreMix series - 2010 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate

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Hotstart PCR


AccuPower® HotStart PCR PreMix


Hot Start PCR master mix, unique Hot Start method for DNA amplification

AccuPower® HotStart PCR PreMix is a PCR master mix containing a thermostable DNA polymerase, thermostable pyrophosphatase, reaction buffer, dNTPs, tracking dye, and patented stabilizer in a ready to use hotstart PCR master mix.

Bioneer uses a unique enzyme-mediated HotStart PCR that provides robust and reliable results. Bioneer’s Top DNA Polymerase is inhibited at lower temperatures (< 70°C) by pyrophosphate. However, Top DNA Polymerase is rendered fully active at temperatures above 70°C via pyrophosphate hydrolysis with our thermostable pyrophosphatase. This prevents the formation of mis-primed products and primer-dimers during the reaction set up process resulting in improved PCR specificity. It is ideal for nucleic acid amplification reactions involving complex genomic or cDNA templates, very low copy targets, and multiplex reactions.

 

Features and Benefits

  • Ease of use: Just add template and primers and start your PCR, dNTPs, buffer and enzyme are provided
  • Stability: Stable at room temperature for a month and for 2 years in a -20°C freezer

       
 

  •  HotStart: Unique enzyme mediated HotStart results in greater specificity and more robust reactions
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Specifications

5' to 3' exonuclease activity: No
3' to 5' exonuclease activity: No
Terminal transferase activity: Yes
Fragment Size: Up to 12 kb


Application

HotStart PCR up to 12 kb
PCR with complex genomic templates/low copy
Templates cDNA
Multiplex PCR reactions



Figure 1. Specificity comparison between AccuPower® PCR PreMix and AccuPower® HotStart PCR PreMix. 50 ng human genomic DNA was amplified into 2.5 - 3 kb fragments with the two products.

A: AccuPower PCR PreMix
B: AccuPower HotStart PCR PreMix
Lane M: 1 kb DNA Ladder (D-1040)
Lane 1: 2.5 kb product
Lane 2: 3.0 kb product



Figure 2. Specificity comparison of multiplex PCR with various HotStart PCR reagents. Each PCR mixture with 2 ng of human genomic DNA and 2 pairs of primers (p53 + p55 and p55 + p63) was incubated for 2 hours at 37°C prior to performing multiplex PCR.


 

M: 100 bp DNA Ladder (D-1030)
A: AccuPower® HotStart PCR PreMix
B: Control – AccuPower® PCR PreMix
C: Company T's antibody mediated HotStart Taq DNA polymerase (0.5 U)
D: Company A’s antibody mediated HotStart Taq DNA polymerase (1.0 U)

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Manual
AccuPower® Hotstart PCR PreMix


MSDS
AccuPower® Hotstart PCR PreMix


Brochure
• AccuPower® PreMix series - 2010 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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Reverse Transcriptase


M-MLV Reverse Transcriptase


For cDNA Synthesis, RT-PCR, and qRT-PCR

Moloney Murine Leukemia Virus (M-MLV) Reverse Transcriptase is an RNA-dependent DNA polymerase. This enzyme is able to use an RNA molecule as a template and synthesize a double-stranded DNA. M-MLV Reverse Transcriptase is isolated from an E.coli strain containing a recombinant clone. It is ideal for use of first-strand synthesis cDNA from RNA molecules and for cDNA synthesis for Reverse Transcriptase PCR and qRT-PCR

Features and Benefits

  • Optimized 5X buffer: For more full length fragments - within 10 minutes
  • Full length cDNA: For genes up to 9 kb
  • RNase, DNase and Proteinase-free: Ensures the integrity of your samples
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Enzyme Properties

5' to 3' exonuclease activity: No
3' to 5' exonuclease activity: No
3’ – A Overhang: No
Strand Displacement: Yes Fragment Size: Up to 9 kb

 

Application

First strand cDNA synthesis from RNA, RT-PCR, and qRT-PCR

 

Reagents Supplied

5 x Reaction Buffer: 50 mM Tris-HCl, 250 mM KCl, 10 mM MgCl2, pH 8.1
100 mM DTT
dNTP Mix: 2.5 mM of each dNTP

 

Concentration

200 U/μl

 

Storage Conditions

50% glycerol containing 20 mM Tris-Cl (pH7.6), 150 mM NaCl, 0.1 mM EDTA, 1 mM DTT, 0.1 % IGEPAL CA-630

 

Store Temperature

-20°C

 

Unit Definition

One unit is defined as the amount of enzyme required to incorporates 1 nmole of dTTP into acid-precipitable material in 10 minutes at 37°C using poly (A)oligo (dT) as template primer.

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Manual

M-MLV Reverse Transcriptase


MSDS

M-MLV Rtase

M-MLV Rtase dilution buffer

M-MLV reaction buffer

100mM DTT


Brochure

Enzymes 2010 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

 

 

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Privacy Policy


Privacy Policy What information do we collect?
Bioneer Pacific will only collect information that is used to conduct relevant business functions or activities.
We collect information from you when you create an account on our site or complete a form or template.
When placing an order or creating an account on our site you may be asked to provide your name, business name, email address, business address and phone number in addition to any other information required by us to process your order.
Statistical information relating to visitors to our site, the nature of purchases, products viewed, location etc is collected from time-to-time in the interests of improving our website and your online experience.
Our Web site uses cookies in secured areas to enable us to deliver an efficient service. Information is retained on your PC via cookies for that session only to alleviate the need for repeated entry of user identification details. You have an option to change the settings on your browser if you do not wish to accept cookies, however if you do, some of our features may not work as they were intended to.
Personal information that is not required for business or would be inappropriate is not collected however, we may from time-to-time request information relating to your professional/product related interests as they might relate to specialised marketing and customer loyalty programs.
You have the opportunity to request removal from the contact database at any time or to refuse marketing material and other communications by e-mailing us at contact@bioneer.com.au

What do we use your information for?
The information we collect from you may be used in the following ways:
To process your order – your information will be used for the express purpose of delivering the purchased product or service to you.
To send periodic emails – The email address you provide may be used to send you updates pertaining to your order, company newsletters and product updates/specials. If at any time you would like to unsubscribe from receiving future emails please e-mail your request for removal to us at contact@bioneer.com.au
To improve customer service – your information helps us to more effectively respond to your customer service requests and support needs.
To personalise your experience – your information helps us to better respond to your individual needs.
To improve our website – We continually strive to improve our website offerings based on the information and feedback we receive.
We do not sell, trade or otherwise transfer your personal information to outside parties.

Account Security
If you elect to create an account on this website you agree to provide us with true, accurate and complete information about yourself and to maintain accurate information. There is no cost to create an account on this website.

If you create an account on this website, you are entirely responsible for maintaining the confidentiality of your password and other user account information. You agree to notify us in the event of any known or suspected unauthorised use of your account or any known or suspected breach of security including loss, theft or unauthorised disclosure of yours or anyone else’s password. You are entirely responsible for any and all activities that occur under your user account.
User names and passwords may be linked to an Institutional Account. In such cases where a user on an Institutional Account ceases to be an employee or becomes unauthorised to operate on the account, it is the responsibility of the authorised officer from that particular account to notify Bioneer Pacific in writing of the need to remove any such users from association with the account. Notification should be to contact@bioneer.com.au
The Bioneer Pacific website provides the availability to pay using Credit Card. We take active steps to secure your information and we do not retain credit card details on file or in any website related database so as to prevent any unauthorised access.
Only people who are authorised to manage or view your details are involved in processing your orders for payment and they are trained in fraud prevention and management following guidelines of the Commonwealth Bank of Australia.
When using the web site, we use Secure Sockets Layer (SSL) software to encrypt data transmissions. Bioneer Pacific does not control SSL and cannot guarantee the strength or effectiveness of that encryption.
We operate secure data networks, protected by industry standard firewall and password protection.
Bioneer Pacific does not retain credit card data on file and credit card transactions require separate input for each transaction made.

Questions or Complaints
If you have any questions or complaints regarding the privacy or security of information you should contact the Privacy Officer, Bioneer Pacific on 1300 414 053 in the first instance.


 

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Terms & Conditions


Terms & Conditions The Bioneer Pacific website is intended for use by customers and potential customers of the Company located within the States & Territories of Australia (only).
Users of the site are encouraged to register with a User Name and Password and this provides each user with access to the site including pricing where applicable, product information and special offers. 
Please carefully read the following terms and conditions relating to your use of the site.
All reasonable effort has been made to provide accurate information; however we do not warrant or make representations as to its accuracy and Bioneer Pacific and its related companies accepts no responsibility or liability for any losses or damages resulting from use of information published on the website.
By using our website, you agree to the Terms & Conditions of Use. We reserve the right at our sole discretion, to change, modify, add or remove portions of these terms and conditions at any time.
As such, it’s strongly recommended that these terms and conditions are checked periodically for changes.
By using this website following the posting of any changes to these terms and conditions, you agree to accept those changes.

Products
We have made every effort to describe as accurately as possible the features and specifications of our products however; you are encouraged to contact us using 1300 414 053 or by e-mailing contact@bioneer.com.au if you are unsure and require any further clarification regarding configuration, application or use.
Custom service products that are shipped directly from the production facility to the end-user include Oligonucleotides, siRNA, miRNA, S.pombe library, gene synthesis, sequencing etc. Inventory shipped from the Melbourne warehouse includes Amplification products, Enzymes, Protein synthesis and purification products etc.
Goods purchased from Bioneer Pacific may only be used for their intended purpose as outlined in the relevant package insert, instructions for use or as detailed on the website. Any alternative use is undertaken at the customer's own risk and Bioneer Pacific and its related companies shall not be liable for replacement of product or any consequential loss or damage.

Shipping & Delivery
Custom service products are shipped directly from the Bioneer production facility in Daejeon, South Korea to the customer/end user using either Fedex or DHL on Bioneer Pacific’s account.
Importation is made by way of Bioneer Pacific’s import permits (where applicable) and all freight and import related costs are paid directly by Bioneer Pacific. The customer /end-user should never be called upon to make payments related to importation unless specifically organised with Bioneer Pacific.
Time and preparation for Custom Services products may vary depending upon the complexity of the service requested. i.e. simple, tube Oligos without modification are generally synthesised within 24-hours of receipt of order and shipped to arrive at the customer site, typically within 4 days. More complex requests including Gene Synthesis may take typically between 1 and 2 weeks.
While Bioneer Pacific assumes responsibility for importation, delays due to flight scheduling, industrial disputes or import clearances etc are beyond the control of Bioneer Pacific. We do however undertake to be diligent in facilitating expedient resolution of any such delays.
Product (non-custom) that is generally held in inventory in Bioneer Pacific’s Melbourne warehouse and ordered prior to 12 noon on a normal working day is generally shipped overnight to customers using 3rd party freight companies such as StarTrack Express, Toll etc. or local courier companies in the case of local Melbourne deliveries. Orders received after 12-noon are shipped the following day or if received on a Friday are generally shipped the following Monday. Product not available ex-stock is ordered on the Bioneer production facility twice weekly and as such these products are generally supplied within 7-10 days.
Product is shipped according to the conditions as recommended and specified by the manufacturer. Please note that shipping and long-term storage requirements may differ in specification. As such, product may be shipped ‘ambient’ but labelled ‘store refrigerated’ or shipped on ice packs but labelled ‘store -20C’.

Packaging, Handling & Delivery Charges
Bioneer Pacific charges a standard Packaging, Handling & Delivery charge of $27.00 + GST for all routine orders.
In the case of Oligo orders in excess of $300 + GST this fee may be waived.
For orders of specialised product requiring import and domestic shipment on Dry Ice, a Dry Ice surcharge may apply. Dry Ice is considered a Hazardous Good by transport companies and significant surcharges generally apply.

Title to Goods
Title to goods transfers to the customer according to whether the goods are those generally held in inventory by Bioneer Pacific or whether the goods are produced using Custom Services i.e. Oligo Synthesis that are shipped directly from the production facility to the end-user.
In the case of Custom Services, title to the goods transfers to the customer immediately the service/production  commences and/or a credit card or proforma invoice is accepted.
For items held in inventory and shipped from Bioneer Pacific’s warehouse, title transfers to the customer immediately upon shipment from the warehouse.
In both instances described, where Bioneer Pacific arranges freight/transportation on behalf of the customer, it will indemnify the customer against any product spoilage or loss arising directly from the transportation arrangements made. This indemnity will cease when the product is accepted at the customer’s premises and the customer will notify Bioneer Pacific within 24 hours regarding any concern resulting from the transportation of the goods to its premises or delivery of incorrect product or product shortage.

Returns Policy
Product determined to be faulty or not meeting the product specification can only be returned using a valid Return Authorisation Number (RAN) issued by Bioneer Pacific. Bioneer Pacific will directly liaise with the customer/end-user regarding any such issues and the physical pick-up and return of the goods.

Pricing
All pricing is in Australian dollars (AUD) and prices for products, services, delivery and other charges displayed on this website are current at the time of placement on the website (errors and omissions excepted). We reserve the right to change prices at any time without notice.
From time to time, special offers and price discounts will be made available to our customers and users of this website using coupons. Offers and discounts are available until the end of the quoted period or while stocks last, whichever may first occur. We reserve the right to withdraw any offer or discount at any time without notice.
Bioneer Pacific’s standard packaging, handling & delivery charge is $27.00 which is waived for Oligo orders with a total value of $300+GST or above. This charge applies once to each specific order. Open ordered product is shipped at no-charge when it becomes available. Packaging, handling & delivery charges are reviewed periodically.
A Dry-Ice surcharge may be applied for product specifically requiring dry-ice/special handling and will be quoted directly to the customer/end-user in such instances as and when this might apply.
Australian Goods and Services Tax (GST) is applied to all orders invoiced and supplied however any or all taxes relating to importation remain the responsibility of Bioneer Pacific.

Payment
Payment for product ordered through this website can be made immediately using Credit Card according to the options provided in the online store or by Institutional Account credit terms as may be negotiated and approved from time-to-time (account holder terms & conditions apply).

Account Security
If you elect to create an account on this website you agree to provide us with true, accurate and complete information about yourself and to maintain accurate information. There is no cost to create an account on this website.

If you create an account on this website, you are entirely responsible for maintaining the confidentiality of your password and other user account information. You agree to notify us in the event of any known or suspected unauthorised use of your account or any known or suspected breach of security including loss, theft or unauthorised disclosure of yours or anyone else’s password. You are entirely responsible for any and all activities that occur under your user account.
User names and passwords may be linked to an Institutional Account. In such cases where a user on an Institutional Account ceases to be an employee or becomes unauthorised to operate on the account, it is the responsibility of the authorised officer from that particular account to notify Bioneer Pacific in writing of the need to remove any such users from association with the account. Notification should be to contact@bioneer.com.au
The Bioneer Pacific website provides the availability to pay using Credit Card. We take active steps to secure your information and we do not retain credit card details on file or in any website related database so as to prevent any unauthorised access.
Only people who are authorised to manage or view your details are involved in processing your orders for payment and they are trained in fraud prevention and management following guidelines of the Commonwealth Bank of Australia.
When using the web site, we use Secure Sockets Layer (SSL) software to encrypt data transmissions. Bioneer Pacific does not control SSL and cannot guarantee the strength or effectiveness of that encryption.
We operate secure data networks, protected by industry standard firewall and password protection.
Bioneer Pacific does not retain credit card data on file and credit card transactions require separate input for each transaction made.
 
Third Parties
These terms and conditions apply only to this website and not to the websites of any other person or entity. We may provide, or third parties may provide, links to other websites or resources. In using this site you acknowledge and agree that Bioneer Pacific is not responsible for the availability of such external site resources, and does not endorse (and is not responsible or liable for) any content, advertising, products or other materials, goods or services on or available from such websites or resources.

Copyright
Content within this website is protected by copyrights, patents, trademarks, trade secrets and/or other proprietary rights under applicable laws. You may not modify, publish, transmit, distribute, participate in the transfer of sale of, create derivative works of or in any way exploit or gain from the use of any of the content of this website in whole or in part. When content is downloaded to your computer, you do not obtain any ownership or interest in such content. Modification or use of the content in any form is strictly prohibited unless you receive our prior written consent from Bioneer Pacific. Our commercial partners and other third parties may have additional proprietary rights in the content which they make available on this website.

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Trademarks & Legal Notices


Trademarks & Legal Notices

Legal information regarding Copyrights and trademarks

Bioneer Copyright Statement

All content residing on the Internet location described by Bioneer.com.au and sister sites is copyright of Bioneer Corporation (Korea) unless specifically identified otherwise.  For permission to use any content hosted on this site, please contact the webmaster at contact@bioneer.com.au. All Rights Reserved.


Trademarks

Trademarks referenced herein are either registered trademarks or trademarks of Bioneer Corporation in the U.S. and/or other countries. The names of actual companies and products mentioned herein and/or third party trademarks, trade names and logos contained herein may be the trademarks of their respective owners. Any rights not expressly granted herein are reserved.

Bioneer Trademarks

 
Bioneer® PrepMate MyGenie
AccuZol SilverStar AccuPrep®
AccuPower® AccuRapid ExiProgen
AccuCut RocketPlex DualStar
RocketScript AccuLadder CycleScript
GreenStar HT-MegaGrow® Exicycler
Agaro-Power ExiGenotyper ExiStation
ExiPrep Biovac AccuOligo®
ExiSpin Extendamer™ AccuTarget
GPScreen SAMiRNA™ HT-Oligo™

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Long & high fidelity PCR


AccuPower® ProFi Taq PCR Premix


AccuPower® ProFi Taq PCR PreMix for high efficiency and amplification of long range PCR



AccuPower
® ProFi Taq PCR PreMix is a convenient lyophilized PCR master mix containing ProFi Taq DNA polymerase, reaction buffer, dNTPs, tracking dye, and a patented stabilizer. ProFi Taq DNA polymerase in the premix is a unique recombinant Taq DNA polymerase that offers enhanced amplification efficiency and higher fidelity for PCR. AccuPower® ProFi Taq PCR PreMix is applicable to any template DNA, and especially effective in amplifying large genomic DNA fragments around 20 kb. AccuPower® ProFi Taq PCR PreMix provides accurate long-range amplification of standard and amplification of low-copy target, and is highly suitable for all PCR applications.

Features and Benefits
 

  • Long PCR:  ProFi Taq is especially effective in amplifying large genomic DNA fragments around 20 kb and amplifying Lambda DNA up to 30kb.
  • Easy to use:  All reaction components required for PCR, including thermostable DNA polymerase and dNTPs are contained within each tube and in a lyophilized "PreMix" form. 
  • Reproducibility:  Bioneer's strict quality controlled production system ensures that your results will be reproducible experiment after experiment.
  • Convenient:  Just add template and primers and start your reaction. dNTPs, buffer and enzyme are provided
  • Stability:  Stable at room temperature for a month and for 2 years in a -20°C freezer

 

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Specifications

5' to 3' exonuclease: Yes
3' to 5' exonuclease: Yes
3' – A Overhang: Yes
PCR product size: ~ 30kb

 

Application

- Primer extension
- long-range amplification from genomic DNA
- High amplification efficiency
- Excellent performance on difficult templates
- Amplification of low-copy targets
- High yield and high sensitivity PCR

 

Experimental data


Figure 1. Comparison of PCR amplification efficiency between AccuPower® ProFi Taq PCR PreMix from Bioneer and other suppliers' PCR master mix

The cycling conditions for AccuPower® ProFi Taq PCR PreMix were 95°C for 5min, 30 cycles of 95°C for 20 sec, 55°C for 20 sec and 72°C for 30 sec. PCR reactions using other suppliers' PCR master mix were performed according to each supplier's protocol.
Target : human insulin receptor gene.
Lane M : 100 bp DNA Ladder(Bioneer, Cat. No. D-1030)
Lane 1 : 10 ng of human genomic DNA
Lane 2 : 1 ng of human genomic DNA
Lane 3 : 100 pg of human genomic DNA
Lane 4 : 10 pg of human genomic DNA


Figure 2. Comparison of PCR amplification efficiency between AccuPower® ProFi Taq PCR PreMix from Bioneer and other suppliers' PCR master mix

cDNA synthesized from 10-fold serial-diluted human total RNA from 10 ng to 10 pg using AccuPower® RocketScript™ Cycle RT PreMix. (Bioneer, Cat. No K-2201) wase used as a template for PCR amplification. The cycling conditions for AccuPower® ProFi Taq PCR PreMix were 95°C for 5min, 33 cycles of 95°C for 20 sec, 55°C for 20 sec and 72°C for 30 sec. PCR reactions using other suppliers' PCR master mix were performed according to each supplier's protocol.
Target : human GAPDH gene.
Lane M : 100 bp DNA Ladder(Bioneer, Cat. No. D-1030)
Lane 1 : 10 ng of human total cDNA
Lane 2 : 1 ng of human total cDNA
Lane 3 : 100 pg of human total cDNA
Lane 4 : 10 pg of human total cDNA



Figure 3. Comparison of PCR amplification of long targets between AccuPower® ProFi Taq PCR PreMix from Bioneer and other suppliers' PCR master mix

The cycling conditions for AccuPower® ProFi Taq PCR PreMix were 95°C for 5 min, 30 cycles of 95°C for 20 sec, 65°C for 20 sec and 68°C for 4 min. PCR reactions using other suppliers' PCR master mix were performed according to each supplier's protocol.
Lane M1 : Lambda/Hind III marker (Bioneer, Cat. No. D-1050)
Lane M2 : 1 kb DNA Ladder (Bioneer, Cat. No. D-1040)
Lane 1 : 2 kb fragment (human tumor protein p53 gene)
Lane 2 : 3 kb fragment (human tumor protein p53 gene)
Lane 3 : 4.5kb fragment (human DNA cross-link repair 1A gene)
Lane 4 : 8 kb fragment (human hemoglobin epsilon 1 gene)


Figure 4. Comparison of PCR amplification of long targets between AccuPower® ProFi Taq PCR PreMix from Bioneer and other suppliers' PCR master mix

The cycling conditions for AccuPower® ProFi Taq PCR PreMix were 95°C for 5 min, 32 cycles of 95°C for 20 sec and 68°C for 15 min. PCR reactions using other suppliers' PCR master mix were performed according to each supplier's protocol. Human genomic DNA was used as a template for PCR amplification.
Lane M1 : Lambda/Hind III marker (Bioneer, Cat. No. D-1050)
Lane M2 : 1 kb DNA Ladder (Bioneer, Cat. No. D-1040)
Lane 1 : 11 kb fragment
Lane 2 : 13.5 kb fragment
Lane 3 : 17.6 kb fragment
Lane 4 : 21.4 kb fragment


Figure 5. Comparison of PCR amplification of long targets between AccuPower® ProFi Taq PCR PreMix from Bioneer and other suppliers' PCR master mix

The cycling conditions for AccuPower® ProFi Taq PCR PreMix were 95°C for 5 min, 32 cycles of 95°C for 20 sec, 65°C for40 sec, and 68°C for 20 min. PCR reactions using other suppliers' PCR master mix were performed according to each supplier's protocol. Lambda DNA was used as a template for PCR amplification.
Lane M1 : Lambda/Hind III marker (Bioneer, Cat. No. D-1050)
Lane M2 : 1 kb DNA Ladder (Bioneer, Cat. No. D-1040)
Lane 1 : 15 kb fragment
Lane 2 : 20 kb fragment
Lane 3 : 25 kb fragment
Lane 4 : 30 kb fragment



 

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Manual
AccuPower® ProFi Taq PCR PreMix


MSDS
AccuPower® ProFi Taq PCR PreMix


Brochure
• AccuPower® PreMix series - 2010 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

Multiplex PCR


AccuPower® Gold Multiplex PCR PreMix


AccuPower® Gold Multiplex PCR PreMix — amplify up to 20 targets in a single tube

AccuPower® Gold Multiplex PCR PreMix can amplify up to 20 target genes in a single tube. AccuPower® Gold Multiplex PCR PreMix contains Bioneer’s unique enzyme-mediated HotStart technology with Pyrophosphatase (PPase) and Pyrophosphate (PPi) for efficient suppression of non-specific products and enhanced amplification specificity.
AccuPower® Gold Multiplex PCR PreMix can be used for a variety of applications including genotyping assays or molecular diagnostics, and can also be used for cDNA-based semi-quantitative assays.


 

Features and Benefits

  • Flexibility: Up to 20 different target genes from human genomic DNA can be amplified in a single tube
  • Specificity: Pyrophosphate (PPi) has high affinity for Mg2+. By adding PPi to the reaction mixture, the Mg2+ ions necessary for normal PCR are bound, preventing DNA polymerase activity. This PPi-Mg2+ binding prevents non-specific before PCR (zero-cycle) product formation. Upon thermal cycling, the pyrophosphatase (PPase) that is also added to the mixture is activated (>70°C) and hydrolyzes the PPi to 2 phosphate groups and facilitates the release of Mg2+, which is then available for DNA polymerase to use and resume normal activity.
  • Easy-to-use: All reaction components required for PCR, including thermostable DNA polymerase and dNTPs are contained within each tube and in a lyophilized “PreMix” form. The user needs only to add template DNA, primers and water to perform up to 20-plex PCR. Materials necessary for loading agarose gels for electrophoresis are also added in the reaction, negating the need to add loading dye after PCR is completed.
  • Reproducibility: Each batch is produced under strict quality controls. Errors that may occur during mass production are eliminated during the individual packaging process. Bioneer’s current batch processing system allows for the production of more accurate and reproducible end-product. Additionally, the streamlining of setup using a lyophilized premix enhances reproducibility by minimizing setup variables.
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Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: Yes
Fragment Size: Up to 1 kb


Application

Target Application
Human and Animal
STR analysis for determining genetic profiles in forensic cases
Molecular diagnostic analysis
Genotyping assay
Qualitative and semi-qualitative gene expression assay
Mutant screening
Transgenic organism analysis
Plant
STR analysis
Detection of pathogens/bacterial infection
Transgenic organism analysis
Qualitative and semi-qualitative gene expression assay


Result


Figure 1. High specificity of AccuPower® Gold Multiplex PCR PreMix
Each lane from left to right represensts the progressive number of primer sets (1 – 20) included in single AccuPower® Gold Multiplex PCR PreMix.


Figure 2. Single PCR and Multiplex PCR using AccuPower® Gold Multiplex PCR PreMix
Each lane from left to right indicates the single and multiplex PCR products using AccuPower® Gold Multiplex PCR PreMix.
a) 10-plex PCR, b) 20-plex PCR

Figure 3. Comparison of amplification quality between AccuPower® Gold Multiplex PCR PreMix and competitor Multiplex PCR kits.
6-plex (a), 10-plex (b), 20-plex (c) primers were added into AccuPower® Gold Multiplex PCR PreMix and competitor master mixtures. A series of human genomic DNA diluents were tested (Lane 1: 100 ng, Lane 2: 10 ng, Lane 3: 1 ng).
 



Figure 4. Comparison of amplification quality using Labchip® between AccuPower® Gold Multiplex PCR PreMix and competitor Multiplex PCR kits.
a) Virtual Gel Image. Gel image illustrates data reproducibility of the LabChip 90 system.
b) Overlay of expression levels using Bioneer’s AccuPower® Gold Multiplex PCR PreMix and competitor multiplex PCR kits. The electropherogram displays the data between 10 PCR product yields using a 10-plex primer set to illustrate amplification efficiency.
c) The graph shows the total concentration of PCR products between AccuPower® Gold Multiplex PCR PreMix and other supplier’s master mixtures.            


 


 







Figure 4. Comparison of amplification quality using Labchip® between AccuPower® Gold Multiplex PCR PreMix and competitor Multiplex PCR kits.
a) Virtual Gel Image. Gel image illustrates data reproducibility of the LabChip 90 system.
b) Overlay of expression levels using Bioneer’s AccuPower® Gold Multiplex PCR PreMix and competitor multiplex PCR kits. The electropherogram displays the data between 10 PCR product yields using a 10-plex primer set to illustrate amplification efficiency.
c) The graph shows the total concentration of PCR products between AccuPower® Gold Multiplex PCR PreMix and other supplier’s master mixtures.            
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Manual
AccuPower® Gold Multiplex PCR PreMix


MSDS
AccuPower® Gold Multiplex PCR PreMix


Brochure
• AccuPower® Gold Multiplex PCR PreMix - 2011 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

 

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AccuPower® Multiplex PCR PreMix


AccuPower® Multiplex PCR PreMix can simultaneously detect one or more products in a one tube



Features and Benefits

  • Fexibility: Up to 20 different target genes from human genomic DNA can be amplified in a single tube
  • Easy-to-use:  All reaction components required for PCR, including thermostable DNA polymerase and dNTPs are contained within each tube and in a lyophilized “PreMix” form. The user needs only to add template DNA, primers and water to perform up to 20-plex PCR. Materials necessary for agarose gel electrophoresis are also added in the reaction, negating the need to prepare the samples for electrophoresis after PCR is completed.
  • Reproducibility: Each batch is produced under strict quality controls. Errors that commonly occur during mass production are eliminated during the individual packaging process. Bioneer’s current batch processing system allows for the production of more accurate and reproducible end-product yield.

 


AccuPower® Multiplex PCR PreMix can simultaneously detect one or more products in a one tube.

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Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: Yes
Fragment Size: ~1 kb

 

Application
 

Product Name 5' to 3' exonuclease
Human and Animal STR analysis for determining genetic profiles in forensic cases
Molecular diagnostic analysis
Genotyping assay
Qualitative and semi-qualitative gene expression assay
Mutant screening
Transgenic organism analysis


Figure 1. Single PCR and Multiplex PCR using AccuPower® Multiplex PCR PreMix

Each lane from left to right indicates the single and Multiplex PCR product using AccuPower® Multiplex PCR PreMix.
a) 10plex Multiplex PCR, b) 20plex Multiplex PCR
M; 25/100 bp Mixed DNA Ladder (cat. No. D-1020)


Figure 2. Comparison of amplification quality between AccuPower® Multiplex PCR PreMix and other supplier’s Multiplex PCR kit.

6-plex primers were added into AccuPower® Multiplex PCR PreMix and other supplier’s Multiplex PCR kit. A series of Human genomic DNA diluents were tested. ( Lane 1. Human genomic DNA 100ng, Lane 2. Human genomic DNA 10ng, Lane 3. Human genomic DNA 1ng ). All data were obtained using Mygene 96 machine (Applied Bioneer co.)
Supplier Q : Q company Multiplex PCR kit, Supplier S : S company Multiplex PCR kit, Supplier I : I company Taq polymerase for Mutiplex PCR (0.5U, added 2mM MgCl2) Rxn. Condition : 95°C for 10min, followed by 35cycles of 30sec at 95°C, 30sec at 60°C, 60sec at 72°C M; 25/100 bp Mixed DNA Ladder (cat. No. D-1020)


Figure 3. Comparison of amplification quality between AccuPower® Multiplex PCR PreMix and other supplier’s Multiplex PCR kit.

10-plex primers were added into AccuPower® Multiplex PCR PreMix and other supplier’s Multiplex PCR kit. A series of Human genomic DNA diluents were tested. ( Lane 1. Human genomic DNA 100ng, Lane 2. Human genomic DNA 10ng, Lane 3. Human genomic DNA 1ng ). All data were obtained using Mygene 96 machine (Applied Bioneer co.)
Supplier Q : Q company Multiplex PCR kit, Supplier S : S company Multiplex PCR kit, Supplier I : I company Taq polymerase for Mutiplex PCR (0.5U, added 2mM MgCl2)Rxn. Condition : 95°C for 10min, followed by 35cycles of 30sec at 95°C, 30sec at 65°C, 60sec at 72°C M; 25/100 bp Mixed DNA Ladder (cat. No. D-1020)



Figure 4. Comparison of amplification quality using Lapchip® between AccuPower® Multiplex PCR PreMix and other supplier’s master mixture.

a) Virtual Gel Image. Gel image illustrates data reproducibility of the LabChip 90 system.
b) Overlay of expression level using Bioneer’s multiplex PCR PreMix and other company’s multiplex PCR kit. The electropherogram displays the data between 10 PCR products yield using 10-plex primer sets to illustrate the Amplification efficiency.
c) The graph shows the total concentration of PCR products between AccuPower® Multiplex PCR PreMix and other supplier’s master mixture.


Figure 5. Comparison of amplification quality between AccuPower® Multiplex PCR PreMix and other supplier’s Multiplex PCR kit.

20-plex primers were added into AccuPower® Multiplex PCR PreMix and other supplier’s Multiplex PCR kit. A series of Human genomic DNA diluents were tested. (100ng ~ 1ng). All data were obtained using Mygene 96 machine (Applied Bioneer co.)
Supplier Q : Q company Multiplex PCR kit, Supplier S : S company Multiplex PCR kit, Supplier I : I company Taq polymerase for Mutiplex PCR (0.5U, added 2mM MgCl2)
Rxn. Condition : 95°C for 10min, followed by 35cycles of 30sec at 95°C, 30sec at 57°C, 60sec at 72°C M; 25/100 bp Mixed DNA Ladder (cat. No. D-1020) Trademark: 'AccuPower®' is a registered trademark of Bioneer Corporation.


 

 

]]>
Manual
AccuPower® Multiplex PCR PreMix


MSDS
AccuPower® Multiplex PCR PreMix


Brochure
• Amplification New Product-2011 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

RNA Amplification


AccuPower® RocketScript™ RT-PCR PreMix


Full length cDNA synthesis and PCR followed by AccuPower® RocketScript™ RT-PCR PreMix

AccuPower® RocketScript™ RT-PCR PreMix contains Bioneer’s exclusive M-MLV based thermostable reverse transcriptase (RTase) and Top DNA polymerase, dNTPs and reaction buffer components all in a single, easy to use, one-step RT-PCR product. By using RocketScript™ RTase, full-length cDNA are efficiently synthesized from complex secondary structure RNA species. RocketScript™ also has outstanding extension properties, allowing for highly-sensitive and high-yielding cDNA synthesis of low copy targets. The convenient lyophilized PreMix also contains tracking dye (blue and yellow) and also a density-increasing agent, allowing the user to directly place the reaction mixture in an agarose gel and perform electrophoresis.
 

Features and Benefits

Thermostable Activity:
Original M-MLV RTase has maximum activity at relatively low temperatures (42 °C), causing several problems in reverse transcription of complex secondary structure RNA molecules. To remedy this issue, Bioneer has developed a RTase active at high temperatures (above 50°C). RocketScript™ has thermostable activity (42~70°C), allowing efficient cDNA synthesis from complex secondary structure RNA and give the user freedom to optimize the reverse transcription reaction based on temperature.

Ease-of-Use:
- The product contains our thermostable RTase RocketScript™ , RNase inhibitors and all other components necessary for
a successful RT reaction in a single tube. Just add RNA, primers and PCR-grade water to perform the RT reaction.
-Components necessary for agarose gel electrophoresis are also contained within the product including tracking dye and
a density-increasing reagent for added convenience.
-T vector cloning is possible without any additional reactions.

Reproducibility:
Each product batch is produced under strict quality control processes for accurate and reproducible end product manufacturing.


]]>
Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: Yes
Fragment Size: 6 kb

 

Application

- First-strand synthesis of cDNA from RNA molecules (RT)
- RT-PCR
- Library construction
- Gene-expression analysis

 

Experimental Data


Figure 1. Performance comparison between AccuPower® RocketScript™ RT-PCR PreMix and competitor RT-PCR kits

Complex secondary structure RNA species amplification by RocketScript™ is outstanding compared to the leading competitor’s reverse transcriptase. RT reactions were performed according to each manufacturer’s recommendations.
Lanes 1-4 are 10 ng, 1 ng, 0.1 ng and 0.01 ng of total RNA from HeLa cells, respectively


Figure 2. AccuPower® RocketScript™ RT-PCR PreMix shows enhanced performance compared to competitors

One-Step RT-PCR reactions were performed with 100ng total RNA from HeLa cells using regents and conditions specified in each manufacturer’s protocol
Lane 1: 2.5kb Lane 2: 3kb Lane 3: 4.5kb Lane 4: 5.2kb


 

 

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Manual
AccuPower® RocketScript™ RT-PCR PreMix


MSDS
AccuPower® RocketScript™ RT-PCR PreMix


Brochure
• AccuPower® RocketScript™ RT-PCR PreMix - 2011 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

AccuPower® RT PreMix


Ready-to-use PCR master mix for cDNA synthesis from total RNA


The AccuPower® RT PreMix is a master mix for cDNA synthesis that consists of an easy to resuspend, lyophilized mix of M-MLV Reverse Transcriptase, RNase inhibitor, dNTPs, reaction buffer, tracking dye, and patented stabilizer. The master mix kit is used for first strand cDNA synthesis from RNA. Downstream applications include cDNA amplification with reverse transcription PCR. All of the key components are premixed at optimal concentrations. Simply add template RNA, primers and water to start your reaction.

For cDNA amplification with Cyclic RT, please see our AccuPower® CycleScript RT PreMix.
 

Features and Benefits

  •  Convenient lyophilized RT: Easy to use, simply add your purified RNA
  •  High yield of cDNA: For genes up to 9 kb within 10 minutes
  •  Stable for 2 years at -20°C: Long life
  •  RNase, DNase and Proteinase-free: Ensures the integrity of your samples


 


]]>
Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: No
Fragment size: 9 kb

 

Application

cDNA synthesis



Figure 1. Reliability and reproducibility test with AccuPower® RT PreMix. Each template showcases amplified target genes.

Lane M: 100 bp DNA Ladder (D-1030)
Lane 1-4: Reliability test of each lot with AccuPower® RT PreMix


 

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Manual
AccuPower® RT PreMix


MSDS
AccuPower® PCR Master Mixes


Brochure
• AccuPower® PCR Master Mixes - 2010 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

AccuPower® RocketScript™ RT PreMix


RocketScript™ the ONLY M-MLV Reverse Transcriptase Thermostable up to 70°C

AccuPower® RocketScript™ RT PreMix contains BIoneer’s exclusive M-MLV based thermostable reverse transcriptase (RTase), RocketScript™. Native M-MLV RTase has maximum activity at relatively low temperatures (42°C), causing several problems in reverse transcription of RNA molecules with complex secondary structure.

RocketScript™ has thermostable activity (42°C~70°C), allowing efficient cDNA synthesis from virtually any RNA. The lyophilized PreMix contains all components necessary for a successful reverse transcription reaction, including RTase, RNase inhibitor and buffer components. Just add template RNA, primers and water, and the RT reaction is ready to go.



Schematic representation of the 5’UTR of a gene, with complex secondary structure, at three different temperatures. Note that RocketScript™ shows full activity at 70°C allowing it to synthesize the complete gene sequence where M-MLV and other Reverse Transcriptase's fail.
 

Features and Benefits

  • Thermostable Activity: RocketScript™ is able to perform reverse transcription reactions throughout a wide range of temperatures from 42°C to 70°C.
  • Enhanced Performance: RocketScript™ has enhanced performance to handle both high and low input RNA concentrations as well as short and long RT target sizes.
  • Easy-to-use: The product contains the enzyme itself, plus RNase inhibitors and all other components necessary for the best reverse transcription results in the tube.
  • Reproducibility: Bioneer's strict quality controlled production system ensures that your results will be reproducible experiment after experiment.
  • Convenient: Just add template and primers and start your reaction. dNTPs, buffer and enzyme are provided.
  • Stability: Stable at room temperature for a month one year at 4°C and for 2 years in a -20°C freezer
  • RNase, DNase and Proteinase-free: Ensures the integrity of your samples.
  • Broad range of working temperatures: For RNAs that are G:C rich or significant secondary structure
  • Stable for 2 years at -20°C: Long shelf life

]]>
Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: No
Fragment Size: Up to 10 kb

 

Application

- First-strand synthesis of cDNA from RNA molecules (RT)
- RT-PCR
- Random priming reaction
- Library construction
- Probe labeling
- mRNA 5end Mapping by Primer Extension Analysis
- Real time PCR

 

Experimental data

Figure 1. Sensitivity comparison between AccuPower® RocketScript™ RT PreMix and M-MLV RTase
Sensitivity results of AccuPower® RocketScript™ RT PreMix using GAPDH compared with conventional Reverse transcriptases.
Each 100 ng – 10 fg of total RNA used for RT and the same amount of RT products used for electrophoresis.
Lane 1: 10 fg Human total RNA from HeLa cell Lane 2: 100 fg Human total RNA from HeLa cell
Lane 3: 1 pg Human total RNA from HeLa cell Lane 4: 10 pg Human total RNA from HeLa cell
Lane 5: 100 pg Human total RNA from HeLa cell Lane 6: 1 ng Human total RNA from HeLa cell
Lane 7: 10 ng Human total RNA from HeLa cell Lane 8: 100 ng Human total RNA from HeLa cell


Figure 2. Comparison of amplification efficiency between AccuPower® RocketScript™ RT PreMix and competitors M-MLV RTase.  
  RocketScript™ is able to handle a wide range of sample concentrations and transcript lengths so your downstream applications are minimally effected by the reverse transcription step.
Lanes 1-3: 1,000 ng, 100 ng and 10 ng of total RNA from HeLa cells, respectively.




Figure 3. Sensitivity comparison between AccuPower® RocketScript™ RT PreMix and competitor RTases using Real Time PCR
Reverse transcription conditions: conventional 1 hr incubation at 60°C, deactivation at 95°C for 5 min All cDNAs were amplified with AccuPower® DualStar™ qPCR PreMix (K-6110) from Bioneer.

Concentration RocketScript™ RT PreMix Supplier Q Supplier I
10,000 23.91 25.63 24.43
1,000 27.33 28.92 28.03
100 30.62 32.42 30.88
10 33.63 35.43 33.95
Efficiency 104% 103% 108%
Linearity 0.99999 0.9996 0.9995

 

 


 

]]>
Manual
AccuPower® RocketScript RT PreMix


MSDS
AccuPower® RocketScript RT PreMix


Brochure
• AccuPower® RocketScript RT PreMix - 2011 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

AccuPower® RocketScript™ Cycle RT PreMix


Amplify your cDNAs and your success with unsurpassed thermostability and sensitivity

AccuPower® RocketScript™ Cycle RT PreMix contains Bioneer’s exclusive M-MLV based thermostable reverse transcriptase
(RTase), RocketScript™. Conditions are optimized for Bioneer’s Cyclic Temperature Reverse Transcription (CTRT; patent pending) in a PreMix form.

Native M-MLV RTase has maximum activity at relatively low temperatures (42°C), causing several problems in reverse
transcription of RNA molecules with complex secondary structure.
AccuPower® RocketScript™ Cycle RT PreMix has thermostable activity across a wide temperature range, (42°C – 70°C),
allowing efficient cDNA synthesis from virtually any RNA.
The lyophilized PreMix contains all components necessary for a successful CTRT reaction, including RTase, RNase inhibitor and buffer components. Just add template RNA, primers and water, and the RT reaction is ready to go.


Schematic representation of the 5’UTR of a gene, with complex secondary structure, at three different temperatures.
Note that RocketScript™ shows full activity at 70°C allowing it to synthesize the complete gene sequence where M-MLV and other Reverse Transcriptase's fail.
 

Features and Benefits 

  • Thermostable Activity: RocketScript™ is able to perform reverse transcription reactions throughout a wide range of temperatures from 42°C to 70°C.
  • Enhanced Performance: RocketScript™ has enhanced performance to handle both high and low input RNA concentrations as well as short and long RT target sizes.
  • Easy-to-use: The product contains the enzyme itself, plus RNase inhibitors and all other components necessary for the best reverse transcription results in the tube.
  • Reproducibility: Bioneer's strict quality controlled production system ensures that your results will be reproducible experiment after experiment.
  • Convenient: Just add template and primers and start your reaction. dNTPs, buffer and enzyme are provided.
  • Stability: Stable at room temperature for a month one year at 4°C and for 2 years in a -20°C freezer
  • RNase, DNase and Proteinase-free: Ensures the integrity of your samples.
  • Broad range of working temperatures: For RNAs that are G:C rich or significant secondary structure
  • Stable for 2 years at -20°C: Long shelf life
]]>
Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: No
Fragment Size: Up to 10 kb

 

Application

- First-strand synthesis of cDNA from RNA molecules (Reverse Transcription)
- RT-PCR
- Random priming reaction
- Library construction
- Probe labeling
- mRNA 5' end mapping by primer extension analysis
- Real time PCR

 

Experimental data

Figure 1. Comparison of amplification efficiency between AccuPower® RocketScript™ Cycle RT PreMix and competitors’ RTases
(a) Sensitivity test
Primer set: Human TFRC set
Lane M: 1 kb DNA Ladder
Lane1: 100 ng Human total RNA from HeLa cell
Lane 2: 10 ng Human total RNA from HeLa cell
Lane3: 1 ng Human total RNA from HeLa cell
Lane4: 100 pg Human total RNA from HeLa cell
RT reaction condition is performed according to each manufacturer’s recommendations

(b) Full-Length cDNA synthesis test
RT reactions were performed according to each manufacturer’s recommendation. All cDNAs were amplified with AccuPower® Hotstart PCR Premix (K-5050) from Bioneer
Note: Competitor products show inhibition at high input concentrations of total RNA
Lane 1: 1 ug Human total RNA from HeLa cell
Lane 2: 100 ng Human total RNA from HeLa cell
Lane 3: 10 ng Human total RNA from HeLa cell


Figure 2. Complex RNA amplification results of RocketScript™ Cycle RT PreMix
Each target gene was amplified after performing reverse transcription with AccuPower® RocketScript™ Cycle RT PreMix.
Reverse transcription conditions: Conventional 1 hr incubation at 42°C, 50°C, or 60°C, deactivation at 95°C for 5 min
A: M-MLV Reverse Transcriptase
B: AccuPower® RocketScript™ Cycle RT PreMix with Oligo (dT)20
Lane 1: 100 ng Human total RNA from HeLa cell
Lane 2: 10 ng Human total RNA from HeLa cell
 

Concentration (copies/rxn) FTRT (Ct) CTRT with 1 cycle (Ct) CTRT with 10 cycles (Ct)
10,000 19.46 18.77 18.51
1,000 24.11 24.04 22.93
100 29.78 28.35 28.19
10 32.87 33.00 31.05
Figure 3. Low copy species enrichment by cycle.
Comparing FTRT (Fixed Temperature Reverse Transcription) to 1 and 10 cycle(s) of CTRT reveal progressive improvement in detected cDNA yield as input copies decrease.

FTRT: 60 min incubation at 50°C followed by 5 min deactivation at 95°C
CTRT: Cycles of 37°C annealing 10 sec, 50°C cDNA synthesis 4 min, 55°C secondary structure melting and cDNA synthesis 30 sec
Primer set: Human GAPDH
Human Total RNA from HeLa cells
qPCR with AccuPower® GreenStar™ qPCR PreMix (K-6210)


Figure 4. Amplification comparison by cycle

FTRT (Fixed Temperature Reverse Transcription) conditions:

Step Temperature Time No. of Cycles
dT20
cDNA synthesis 50°C 60 min 1
Heat inactivation 95°C 5 min 1

CTRT (Cyclic Temperature Reverse Transcription) conditions:

Step Time Temperature No. of Cycles
dT20
Primer annealing 37°C 10~30 sec 1, 5, 10, or 15
cDNA synthesis 50°C 4 min
Melting secondary structure & cDNA synthesis 55°C 30 sec
Heat inactivation 95°C 5 min 1

Primer set: Human GAPDH and myc set
Lane M: 1 kb DNA Ladder
Lane1: 10 ng Human Total RNA from HeLa Cell
Lane 2: 1 ng Human Total RNA from HeLa Cell
Lane 3: 100 pg Human Total RNA from HeLa Cell
Lane 4: 10 pg Human Total RNA from HeLa Cell


Figure 5. Comparison of amplification results between Bioneer RocketScript™ Cycle RT PreMix and competitor RTases
All cDNAs were amplified with AccuPower® Hotstart PCR Premix (K-5050) from Bioneer
Primer set: human Myc498 bp set
Lane M: 1 kb DNA Ladder
Lane1: 10 ng Human total RNA from HeLa Cell
Lane 2: 1 ng Human total RNA from HeLa Cell
Lane 3: 100 pg Human total RNA from HeLa Cell
Lane 4: 10 pg Human total RNA from HeLa Cell



 

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Manual
AccuPower® RocketScript Cycle RT PreMix


MSDS
AccuPower® RocketScript Cycle RT PreMix


Brochure
• AccuPower® RocketScript Cycle RT PreMix - 2011 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

AccuPower® CycleScript RT PreMix


PCR master mix for high yield, homogeneous cDNA synthesis and amplification



AccuPower® CycleScript RT (available with: dT20, dN12, or dN6 primers) PreMix is an easy to resuspend lyophilized PCR Master Mix of CycleScript Reverse Transcriptase, a primer, and all of the other components for cDNA synthesis conveniently packaged in individual tubes. Simply add template RNA, and water. Then, the reverse transcription is performed by either a Cyclic RT reaction (patent pending) or conventional reverse transcription PCR. The use of Cyclic RT produces cDNA amplification and better results compared to conventional reverse transcription PCR – especially for rare transcripts. The resulting cDNA can be used in a variety of applications such as reverse transcription PCR (RT-PCR). The AccuPower® CycleScript RT (dT20, dN12, or dN6) PreMix series is stable for 3 years at - 20°C due to a patented stabilizer.

AccuPower® CycleScript RT was developed for both a conventional reverse transcription PCR at a fixed temperature at 42°C as well as Cyclic Reverse Transcription that is carried out like a PCR (please see the following comparison table). Bioneer’s Cyclic RT is an innovative technology to synthesize more homogeneous cDNA in less time compared to the conventional reverse transcription.
 

Conventional Reverse Transcription

Step 1: RNA denaturation at 65°C for 10 minutes
Step 2: cDNA synthesis at a temperature between 37°C ~ 55°C for 15 ~ 60 minutes


Cyclic Reverse Transcription

Step 1: Primer annealing at a temperature between 15°C and 40°C for 30 seconds
Step 2: cDNA synthesis at a temperature between 42°C and 48°C for 4 minutes
Step 3 (optional): Denaturation of the secondary structure of the RNA template and cDNA synthesis at a temperature between 50°C and 55°C for 30 seconds


Features and Benefits

  •  Convenient lyophilized RT premix: Easy to use, simply add your purifies RNA
  •  Broad range of working temperatures: For RNAs that are G:C rich or significant secondary structure
  •  Novel Cyclic Reverse Transcription: Ensures that you isolate even the rarest transcripts
  •  High yield of cDNA:  For genes up to 9 kb within 10 minutes
  •  Stable for 2 years at -20°C:  Long life
  •  RNase, DNase and Proteinase-free: Ensures the integrity of your samples

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Specifications

3' to 5' exonuclease: No
3’ – A Overhang: No
Fragment size: 9 kb

 

Application

cDNA synthesis



Figure 1. Reaction condition comparison of Cyclic Reverse Transcription versus conventional reverse transcription PCR. 800 ng of HeLa cell total RNA was reverse transcribed using different reaction conditions and then 800 bp, 1.5 kb, 2.0 kb, and 2.6 kb of human transferrin receptor gene were amplified using AccuPower® PCR PreMix.

M: 1 kb DNA Ladder (D-1040)
Lane 1 - 4: Conventional RT with dT20 at 42°C
Lane 5 – 8: Conventional RT with dN12 at 42°C
Lane 9 - 12: Conventional RT with dT20 at 55°C
Lane 13 - 16: Conventional RT with dN12 at 55°C
Lane 17 - 20: Cyclic RT with dT20 by 55°C
Lane 21 - 24: Cyclic RT with dN12 at 55°C




Figure 2. Coxsackie virus A9 (AJ295200) 5’-UTR region amplification with different reverse transcription products. Coxsackie virus RNA was reverse transcribed with different reverse transcription products and then amplified with PCR with AccuPower® PCR PreMix. All materials were used in accordance with manufacturer’s instructions.

M: 100 bp DNA Ladder (D-1030)
Lane 1: Reverse transcription with AccuPower® RT PreMix and oligo dT primer
Lane 2: Reverse transcription with AccuPower® RT PreMix and random primer
Lane 3 – 4, 7 – 8, 11 – 12: Reverse transcription with AccuPower® CycleScript RT PreMix and dT20
Lane 5 – 6, 9 – 10, 13 – 14: Reverse transcription with AccuPower® CycleScript RT PreMix and dN12
Lane 15 – 16: Reverse transcription with RT product from company C and oligo dT primer
Lane 17 – 18: Reverse transcription with RT product from company C and random primer
Lane 19 – 20: Reverse transcription with RT product from company I and oligo dT primer
Lane 21 – 22: Reverse transcription with RT product from company I and random primer




Figure 3. Long transcript production comparison. Reverse transcription was carried out with various reverse transcription products prior to PCR with AccuPower® PCR PreMix.

M: 100 bp DNA Ladder (D-1030)
Bioneer: Bioneer / 1 hour incubation at 55°C
C: Company C / 1 hour incubation at 42°C
I: Company I / 1 hour incubation at 45°C
Lane 1, 3, 5: Product reverse transcribed with oligo dT primer
Lane 2, 4, 6: Product reverse transcribed with random primer
 



Figure 4. Transferrin receptor gene amplification with various reverse transcription products. Reverse transcription was carried out with four different reverse transcription products according to manufacturer’s instructions and then cDNA was amplified with AccuPower® PCR PreMix.

M: 1 kb DNA Ladder (D-1040)
Lane 1 – 5: Reverse transcribed with AccuPower® CycleScript RT PreMix (dT20) / 1 hour at 55°C
Lane 6 – 10: Reverse transcribed with AccuPower® CycleScript RT PreMix (dN12) / 1 hour at 55°C
Lane 11 – 15: Reverse transcribed with Company C product and oligo dT primer / 1 hour at 42°C
Lane 16 – 20: Reverse transcribed with Company C product and random primer / 1 hour at 42°C
Lane 21 – 25: Reverse transcribed with Company I product and dT primer / 1 hour at 45°C
Lane 26 – 30: Reverse transcribed with Company I product and random primer / 1 hour at 45°C
 



Figure 5. Reaction temperatures and time comparison. Data A and B demonstrate high thermal stability of AccuPower® CycleScript RT PreMix.

A: Reverse transcription carried out with AccuPower® CycleScript RT PreMix and dT20
B: Reverse transcription carried out with AccuPower® CycleScript RT PreMix and dN12
Conventional RT #1: 1 hour incubation at 42°C
Cyclic RT #1: Repeat 12 times of 2 minutes at 37°C and 3 minutes at 50°C
Conventional RT #2: 1 hour incubation at 55°C
Cyclic RT #2: Repeat 12 times of 1 minutes at 37°C, 3 minutes at 47°C, and 3 minutes at 55°C
M: 100 bp DNA Ladder (D-1030)
Lane 1, 5, 9, 13, 17, 21, 25, 29: 100 ng of HeLa cell total RNA used for reaction
Lane 2, 6, 10, 14, 18, 22, 26, 20: 10 ng of HeLa cell total RNA used for reaction
Lane 3, 7, 11, 15, 19, 23, 27, 31: 1 ng of HeLa cell total RNA used for reaction
Lane 4, 8, 12, 16, 20, 24, 28, 32: 100 pg of HeLa cell total RNA used for reaction
 



Figure 6. Data C and D demonstrate superior productivity of AccuPower® CycleScript RT PreMix..

C: Reverse transcription carried out with AccuPower® CycleScript RT PreMix and dT20
D: Reverse transcription carried out with AccuPower® CycleScript RT PreMix and dN12
10 min: 2 times of 2 minutes at 37°C and 3 minutes at 50°C
20 min: 4 times of 2 minutes at 37°C and 3 minutes at 50°C
60 min: 12 times of 2 minutes at 37°C and 3 minutes at 50°C
M: 100 bp DNA Ladder (D-1030)
Lane 1, 5, 9, 13, 17, 21: 100 ng of HeLa cell total RNA used for reaction
Lane 2, 6, 10, 14, 18, 22: 10 ng of HeLa cell total RNA used for reaction
Lane 3, 7, 11, 15, 19, 2: 1 ng of HeLa cell total RNA used for reaction
Lane 4, 8, 12, 16, 20, 24, 28, 32: 100 pg of HeLa cell total RNA used for reaction


 

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Manual
AccuPower® CycleScript RT PreMix (dN6)

AccuPower® CycleScript RT PreMix (dN12)

AccuPower® CycleScript RT PreMix (dN20)


MSDS
AccuPower® PCR Master Mixes


Brochure
• AccuPower® PCR Master Mixes - 2010 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

 

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AccuPower® RT-PCR PreMix


cDNA synthesis followed by PCR in one tube



AccuPower® RT-PCR PreMix contains all the components necessary for sequential cDNA synthesis and amplification in one tube (one-step RT-PCR). This RT-PCR PreMix consists of both M-MLV Reverse Transcriptase, RNA dependent DNA polymerase, and a thermostable DNA polymerase in a lyophilized mix of dNTPs, reaction buffer, RNase inhibitor, tracking dye, and stabilizer. The kit can be used for double stranded cDNA synthesis from low copy RNA or mRNA and subsequent RT-PCR .


Features and Benefits

  • Convenient lyophilized RT: Easy to use, simply add your purified RNA
  •  High yield of cDNA: For genes up to 6 kb
  •  Stable for 2 years at -20°C: Long life
  •  RNase, DNase and Proteinase-free: Ensures the integrity of your samples
     
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Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: No
Fragment size: 6 kb

 

Application

cDNA synthesis followed by PCR


Figure 1. Specific amplification of 5' - UTR region of HCV with AccuPower® RT-PCR PreMix.
Human DNA was amplified to generate 0.1-1.5 kb PCR fragments using 1 U of polymerase. The comparison was performed under the same experimental conditions.

Lane 1: DNA Ladder (BM corp.)
Lane 2: Negative control
Lane 3, 4: HCV positive serum
Lane 5: HCV negative serum
 


Figure 2. Sensitivity comparison between AccuPower® RT/PCR PreMix and Supplier I RT-PCR Kit
Each 109 copy – 103 copy of PSTVd used for RT/PCR and the same amount of RT/PCR products used for electrophoresis

Lane1: 109 copy Lane2: 108 copy
Lane3: 107 copy Lane4: 106 copy
Lane5: 105 copy Lane6: 104 copy
Lane7: 103 copy Lane8: NTC
 


Figure 3. Comparison of reproducibility test for AccuPower RT/PCR PreMix batch 1,2,3 and batch 4 products using serial diluted Human Total RNA.
Each 109 copy – 103 copy of PSTVd used for RT/PCR and the same amount of RT/PCR products used for electrophoresis

Lane 1: 10 ng Human total RNA from HeLa cell
Lane 2: 1 ng Human total RNA from HeLa cell
Lane 3: 100 pg Human total RNA from HeLa cell
Lane 4: 10 pg Human total RNA from HeLa cell



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Manual
AccuPower® RT-PCR PreMix


MSDS
AccuPower® PCR Master Mixes


Brochure
• AccuPower® PCR Master Mixes - 2010 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

AccuPower® HotStart PCR PreMix(with UDG)


AccuPower® Hotstart PCR PreMix(with UDG) is a ready-to-use master mix for high-specificity DNA amplification, containing UDG to prevent carryover contamination or crossover contamination

The polymerase chain reaction (PCR) can amplify a single molecule over a billionfold. Thus, even minuscule amounts of a contaminant can be amplified and lead to a false positive result. Such contaminants are often products from previous PCR amplifications (carry-over contamination). Therefore, researchers have developed methods to avoid such contamination AccuPower® Hotstart PCR PreMix(with UDG) is a ready-to-use master mix for high-specificity DNA amplification, con-taining UDG to prevent carryover contamination or crossover contamination The master mix combines the Enzyme - mediated HotStart technology of HotStart DNA polymerase with integrated UDG carryover prevention technology to provide optimal performance with a variety of PCR detection technologies
 

Features and Benefits

  • Prevention of carryover contamination
UDG and dUTP in the MasterMix prevent the re-amplification of carryover PCR products between reactions. dUTP ensures that any amplified DNA will contain uracil, while UDG removes uracil residues from single- or double-stranded DNA, preventing dU-containing DNA from serving as template in future PCRs, A UDG incubation step(37°C,2min) before PCR cycling destroys any contaminating dU-containing product from previous reactions. UDG is then inactivated by the high temperatures during normal PCR cycling, thereby allowing the amplification of genuine target sequences

  • Specificity
Pyrophosphate (PPi) has high affinity for Mg2+. By adding PPi to the reaction mixture, the 2+ ions necessary for normal PCR are bound, preventing DNA polymerase activity. This PPi-Mg2+ binding prevents non-specific before PCR (zero-cycle) product formation. Upon thermal cycling, the pyrophosphatase (PPase) that is also added to the mixture is activated (>70°C) and hydrolyzes the PPi to 2 phosphate groups and facilitates the release of Mg2+, which is then available for DNA polymerase to use and resume normal activity.
  •  Easy-to-use
All reaction components required for PCR, including thermostable DNA polymerase and dNTPs are contained within each tube and in a lyophilized "PreMix" form. The user needs only to add template DNA, primers and water. Materials necessary for loading agarose gels for electrophoresis are also added in the reaction, negating the need to add loading dye after PCR is completed.
  •  Reproducibility
Each batch is produced under strict quality controls. Errors that commonly occur during mass production are eliminated during the individual packaging process. Bioneer’s current batch processing system allows for the production of more accurate and reproducible end-product yield


 

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Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: Yes
Fragment Size: ~ 12 kb

 

Application

Genome template’s PCR
Low-copy target's PCR
Multiple primer pair's PCR
cDNA templates PCR
Molecular Diagnosis


Figure 1. Comparison of specificity between Accupower® HotStart PCR PreMix and HotStart PCR PreMix(with UDG).
Specificity test was operated using 7 pair of primers targeting P53 gene. Reaction mixture was incubated at 37°C for 2min followed by 95°C for 5min, 30 cycles of 20sec at 95°C, 40sec at 55°C, 1min at 72°C. Accupower® HotStart PCR PreMix(with UDG) contains dUTP besides dATP, dGTP, dCTP and dTTP. The amount of DNA(human) used to test is 10ng and size of PCR amplicon size each lane is represented below.
Lane 1: 139bp Lane 2: 211bp
Lane 3: 447bp Lane 4: 618bp
Lane 5: 1082bp Lane 6: 1296bp
Lane 7: 1561bp
M: 100 bp plus DNA ladder (Bioneer Cat. No: D-1030-1)


Figure 2. Comparison of sensitivity between Accupower® HotStart PCR PreMix and HotStart PCR PreMix(with UDG).
Sensitivity test was operated using serial diluted human genomic DNA. Reaction mixture was incubated at 37°C for 2min followed by, 95°C for 5min, 30 cycles of 20sec at 95°C, 20sec at 55°C, 30sec at 72°C. Accupower® HotStart PCR PreMix(with UDG) contains dUTP besides dATP, dGTP, dCTP and dTTP. The amount of DNA used to test is represented below.
Lane 1: 10ng of Human genomic DNA Lane 2: 1ng of Human genomic DNA
Lane 3: 100pg of Human genomic DNA Lane 4: 10pg of Human genomic DNA
M: 100 bp plus DNA ladder (Bioneer Cat. No: D-1030-1)


Figure 3. Comparison of amplification quality using PCR products(not including uracil base) between Accupower® HotStart PCR PreMix and Accupower® HotStart PCR PreMix(with UDG).
Amplification quality test was operated using serial diluted PCR products not including uracil base. Accupower® HotStart PCR PreMix was also tested for negative control. Reaction mixture was incubated at 37/7°C for 2min followed by 95°C for 5min, 30 cycles of 20sec at 95°C, 20sec at 55°C, 30sec at 72°C. Accupower® HotStart PCR PreMix(with UDG) contains dUTP besides dATP, dGTP, dCTP and dTTP. The copy number of PCR products used to test are represented below.
Lane 1: 1011copy Lane 2: 1010copy Lane 3: 109copy
Lane 4: 108copy Lane 5: 107copy Lane 6: 106copy
Lane 7: 105copy Lane 8: 104copy Lane N: No template control
M: 100 bp plus DNA ladder (Bioneer Cat. No: D-1030-1)


Figure 4. Efficiency of uracil DNA glycosylase using PCR product(including uracil base).
Efficiency test of uracil DNA glycosylase was operated using serial diluted PCR products including uracil base. Accupower® HotStart PCR PreMix was also tested for negative control. Reaction mixture was incubated at 37°C for 2min followed by 95°C for 5min, 30 cycles of 20sec at 95°C, 20sec at 55°C, 30sec at 72°C. Accupower® HotStart PCR PreMix(with UDG) contains dUTP besides dATP, dGTP, dCTP and dTTP.
The copy number of PCR products used to test are represented below.
Lane 1: 1011copy Lane 2: 1010copy Lane 3: 109copy
Lane 4: 108copy Lane 5: 107copy Lane 6: 106copy
Lane 7: 105copy Lane 8: 104copy Lane N: No template control
M: 100 bp plus DNA ladder (Bioneer Cat. No: D-1030-1)

 


 

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Manual

AccuPower® Hotstart PCR PreMix(with UDG)


MSDS
AccuPower® Hotstart PCR PreMix(with UDG)

  
Brochure
• AccuPower® PreMix series - 2010 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

AccuPower® PyroHotstart Taq PCR Premix


Bioneer own patented DNA Amplification product with high specificit y.

AccuPower® PyroHotstart Taq PCR PreMix is a PCR master mix containing a thermostable DNA polymerase, thermostable pyrophosphatase, reaction buffer, dNTPs, tracking dye, and patented stabilizer in a ready to use hotstart PCR master mix. Bioneer uses a unique enzyme-mediated HotStart PCR that provides robust and reliable results. Bioneer's Taq DNA Polymerase is inhibited at lower temperatures (< 70°C) by pyrophosphate. However, Taq DNA Polymerase is rendered fully active at temperatures above 70°C via pyrophosphate hydrolysis with our thermostable pyrophosphatase. This prevents the formation of mis-primed products and primer-dimers during the reaction set up process resulting in improved PCR specificity. It is ideal for nucleic acid amplification reactions involving complex genomic or cDNA templates, very low copy targets, and multiplex reactions.
 

Features and Benefits

  • Specificity
Pyrophosphate (PPi) has high affinity for Mg2+. By adding PPi to the reaction mixture, the Mg2+ ions necessary for normal PCR are bound, preventing DNA polymerase activity. This PPi-Mg2+ binding prevents non-specific before PCR (zero-cycle) product formation. Upon thermal cycling, the pyrophosphatase (PPase) that is also added to the mixture is activated (>70°C) and hydrolyzes the PPi to 2 phosphate groups and facilitates the release of Mg2+, which is then available for DNA polymerase to use and resume normal activity

    
 

  • Stability

Stable at room temperature for a month and for 2 years in a -20°C freezer
 

  • Ease-of-Use

All reaction components required for PCR, including thermostable DNA polymerase and dNTPs are contained within each tube and in a lyophilized "PreMix" form. The user needs only to add template DNA, primers and water. Materials necessary for loading agarose gels for electrophoresis are also added in the reaction, negating the need to add loading dye after PCR is completed.
 

  • Reproducibility
Each batch is produced under strict quality controls. Errors that commonly occur during mass production are eliminated during the individual packaging process. Bioneer’s current batch processing system allows for the production of more accurate and reproducible end-product yield



 

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Specifications

5' to 3' exonuclease: Yes
3' to 5' exonuclease: No
3' – A Overhang: Yes
PCR product size: ~ 5 kb(Human)

 

Application

- High specificity PCR
- High sensitivity PCR
- Low-copy target PCR
- Multiple primer pairs PCR
- cDNA template PCR
- T-A cloning

 

Experimental data

Figure 1. Comparison of PCR amplification specificity between AccuPower® PyroHotStart Taq PCR PreMix from Bioneer and other suppliers' Hot start PCR master mix.

PCR reactions were performed according to each supplier's protocol. The PrP gene was amplified from human genomic DNA with two different primer sets, separately. This data shows that AccuPower® PyroHotStart Taq PCR PreMix has higher amplification efficiency and specificity than other suppliers' Hot start PCR master mix.
Lane M: 100 bp DNA Ladder(Bioneer, Cat. No.D-1030)
Lane 1: 100 ng DNA, PrP primer set (500 bp)
Lane 2: 10 ng DNA, PrP primer set (500 bp)
Lane 3: 100 ng DNA, PrP primer set (705 bp)
Lane 4: 10 ng DNA, PrP primer set (705 bp)


Figure 2. Comparison of PCR amplification specificity between AccuPower® PyroHotStart Taq PCR PreMix from Bioneer and other suppliers' Hot start PCR master mix.

The ApoE gene was amplifed from 100 ng of human genomic DNA (The PCR product size is 268bp). This data shows that AccuPower® PyroHotStart Taq PCR PreMix has higher amplificition efficency and specificity than other suppliers' Hot start PCR master mix.
Lane M: 100 bp DNA Ladder (Bioneer, Cat. No. D-1030)
Lane 1: AccuPower® PyroHotStart Taq PCR PreMix
Lane 2: Supplier I Hotstart Taq PCR preMix
Lane 3: Supplier S Hotstart Taq PCR masterMix
Lane 4: Supplier T Hotstart Taq PCR masterMix
Lane 5: Supplier Q Hotstart Taq PCR masterMix


Figure 3. AccuPower® PyroHotStart Taq PCR PreMix has high amplification efficiency and specificity.

Specificity test was performed using 7 different sets of primers targeting the P53 gene. 10 ng of human genomic DNA was used for each PCR reaction. The cycling conditions were 95°C for 5min, 30 cycles of 95°C for 20 sec, 55°C for 40 sec, and 72°C for 1 min, and 72°C for 5 min for final extension.
Lane M: 100bp DNA Ladder (Bioneer, Cat. No. D-1030)
Lane 1: P75/73 primer set (139 bp)
Lane 2: P55/53 primer set (211 bp)
Lane 3: P55/63 primer set (447 bp)
Lane 4: P75/83 primer set (618 bp)
Lane 5: P55/73 primer set (1082 bp)
Lane 6: P65/83 primer set (1296 bp)
Lane 7: P55/83 primer set (1561 bp)


Figure 4. Comparison of PCR amplification between AccuPower® PyroHotStart Taq PCR PreMix from Bioneer and other suppliers' Hot start PCR master mix.

Sensitivity test was performed by amplifying the IRGC gene from a serial dilution of human genomic DNA. This data shows that AccuPower® PyroHotStart Taq PCR PreMix has higher amplification efficiency than other suppliers' Hot start PCR master mix.
Lane M: 100 bp DNA Ladder (Bioneer, Cat. No. D-1030)
Lane 1: 10 ng human genomic DNA
Lane 2: 1 ng human genomic DNA
Lane 3: 100 pg human genomic DNA
Lane 4: 10 pg human genomic DNA



Figure 5. Comparison of cDNA template amplification between AccuPower® PyroHotStart Taq PCR PreMix and other suppliers' Hot start PCR master mix.

cDNA synthesized from 10-fold serial-diluted human total RNA from 10 ng to 10 pg using AccuPower® RocketScript™ Cycle RT PreMix (Bioneer, Cat. No. K-2201) was used as a template for PCR amplification. This data shows that AccuPower® PyroHotStart Taq PCR PreMix has higher amplification efficiency than other suppliers' Hot start PCR master mix.
Lane M: 100 bp DNA Ladder (Bioneer, Cat. No. D-1030)
Lane 1: 10 ng human total cDNA
Lane 2: 1 ng human total cDNA
Lane 3: 100 pg human total cDNA
Lane 4: 10 pg human total cDNA




 

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Manual
manual-PyroHotstart-Taq-PCR-PreMix


MSDS
AccuPower® PyroHotstart Taq PCR PreMix


Brochure
• AccuPower® PreMix series - 2010 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

Realtime qPCR PreMix


AccuPower® Dualstar™ qPCR PreMix


The Real-Time PCR Reagents for the Sequence-specific Probe-Based Detection



The Dualstar™ qPCR PreMix provides significant reduction of nonspecific reaction, high sensitivity, extended stability and great universality. Just additions of primers and fluorescent dye labeled probe of your interesting target gene into Dualstar™ qPCR PreMix provide always reproducible results with convenience of use.


Features and Benefits

  • User Convenience: Just add probe and primer for target gene.
  • Extended Stability: In a freezer, the activity of this product is stable for 2 years.
  • Reproducibility: Margin of error was minimized and reproducible results can be obtained, because no extra mixing step is requied.
  • High Specificity: A Non-specific reaction by Enzyme-mediated Hotstart Technology was dramatically eliminated(patent 292883 & 10-2007-109055)
  • Equipment Compatibility: Optimized results on various Real-Time PCR instruments can be obtained.
  • Universality of target gene: Significant results can be obtained regardless of kinds of target genes.
]]>
Specifications

5' to 3' exonuclease: Yes
3' to 5' exonuclease: No
3’ – A Overhang: Yes
Fragment size: ~1 kb

 

Application

Real-Time quantification of DNA and cDNA targets, gene expression profiling, microbial & viral pathogen detection, evaluation of probe-based real-time PCR system


Figure 1. Real-Time PCR Data of AccuPower® Dualstar™ qPCR PreMix

AccuPower® Dualstar™ qPCR PreMix provides at least 7 orders of magnitude in dynamic range (107 ~ 101 copies/reaction).
A : Amplification curve. West Nile Virus (WNV) primers and TaqMan-based probe were added into Dualstar qPCR Premix.
A series of WNV positive control diluents were tested.
B : Standard curve. All data were obtained using Exicycler™ 96 Real-Time Quantitative Thermal Block (Bioneer Co.).


Figure 2. Data using various kinds of Real-Time PCR Instruments (ABI 7500 Fast, ABI 7500, Opticon Real-Time PCR instruments)

AccuPower® Dualstar™ qPCR PreMix provides at least 7 orders of magnitude in dynamic range (107 ~ 101 copies/reaction).
A : Amplification curve. West Nile Virus (WNV) primers and TaqMan-based probe were added into Dualstar qPCR Premix.
A series of WNV positive control diluents were tested.
B : Standard curve. All data were obtained using Exicycler™ 96 Real-Time Quantitative Thermal Block (Bioneer Co.).

Notice to Purchaser

FOR RESEARCH USE ONLY. NOT FOR USE IN DIAGNOSTIC PROCEDURES.

The lyophilized composition of this product is covered by US Patent Nos. 5861251 and 6153412 of Bioneer Corporation. Certain applications of this product are covered by pending or issued patents in certain countries. Because purchase of this product does not include a license to perform any patented application, users of this product may be required to obtain a patent license depending upon the particular application and country in which the product is used. Products may be covered by pending or issued patents. Please contact us for more information

Trademark: 'AccuPower®' is a registered trademark of Bioneer Corporation. 'DualStar™' is a trademark of Bioneer Corporation.

* Some of the products may not be available in some countries, For details, please contact your local distributor.

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Manual
AccuPower® Dualstar™ qPCR PreMix


MSDS
AccuPower® Dualstar™ qPCR PreMix


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

R]]>

AccuPower® Greenstar™ qPCR PreMix


The Real-Time PCR Reagents for the SYBR® Green-Based Detection



The Greenstar™ qPCR PreMix provides significant reduction of nonspecific reaction, high sensitivity, extended stability and great universality. Just additions of primers of your interesting target gene into Greenstar™ qPCR PreMix provide always reproducible results with convenience of use.


Features and Benefits

  • High Specificity: A Non-specific reaction by Enzyme-mediated Hotstart Technology was dramatically eliminated(patent 292883 & 10-2007-109055)
  • User Convenience:  Just add primer for target gene.
  • Extended Stability: In a freezer, the activity of this product is stable for 2 years.
  • Reproducibility: Margin of error was minimized and reproducible results can be obtained, because no extra mixing step is requied.
  • Equipment Compatibility: Optimized results on various Real-Time PCR instruments can be obtained.
  • Universality of target gene: Significant results can be obtained regardless of kinds of target genes.



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Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: Yes
Fragment Size: ~1 kb


Application

- Real-Time Quantification of DNA/cDNA targets.
- Quantification of gene expression
- Microbial/Viral Pathogen Detection.


Figure 1. Real-Time PCR Data of AccuPower® Greenstar™ qPCR PreMix

AccuPower® Greenstar™ PreMix provides at least 7 orders of magnitude in dynamic range (10 fg ~ 10 ng /reaction).
A : Amplification curve. Lambda DNA primers were added into Greenstar™ qPCR PreMix. A series of Lambda DNA positive control diluents were tested.
B : Standard curve. Data were obtained using Exicycler™ 96 Real-Time Quantitative Thermal Block (Bioneer Co.).
C : Melting curve.


Figure 2. Comparison of amplification quality between AccuPower® Greenstar™ qPCR PreMix and other supplier's master mixture.

Amplification & Standard curve of AccuPower® Greenstar™ qPCR PreMix and other supplier’s master mixture.
Lambda DNA primers were added into AccuPower® Greenstar™ qPCR PreMix and other supplier’s master mixture. A series of Lambda DNA positive control diluents were tested. Reaction mixtures were prepared and qPCR was performed according to each supplier’s protocol.
All data were obtained using ABI 7500 Fast Real-Time PCR machine (Applied Biosystems co.).


Notice to Purchaser

FOR RESEARCH USE ONLY. NOT FOR USE IN DIAGNOSTIC PROCEDURES.

The lyophilized composition of this product is US Patent Nos. 5861251 and 6153412. Certain applications of this product are covered by pending or issued patents in certain countries. Because purchase of this product does not include a license to perform any patented application, users of this product may be required to obtain a patent license depending upon the particular application and country in which the product is used. Products may be covered by pending or issued patents. Please contact us for more information.

Note: 'Top DNA Polymerase' of this product is specifically optimized for increasing base incorporation rate by inactivating 5'->3' exonuclease activity. Therefore, this is not recommended to use for Real Time PCR using Taqman Probe, for which AccuPower® Greenstar™ qPCR PreMix.

Trademark: 'AccuPower®' is a registered trademark of Bioneer Corporation. 'DualStar™' is a trademark of Bioneer Corporation.

* Some of the products may not be available in some countries, For details, please contact your local distributor.



 

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Manual
AccuPower® Greenstar™ qPCR PreMix


MSDS
AccuPower® Greenstar™ qPCR PreMix


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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AccuPower® 2X Greenstar™ qPCR Master Mix


Ready-to-use cocktail containing all components,except primer, for the amplification and detection of DNA in real-time quantitative PCR(qPCR)


The AccuPower® 2X Greenstar qPCR Master Mix is a ready-to-use cocktail containing all components,except primer, for the amplification and detection of DNA in real-time quantitative PCR(qPCR). It combines the automatic "Hotstart" technology of Top DNA polymerase and SYBR Green I fluorescent dye to deliver excellent sensitivity in the quantification of target sequences, with a linear dose response over a wide range of target concentration. Volumes are provided for 100 or 200 amplification reactions of 50ul each.

 

Features and Benefits

  • High Specificity :  AccuPower® 2X Greenstar qPCR Master Mix provides more accurate Real-time PCR result by application of Hot-start method.
  • Stability:  The chemical stabilizer maintains enzyme activity for 2 years at -20°C
  • Simplicity: Ready to use, AccuPower® 2X Greenstar qPCR Master Mix contains everything of Real-time PCR excluding primer and template.
  • Reproducibility:  Bioneer's strict quality controlled production system ensures that your results will be reproducible experiment after experiment
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Applications

- Real-time quantification of DNA and cDNA targets
- Gene expression profiling
- Microbial & Viral pathogen detection

 

Experimental Data


 

Step Condition Cycle
Pre-Denaturation 95°C, 15min 1
Denaturation 95°C, 15sec 45
Annedling/Extension 60°C, 30sec
Detection(Scan)  
Melting 65°C~90°C, every 1°C, 1sec 1

 

PCR reaction mixture Perreaction
2X Greenstar Master Mix 25ul
PCR F-Primer (10 pmole) 1.5ul
PCR R-Primer (10 pmole) 1.5ul
Template 5ul
DEPC-distilledwater. A djust to 50ul

 

Copy C(t) Value
Batch 1 Batch 2 Batch 3 Error Rate
NTC UD UD UD 0.5 C(t)
10 36.33 36.74 35.54
100 32.22 31.77 31.73
1000 28.51 28.7 28.04
10000 25.09 25.12 24.73
100000 21.27 21.43 21.47
1000000 18.12 18.13 18.04
10000000 14.99 14.43 14.45

 

Fig 1. Highly reproducible Ct values
Amplification of an 90-bp target gene was detected using serially diluted LP(Legionella Pneumoniae) genomic DNA (from 106 copies to 101 copies ) with AccuPower® 2X Greenstar qPCR Master mix.
As shown in Fig. Highly reproducible Ct values were achieved within each Lot. set of triplicates



Fig 2. Comparison of the Specificity of the SYBR® Green assay
Amplification of an 90-bp target gene was detected using serially diluted LP(Legionella Pneumoniae) genomic DNA (10n dilution;105~101copies) with AccuPower® 2X Greenstar qPCR Master mix.
As shown in Fig. Very small amount of primer dimers was appeared in AccuPower® 2X Greenstar qPCR Master mix than other kits.

Using a Bioneer Exicycler™ 96

- The annealing temperature can be set to 55~65°C, depending on the primer Tm value.
- The annealing time should be set for 5~20 seconds.
  Longer annealing time results in increased efficiency, and a shorter time decreases non- 
  specific amplification.


 

Target Gene hGAPDH hPTGS2
Sample No. 1 2 1 2
C(t) Value 23.73 23.46 33.98 30.52

Fig 3. Gene Expression Analysis
AccuTarget™ Validated Real-Time PCR Primer Library for Human is designed by Bioneer’s bioinformatics tool and targeting for human genome. cDNA was synthesized using Human PTGS2 target primer of those and Human total RNA identically quantified from Hela cell and blood cell with AccuPower® CycleScript RT PreMix(K-2044, Bioneer). Gene analysis was carried out both Hela cell and blood cell by operating Real-time PCR reaction(95°C 10 min, 1 cycle and 95°C 10 sec, 58°C 25 sec, 72°C 30 sec, 41 cycles) using the cDNA, AccuPower® 2X Greenstar qPCR Master Mix and Exicycler™ 96 Real-Time Thermal Block(Cat. No. A-2060).

 

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Manual
AccuPower® 2X Greenstar master mix solution


MSDS
AccuPower® 2X Greenstar master mix solution


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

 

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AccuPower® Plus Dualstar™ qPCR PreMix


Best real time PCR kits for Probe – AccuPower® Plus Dualstar™ qPCR PreMix, 2X Master Mix

AccuPower® Plus Dualstar™ qPCR PreMix is a kit for providing accurate data from your various samples speedily. There are no additional mixing steps because it already prepared and dried for your convenient. This product makes you monitor your gene amplification of Ct in every steps of amplified florescent cycle because we add “probe” which include florescence oligo-nucleotide and primers. In addition, AccuPower® Plus Dualstar™ qPCR PreMix can store for two years in your -20°C freezer and you satisfy with this because we provide several different types of tube and plate depends of various qPCR machine.


Features and Benefits

  • User Convenience: For this you can add probe and primers for your target gene simply. In addition, you can satisfy your result by using this kit for several different types of qPCR machine.
  • Dynamic Range: There are wide ranges of copies like 8 log from 10 to 108 copies.
  • Specificity: You can get the best amplification result with your target gene by using Hotstart Taq DNA polymerase 
  • Universality of target gene: You always achieve great real time PCR result even though you use various types of DNA, cDNA, high GC template and more.
  • Easy-to-use: In this kit, we provide the product formation like freeze-dried premix or master mix type included thermostable DNA polymerase, dNTPs and provide separately and individually. Therefore, the users add only Template, Primers and DEPC distilled water when you run your real time PCR.
  • Reproducibility: Under ISO 9001 Quality Assurance System, our mass produced product AccuPower® Plus Dualstar™ qPCR PreMix, 2X Master mix give you great satisfactory with uniform amplified effectiveness in all your reaction tube. 
     

 

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Enzyme Properties

5' to 3' exonuclease activity: Yes
3' to 5' exonuclease activity: No
3’ – A Overhang: Yes
Fragment Size: -

 

Application

- Gene expression profiling
- Target DNA quantification
- Microbial detection
- Viral/bacterial pathogen load determination
- Evaluation of primer pair performance for probe-based real-time PCR

 

Storage Temperature

-20°C

 

Experimental Data



Figure 1. High specificity of AccuPower® Plus DualStar™ qPCR PreMix




Figure 2. Comparison of amplification quality between AccuPower® Plus DualStar™ qPCR PreMix and other supplier's Real time qPCR kit.


Figure 3. Five-target multiplexing on the Exicycler™ instrument using AccuPower® Plus DualStar™ qPCR PreMix
Figure 3 shows amplification of a 5-target multiplex assay. The dyes used were FAM, TET, CY5, Texas Red and TAMRA, respectively. The data demonstrate that over a dilution series of input template, the AccuPower® Plus DualStar™ qPCR PreMix can successfully and reliably generate up to 5-target multiplex data on the Exicycler™.

Figure 4. PCR inhibitor study using AccuPower® Plus DualStar™ qPCR PreMix

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Manual
AccuPower® Plus Dualstar™ qPCR PreMix


MSDS
AccuPower® Plus Dualstar™ qPCR PreMix


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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AccuPower® RocketScript RT-qPCR PreMix


One-step RT-qPCR PreMix (Taqman Probe Method) – AccuPower® RocketScript™ RT-qPCR PreMix, 2X Master mix is used new concept of Hotstart RT technique.


AccuPower® RocketScript™ RT-qPCR PreMix (South Korea patent#: 10-2012-0024676) is a improved kits from RT reaction problem. Through this kit, you perform cDNA synthesis of your selective RNA and provide improved sensitivity from small amount of template RNA. In addition, you can get accuracy of your cDNA synthesis by performing PCR via using one-step reaction. Therefore, this is an excellent high sensitivity One-step RT-qPCR product and utilizes the several types of virus test and gene expression real time analysis experiment. Furthermore, this product is ready to use. You just add Template RNA, Primer and Probe with great reproducibility. This product included Dual-labeled Probe (such as, Florescence) and Primer set. Therefore, you can measure Ct in every cycle and monitor your gene’s real time amplification. In addition, we provide the tubes and plate that you can use not only Exicycler™ 96 but also other similar real time PCR machine. Additionally we provide 2X Master mix type for your convenient.

 

Features and Benefits
 

  • Sensitivity: You can get great result with smallest amount of your target template and high concentrated RNA product. We have wide dynamic range such as 10 ~ 1010 copies
  • Specificity: This product is idealized to get accurate target gene by using our premier Dual Hotstart RT-qPCR reaction which utilizing Pyro-Hotstart RT reaction and Hotstart PCR.
  • Multiplexing: This product can use with several different dye (Probe) so, you can use several types of target gene. Exicycler™96 Real-Time Quantitative Thermal Block From Bioneer.
  • Use of various Template RNA: You can get amazing real time RT-qPCR result since it includes RocketScript™ RTase which provide RT reaction in high temperature. So you can use various template RNA even though it has highly formed secondary structure template RNA
  • Applicable with several different types of samples: This contains various PCR inhibitors so you can use and get accurate RT qPCR result with template RNA from blood and soil.
  • Easy-to-use: This kit provides AccuPower® RocketScript™ RT-qPCR PreMix (freeze and dried) or AccuPower® RocketScript™ RT-qPCR Master Mix (freezed 2X Master mix) which included thermostable DNA polymerase, RTase, dNTPs and more for Real time RT-PCR performance. User only adds template RNA, Primers & Probe and DEPC distilled water in this kit.
  • Reproducibility: Under ISO 9001 Quality Assurance System, our mass produced product AccuPower® RocketScript™ RT-qPCR PreMix, 2X Master mix give you great satisfactory with uniform amplified effectiveness in all your reaction tube.
     
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Enzyme Properties

5' to 3' exonuclease activity: Yes
3' to 5' exonuclease activity: No
3’ – A Overhang: Yes
Fragment Size: -

 

Application

- Gene expression profiling
- Target DNA quantification
- Microbial detection
- Viral/bacterial pathogen load determination

 

Storage Temperature

-20°C

 

Experimental Data

Figure 1. High sensitivity of AccuPower® RocketScript™ RT-qPCR PreMix.
Experiment with HIV target. 10 fold serial dilution of Template RNA (1010 copies ~ 10 copies spiked in Human Total RNA).

Figure 2. High specificity of AccuPower® RocketScript™ RT-qPCR PreMix. Experiment with HCV target. 10 fold serial dilution of Template RNA (106 copies ~ 10 copies).
spiked in Human Total RNA.. Conventional Hotstart qPCR always generate non-specific amplification at low template concentration, which deteriorate the sensitivity of qPCR. Dual Hotstart RT-qPCR accurately amplifies target RNA without non-specific amplification, even at low concentration of template



Figure 3. PCR inhibitor (Humic acid) study using AccuPower® RocketScript™ RT-qPCR PreMix.
 



Figure 4. PCR inhibitor (EDTA, Hemoglobin) study using AccuPower® RocketScript™ RT-qPCR PreMix









 

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Manual
AccuPower® RocketScript™ RT-qPCR PreMix


MSDS
AccuPower® RocketScript™ RT-qPCR PreMix


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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Ligation


AccuPower DNA Ligation PreMix


Ready-to-use dna ligation master mix with T4 DNA Ligase



The AccuPower® DNA Ligation PreMix is a lyophilized master mix containing T4 DNA Ligase, ATP, reaction buffer, and patented stabilizer. This DNA ligation premix is conveniently aliquoted in strip-tubes for reactions; you need only add DNAs to be ligated and water. The reaction will work for DNA ligation for all applications: blunt cloning, sticky end cloning and TA cloning. The premix is stable up to four months at room temperature and for three years at -20°C.

Features and Benefits

  • Ready to use premix: Minimal set up time and handling required
  • Fast: Only 5 minutes for cohesive-end ligation and 10 minutes for blunt-end ligation at room temperature
  • Stable: Enzyme activity for up to four months at room temperature and for three years in the freezer

 

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Application

Cloning into vectors, library construction, TA cloning, linker ligation, and re-circlization of linear DNA


Figure 1. Stability test of AccuPower® DNA Ligation PreMix at room temperature.

Lane 1 – 12: Lambda DNA / Hind lll fragment (1 µg)
Lane 12 – 24: Lambda DNA / EcoR V fragment (1 µg)
Lane 2, 3, 14, 15: Ligation with AccuPower® Ligation PreMix stored at room temperature for 1 month
Lane 5, 6, 17, 18: Ligation with AccuPower® Ligation PreMix stored at room temperature for 2 months
Lane 8, 9, 20, 21: Ligation with AccuPower® Ligation PreMix stored at room temperature for 3 months
Lane 11, 12, 23, 24: Ligation with AccuPower® Ligation PreMix stored at room temperature for 4 months


Figure 2. DNA Ligation efficiency comparison between AccuPower® DNA Ligation PreMix and other competitors’ products.

Lane 1, 9: Intact Lambda DNA (1 µg)
Lane 2 – 8: Lambda DNA / Hind lll fragment (1 µg)
Lane 10 – 16: Lambda DNA / EcoR V fragment (1 µg)
Lane 3, 4, 11, 12: Ligation with AccuPower® Ligation PreMix
Lane 5, 13: Ligation with T4 DNA Ligase from company N
Lane 6, 14: Ligation with Quick Ligation Kit from company N
Lane 7, 15: Ligation with LigFast Rapid DNA Ligation System from company P
Lane 8, 16: Ligation with Ready-To-Go T4 DNA Ligase from company A

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Manual
AccuPower® DNA Ligation PreMix


MSDS
AccuPower® PCR Master Mixes


Brochure
DNA Ligation 2010 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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DNA Polymerase


Ligase


Top DNA Polymerase


Enzymes for everyday PCR, faster than Taq DNA Polymerase, and TA Cloning compatible

Top DNA polymerase is a novel thermostable DNA polymerase that is more processive than Taq DNA polymerase. In fact, the extension rate of Top DNA Polymerase is > 3 x that of Taq DNA Polymerase! Top DNA Polymerase can be used for a variety of PCR applications (including TA cloning) and is a robust enzyme for everyday PCR. It contains no proofreading or 5’-3’ Exonuclease activity.
 

Features and Benefits

  •  Fast: More than three times more processive than standard Taq DNA Polymerase
  •  High performance: Amplifies fragments up to 10 kb
  •  Value:  No license fee to pay!
     

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Enzyme Properties

5' to 3' exonuclease activity: No
3' to 5' exonuclease activity: No
3’ – A Overhang: Yes
Fragment Size: Up to 10 kb

 

Application

Standard PCR, primer extension, TA cloning and gene sequencing

 

Reagents Supplied

10 x Reaction Buffer with (or without) MgCl2: Tris (pH 9.0), 15 mM MgCl2, etc
1 x Dilution Buffer: 50% glycerol containing 20 mM Tris-HCl, 0.5 mM EDTA, 1 mM DTT, 100 mM KCl, stabilizers, pH 8.0
dNTP Mix: 2.5 mM of each dNTP

 

Concentration

5 U/μl

 

Storage Conditions

50% glycerol containing 20 mM Tris-HCl, 0.5 mM EDTA, 1 mM DTT, 100 mM KCl, stabilizers, pH 8.0

 

Store Temperature

-20°C

 

Unit Definition

One unit is defined at the amount of enzyme that will incorporate 10 nmole of dNTP into acid-insoluble material in 30 minutes at 72°C.



Figure 1. Sensitivity test of Top DNA polymerase and Taq DNA polymerase using Lambda genomic DNA.
Each fragment was amplified from a template dilution series (100 ng to 10 fg DNA per reaction) using 1 U of each DNA Polymerase.

Lane MW : 1 kb DNA Ladder (D-1040)
Lane 1: 100 ng Lambda genomic DNA
Lane 2: 10 ng Lambda genomic DNA
Lane 3: 1 ng Lambda genomic DNA
Lane 4: 100 pg Lambda genomic DNA
Lane 5: 10 pg Lambda genomic DNA
Lane 6: 1 pg Lambda genomic DNA
Lane 7: 100 fg Lambda genomic DNA
Lane 8: 10 fg Lambda genomic DNA



Figure 2. Sensitivity test of Top DNA Polymerase and Taq DNA polymerase using bacterial and human genomic DNA.
A 500 bp fragment was amplified from a bacterial genomic DNA dilution series (Lane 1-4: 1 ng to 1 pg per reaction) and a 220 bp fragment was amplified from a human genomic DNA dilution series (Lane 5-8: 10 ng to 10 pg per reaction).
1 U of each DNA Polymerase was used for all reactions.

Lane MW : 100 bp plus DNA Ladder (D-1035)
Lane 1: 1 ng bacterial genomic DNA
Lane 2: 100 pg bacterial genomic DNA
Lane 3: 1 ng Lambda genomic DNA
Lane 4: 1 pg bacterial genomic DNA
Lane 5: 10 ng human genomic DNA
Lane 6: 1 ng human genomic DNA
Lane 7: 100 pg human genomic DNA
Lane 8: 10 pg human genomic DNA



Figure 3. Enzyme activity test of Top DNA Polymerase and Taq DNA polymerase.
Top DNA polymerase/ Taq DNA polymerase was serially diluted and used to amplify 20 ng of each Lambda and human genomic DNA.

Lane MW : 100 bp plus DNA Ladder (D-1035)
Lane 1: 1 U of Top DNA Polymerase used
Lane 2: 0.5 U of Top DNA Polymerase used
Lane 3: 0.33 U of Top DNA Polymerase used
Lane 4: 0.25 U of Top DNA Polymerase used
Lane 5: 1 U of Taq DNA Polymerase used
Lane 6: 0.5 U of Taq DNA Polymerase used
Lane 7: 0.33 U of Taq DNA Polymerase used
Lane 8: 0.25 U of Taq DNA Polymerase used



Figure 4. Long PCR amplification test of Top DNA Polymerase and Taq DNA Polymerase using Lambda DNA.
10 ng of Lambda DNA and 1 U of each DNA Polymerase used for amplification.

M1: 1 kb DNA Ladder (D-1040)
M2: Lambda DNA/Hind lll Marker (D-1050)
Lane 1: 2 kb PCR product
Lane 2: 2 kb PCR product
Lane 3: 2 kb PCR product
Lane 4: 2 kb PCR product
Lane 5: 2 kb PCR product
Lane 6: 2 kb PCR product
Lane 7: 2 kb PCR product
Lane 8: 2 kb PCR product
Lane 9: 2 kb PCR product



Figure 5. Sensitivity test using Real-time qPCR with SYBR Green and Top DNA Polymerase.
The standard curve shows a high correlation of R2 = 0.9993.

Lane MW : 100 bp plus DNA Ladder (D-1035)
Lane 1: 1 ng bacterial genomic DNA
Lane 2: 100 pg bacterial genomic DNA
Lane 3: 1 ng Lambda genomic DNA
Lane 4: 1 pg bacterial genomic DNA
Lane 5: 10 ng human genomic DNA
Lane 6: 1 ng human genomic DNA
Lane 7: 100 pg human genomic DNA
Lane 8: 10 pg human genomic DNA


 






 

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Manual
Top DNA Polymerase (E3100)

Top DNA Polymerase (E3100-1)

Top DNA Polymerase (E3100-2)

Top DNA Polymerase (E3100-3)


MSDS
D-3001

Top DNA Polymerase

Top DP-dilution buffer

Top DP-reaction buffer

20mM MgCl2


Brochure
• Enzymes 2010 Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

• EC Directive 98/79/EC - certificate


 

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HotStart DNA Polymerase


Unique enzyme-mediated Hot Start DNA Polymerase

Bioneer’s HotStart DNA polymerase uses an exclusive enzyme-mediated Hot Start PCR method that, unlike most other HotStart PCR chemistries, completely releases all polymerase activity during the first denaturation step. Top DNA polymerase is completely inhibited by pyrophosphate at temperatures below 70°C. However, at temperatures above 70°C, a thermostable pyrophosphatase initiates pyrophosphate hydrolysis and activates the DNA polymerase. This prevents the formation of non-specific products and primer-dimers during the reaction set-up process and results in improved PCR specificity.

Features and Benefits

  •  Fast:More than three times more processive than standard Taq DNA Polymerase
  •  High performance:Amplifies fragments up to 12 kb
  •  Value:No license fee to pay!
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Enzyme Properties

5' to 3' exonuclease activity: No
3' to 5' exonuclease activity: No
3’ – A Overhang: Yes
Fragment Size: Up to 12 kb

 

Application

Hot Start PCR, PCR with complex genomic templates/low copy templates/cDNA
Multiplex PCR
Primer extension
SNP typing
Real-Time PCR using SYBR Green dye
Multiple primer pairs and amplification of low copy template DNA

 

Reagents Supplied

10 x Reaction Buffer : Tris-HCl, KCl, Pyrophosphate, pH 9.0
1 x Dilution Buffer : 50% glycerol containing 50 mM Tris-HCl, 0.1 mM EDTA, 1 mM DTT, stabilizers, pH 8.2
dNTP Mix : 2.5mM of each dNTP
20 mM MgCl2



Concentration

5 U/μl

 

Storage Conditions

50% glycerol containing 20 mM Tris-HCl, 0.5 mM EDTA, 1 mM DTT, 100 mM KCl, stabilizers, pH 8.0

 

Store Temperature

-20°C

 

Unit Definition

One unit is defined at the amount of enzyme that will incorporate 10 nmole of dNTP into acid-insoluble material in 30 minutes at 72°C.


Figure 1. Multiplex PCR comparison of genomic DNA using 6 sets of primers and 2 different DNA Polymerases.

Lane M: 100 bp DNA Ladder (D-1030)
Lane 1: 750 bp fragment
Lane 2: 590 bp fragment
Lane 3: 450 bp fragment
Lane 4: 360 bp fragment
Lane 5: 260 bp fragment
Lane 6: 150 bp fragment
Lane 7: Multiplex PCR with primers used for Lane 1 – 6

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Manual

HotStart DNA Polymerase


MSDS

Hotstart DNA Polymerase

Hotstart DP dilution buffer

Hotstart DP reaction buffer


Brochure

• Enzymes 2010 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

• EC Directive 98/79/EC - certificate

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Taq DNA Polymerase


Versatile DNA polymerase for everyday routine PCR



Taq DNA Polymerase is a thermostable DNA polymerase that catalyzes the polymerization of nucleotides into duplex DNA in the 5' -> 3' direction. Bioneer's Taq DNA Polymerase is isolated from recombinant E.coli strain containing the DNA polymerase gene from Thermus aquaticus YT1. It exhibits its highest activity at pH 9.0 and 72°C.

Features and Benefits

  • Improved yield & sensitivity:  Perform high yield and high sensitivity PCR using Bioneer Taq DNA polymerase.
  • Versatility: Use for a wide range of DNA amplifications including Real-Time PCR using TaqMan probe or SYBR Green.
  • Robust performance:  Optimized reaction buffer enhances PCR performance.

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Enzyme Properties

Concentration: 5 U/ul
5' to 3' exonuclease activity: Yes
3' to 5' exonuclease activity: No
3’ – A Overhang: Yes
Nuclease contamination: No
Extension rate: 3-10 kb/min depending on template complexity
Fragment Size: Up to 10 kb
 

Application

- Routine PCR
- SYBR-Green-based qPCR
- Dual-labeled probe based qPCR
- Primer extension
- TA cloning
- Gene sequencing
- Gene expression profiling
- Microbial & viral pathogen detection


Kit Contents

Cat. No. Taq DNA Polymerase 10 x Rxn Buffer Dilution Buffer dNTP Mixture MgCl2 Sol.
E-2011 500 units 1 ml (with MgCl2) 1 ml 1 ml -
E-2011-1 500 units 1 ml (without MgCl2) 1 ml 1 ml 1 ml
E-2011-2 500 units 1 ml (with MgCl2) 1 ml - -
E-2011-3 500 units 1 ml (without MgCl2) 1 ml - 1 ml

- 10 x Reaction Buffer without MgCl2: 100 mM Tris-HCl, 400 mM KCl, pH 9.0
- 10 x Reaction Buffer with MgCl2: 100 mM Tris-HCl, 400 mM KCl, 15 mM MgCl2, pH 9.0
- Dilution Buffer: 20 mM Tris-HCl, 0.5 mM EDTA, 1 mM DTT, 100 mM KCl, stabilizers, 50 % glycerol, pH 8.0
- dNTP Mixture: 10 mM (2.5 mM each dNTP)
- MgCl2 Solution: 20 mM


Storage Conditions

Taq DNA Polymerase, including buffers and reagents, should be stored immediately upon receipt at –20°C. If stored in the recommended temperature, this product will be stable until the expiration date printed out on the label.

 

Unit Definition

One unit is defined as the amount of enzyme required to incorporate 10 nmol of dNTP into acid-insoluble material in 30 minutes at 72°C.

 

Experimental data

Figure 1. Taq DNA Polymerase sensitivity test

M: 1 kb DNA Ladder (Bioneer, Cat. No. D-1040,)
Lane 1: 100 ng Template DNA
Lane 2: 10 ng Template DNA
Lane 3: 1 ng Template DNA
Lane 4: 100 pg Template DNA
Lane 5: 10 pg Template DNA
Lane 6: 1 pg Template DNA
Lane 7: 100 fg Template DNA

Figure 2. Taq DNA polymerase serial dilution test

M: 1 kb DNA Ladder (Cat. No. D-1040, Bioneer)
Lane 1: 5 U of Taq DNA polymerase
Lane 2: 1 U of Taq DNA polymerase
Lane 3: 0.5 U of Taq DNA polymerase
Lane 4: 0.33 U of Taq DNA polymerase
Lane 5: 0.25 U of Taq DNA polymerase

Figure 3. Taq DNA Polymerase long Kb DNA

M : 1 kb DNA Ladder (Cat. No. D-1040, Bioneer)
Lane 1 : 5 kb PCR product
Lane 2 : 6 kb PCR product
Lane 3 : 7 kb PCR product
Lane 4 : 8 kb PCR product

 



 

 

 

 

 

 

 


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Manual
Taq DNA Polymerase


MSDS
Taq DNA Polymerase


Brochure
• Taq DNA Polymerase Brochure


Quality Assurance
Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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Pfu DNA Polymerase


Novel enzyme for high fidelity PCR with DNA proofreading

Pfu DNA polymerase is a thermostable DNA polymerase isolated from Pyrococcus furiosus Vc1. It catalyzes the DNA-dependent polymerization of nucleotides into duplex DNA in the 5’ → 3’ direction and exhibits 3’ → 5’ exonuclease (proof reading) activity. Pfu DNA polymerase is the ideal choice for a variety of techniques requiring high-fidelity DNA synthesis by PCR reaction. It can apply to cloning, gene expression, site-directed mutagenesis and etc.

Features and Benefits
 

  • High fidelity PCR: 3’ → 5’exonuclease(proofreading) activity
  • Thermostability: Retaining 94-99% of its thermostable activity after 1 hour at 95°C.
  • Terminal Transferase Activity: Devoid of terminal transferase activity and generates blunt-ended PCR products.

 

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Enzyme Properties

5' to 3' exonuclease activity: No
3' to 5' exonuclease activity: Yes
3’ – A Overhang: No
Fragment Size: < 20 kb

 

Application

Gene synthesis
PCR or Primer extension requested High fidelity
Blunt-end PCR Cloning or mutagenesis requested high fidelity

 

Reagents Supplied

10 x Reaction Buffer: MgSO4, Tris-HCl, KCl, (NH4)2SO4,Acetylated BSA pH 8.8
dNTP Mix: 2.5 mM of each dNTP(option)

 

Concentration

2.5 U/μl



Store Temperature

-20°C


Unit Definition

One unit is defined at the amount of enzyme that will incorporate 10 nmole of dNTP into acid-insoluble material in 30 minutes at 72°C.

 

Activity Test

Amplication of limiting amounts of template DNA: comparison of Lambda DNA (A), Bacterial genomic DNA (B), Human genomic DNA (C).

* Lambda DNA was amplified using 2.5 units of enzyme in 50 uL reaction volume.
* Bactierial DNA was amplified using 2.5 units of enzyme in 50 uL reaction volume.


* Human DNA was amplified using 2.5 units of enzyme in 50 uL reaction volume.


Amplification of fragments ranging from 500 bp to 5 kb from template Lambda DNA 100 pg with 2.5 units of Pfu DNA Polymerase.
 


Notice to Purchaser

FOR RESEARCH USE ONLY. NOT FOR USE IN DIAGNOSTIC PROCEDURES

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Manual

Pfu DNA Polymerase


MSDS

Pfu DNA Polymerase

Pfu DP-dilution buffer

Pfu DP-reaction buffer


Brochure

• Enzymes 2010 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

 

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ProFi Taq DNA polymerase


ProFi Taq DNA polymerase for high efficiency and amplification of long range PCR

ProFi Taq DNA polymerase, developed by Bioneer, is a unique recombinant Taq DNA polymerase that offers enhanced amplification efficiency for PCR. ProFi Taq DNA polymerase provides more efficient amplification and higher fidelity than conventional Taq DNA polymerase. This enzyme is applicable to any template DNA, and especially effective in amplifying large genomic DNA fragments up to 20 kb. ProFi Taq DNA polymerase provides accurate long-range amplification of standard and complex templates and amplification of low-copy target, and is highly suitable for all PCR applications.

Features and Benefits

  • Long PCR: ProFi Taq is especially effective in amplifying large genomic DNA fragments around 20 kb and amplifying Lambda DNA up to 30kb.
  • Flexible: ProFi Taq provides accurate long-range amplification of standard and amplification of low-copy target, and is highly suitable for all PCR applications.
  • Reproducibility: Each batch is produced under strict quality controls. Errors that commonly occur during mass production are eliminated during the individual packaging process. Bioneer’s current batch processing system allows for the production of more accurate and reproducible end-product yield.

 

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Specifications

5' to 3' exonuclease activity: Yes
3' to 5' exonuclease activity: No
3’ – A Overhang: Yes
PCR product size: ~ 30 kb

 

Application

- Primer extension
- long-range amplification from genomic DNA
- High amplification efficiency
- Excellent performance on difficult templates
- Amplification of low-copy targets
- High yield and high sensitivity PCR

 

Experimental data


Figure 1. Comparison of PCR amplification efficiency between ProFi Taq DNA polymerase from Bioneer and other suppliers' DNA polymerase.
The cycling conditions for ProFi Taq DNA polymerase were 95°C for 5min, 30 cycles of 95°C for 20 sec, 55°C for 20 sec and 72°C for 30sec. PCR reaction using other suppliers' DNA polymerase were performed according to each supplier's protocol.

Target: human Insulin receptor gene.
Lane M: 100 bp DNA Ladder(Bioneer, Cat. No. D-1030)
Lane 1: 10 ng of human genomic DNA
Lane 2: 1 ng of human genomic DNA
Lane 3: 100 pg of human genomic DNA
Lane 4: 10 pg of human genomic DNA



Figure 2. Comparison of PCR amplification efficiency between ProFi Taq DNA polymerase from Bioneer and other suppliers' DNA polymerase
cDNA synthesized from 10-fold serial-diluted human total RNA from 10 ng to 10 pg using AccuPower® RocketScript™ Cycle RT PreMix. (Bioneer, Cat. No K-2201) wase used as a template for PCR amplification. The cycling conditions for ProFi Taq DNA polymerase were 95°C for 5min, 33 cycles of 95°C for 20 sec, 55°C for 20 sec and 72°C for 30 sec. PCR reactions using other suppliers' DNA polymerase were performed according to each supplier's protocol.

Target: human GAPDH gene.
Lane M: 100 bp DNA Ladder(Bioneer, Cat. No. D-1030)
Lane 1: 10 ng of human total cDNA
Lane 2: 1 ng of human total cDNA
Lane 3: 100 pg of human total cDNA
Lane 4: 10 pg of human total cDNA



Figure 3. Comparison of PCR amplification of long targets between ProFi Taq DNA polymerase from Bioneer and other suppliers' DNA polymerase

The cycling conditions for ProFi Taq DNA polymerase were 95°C for 5 min, 30 cycles of 95°C for 20 sec, 65°C for 20 sec and 68°C for 4 min. PCR reactions using other suppliers' DNA polymerase were performed according to each supplier's protocol.

Lane M1: Lambda/Hind III marker (Bioneer, Cat. No. D-1050)
Lane M2: 1 kb DNA Ladder (Bioneer, Cat. No. D-1040)
Lane 1: 2 kb fragment (human tumor protein p53 gene)
Lane 2: 3 kb fragment (human tumor protein p53 gene)
Lane 3: 4.5kb fragment (human DNA cross-link repair 1A gene)
Lane 4: 8 kb fragment (human hemoglobin epsilon 1 gene)



Figure 4. Comparison of PCR amplification of long targets between ProFi Taq DNA polymerase from Bioneer and other suppliers' DNA polymerase

The cycling conditions for ProFi Taq DNA polymerase were 95°C for 5 min, 32 cycles of 95°C for 20 sec and 68°C for 15 min. PCR reactions using other suppliers' DNA polymerase were performed according to each supplier's protocol.
Human genomic DNA was used as a template for PCR amplification.

Lane M1: Lambda/Hind III marker (Bioneer, Cat. No. D-1050)
Lane M2: 1 kb DNA Ladder (Bioneer, Cat. No. D-1040)
Lane 1: 11 kb fragment
Lane 2: 13.5 kb fragment
Lane 3: 17.6 kb fragment
Lane 4: 21.4 kb fragment



Figure 5. Comparison of PCR amplification of long targets between ProFi Taq DNA polymerase from Bioneer and other suppliers' DNA polymerase

The cycling conditions for ProFi Taq DNA polymerase were 95°C for 5 min, 32 cycles of 95°C for 20 sec, 65°C for40 sec, and 68°C for 20 min. PCR reactions using other suppliers' DNA polymerase were performed according to each supplier's protocol. Lambda DNA was used as a template for PCR amplification.

Lane M1: Lambda/Hind III marker (Bioneer, Cat. No. D-1050)
Lane M2: 1 kb DNA Ladder (Bioneer, Cat. No. D-1040)
Lane 1: 15 kb fragment
Lane 2: 20 kb fragment
Lane 3: 25 kb fragment
Lane 4: 30 kb fragment

 


 


 

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Manual

ProFi Taq polymerase


MSDS

ProFi Taq polymerase


Brochure

• ProFi Taq polymerase Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

 

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Hotstart Taq DNA Polymerase


An Antibody-based HotStart Taq DNA Polymerase for increased specificity and robust sensitivity




HotStart Taq DNA Polymerase is designed to increase specificity and sensitivity in PCR. The HotStart Taq DNA polymerase is inhibited at temperatures lower than 70°C, but is fully activated after the first denaturation step. This prevents the formation of mis-primed products and primer-dimers during the reaction setup process, resulting in improved PCR specificity.

Features and Benefits

  • Maximized specificity: Virtually eliminates non-specific amplification. Ideal for multiplex PCR with 2-6 amplicons.
  • Improved sensitivity: Ecellent for PCR using low copy number targets
  • TA cloning compatible: PCR products amplified with Hotstart Taq DNA polymerase have 3' A overhang and can be used for TA cloning.
  • Versatility: HotStart Taq DNA Polymerase is ideal for a wide range of PCR applications.

 

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Enzyme Properties

Concentration: 5 U/ul
5' to 3' exonuclease activity: Yes
3' to 5' exonuclease activity: No
3' – A Overhang: Yes
Nuclease contamination: Certified DNase and RNase free
Extension rate: 3–10 kb/minute depending on template complexity
Fragment Size: Up to 10 kb

 

Application

- Multiplex PCR - Hotstart PCR - Routine PCR - SYBR-Green-based qPCR - Dual-labeled probe based qPCR - Real-Time quantification of DNA and cDNA targets using SYBR Green dye - Primer extension - TA cloning - Gene sequencing - SNP

 

Kit Contents

Cat. No. HotStart Taq DNA Polymerase 10 x Rxn Buffer with MgCl2 Dilution Buffer dNTP Mixture
E-2017 250 units 0.5 ml 0.5 ml 0.5 ml
E-2017-1 1,000 units 4 x 0.5 ml 4 x 0.5 ml 4 x 0.5 ml
E-2017-2 500 units 2 x 0.5 ml 2 x 0.5 ml 2 x 0.5 ml
E-2017-3 250 units 0.5 ml 0.5 ml -
E-2017-4 1,000 units 4 x 0.5 ml 4 x 0.5 ml -

- 10 x Reaction Buffer: Tris-HCl, KCl, 15 mM MgCl2, pH 9.0
- Dilution Buffer: 20 mM Tris-HCl, 0.5 mM EDTA, 1 mM DTT, 100 mM KCl, Stabilizers, 50 % Glycerol, pH 8.0
- dNTPs mixture: 10 mM, each dNTP 2.5 mM

 

Storage Conditions

HotStart Taq DNA Polymerase, including buffers and reagents, should be stored immediately upon receipt at –20°C.
If stored in the recommended temperature, this product will be stable until the expiration date printed out on the label.

 

Unit Definition

One unit is defined as the amount of enzyme required to incorporate 10 nmol of dNTP into acid-insoluble material in 30 minutes at 72°C.

 

Experimental data

Figure 1. Singleplex and multiplex PCR were carried out to amplify fragments of different sizes from human genomic DNA p53 gene.

Lane M: 100 bp DNA Ladder of Bioneer ( Cat.No D-1030)
Lane 1: 139bp fragment Lane 5: 1,082bp fragment
Lane 2: 211bp fragment Lane 6: 1,296bp fragment
Lane 3: 447bp fragment Lane 7: 1,561bp fragment
Lane 4: 618bp fragment Lane 8: Multiplex PCR of 139, 447, and 618 bp fragments


Figure 2. Performance comparison between Bioneer HotStart Taq DNA polymerase and competitors' HotStart DNA polymerase.

Lane M: 100 bp DNA Ladder of Bioneer ( Cat.No D-1030)
Lane 1: 139bp fragment Lane 5: 1,082bp fragment
Lane 2: 211bp fragment Lane 6: 1,296bp fragment
Lane 3: 447bp fragment Lane 7: 1,561bp fragment
Lane 4: 618bp fragment Lane 8: Multiplex PCR of 139, 447, and 618 bp fragments

Bioneer: Bioneer HotStart Taq DNA polymerase
A: Competitor A's HotStart DNA polymerase
B: Competitor B's HotStart DNA polymerase

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Manual

Hotstart Taq DNA Polymerase


MSDS

Hotstart Taq DNA Polymerase


Brochure

• Hotstart Taq DNA Polymerase Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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CycleScript Reverse Transcriptase


For cDNA Synthesis and cDNA amplification

Get more cDNA in less time with CycleScript Reverse Transcriptase. CycleScript is a versatile reverse transcriptase - applicable to both conventional Reverse Transcription and Cyclic Reverse Transcription (Cyclic RT, patent pending – for cDNA amplification). It features high activity across a wide range of temperatures from 37 to 55°C therefore, reverse transcription is carried out like PCR. The Cyclic RT reaction is composed of the following steps: 1st incubation at 15~40°C for primer annealing, heating up to 42~48°C for extension, and finally incubation at 50~55°C for denaturation of the secondary structure of the RNA (optional). Bioneer's novel Cyclic RT system offers homogeneous cDNA synthesis, with a high yield of cDNA up to 9 kb.

Features and Benefits

  • Broad range of working temperatures: For G:C rich RNAs or RNAs with significant secondary structure
  • Sensitive: Even the rarest transcript can be reliably made into cDNA
  • High yield of cDNA: For genes up to 9 kb within 10 minutes
  • RNase, DNase, and Proteinase-free: Ensures the integrity of your samples
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Enzyme Properties

5' to 3' exonuclease activity: No
3' to 5' exonuclease activity: No
3’ – A Overhang: Yes
Strand Displacement: Yes
Fragment Size: Up to 9 kb

 

Application

First-strand synthesis of cDNA from RNA molecules
RT-PCR
Random priming reaction
Library construction
Probe labeling
mRNA 5’ end mapping by primer extension analysis

 

Reagents Supplied

5 x Reaction Buffer: 50 mM Tris-HCl, 250 mM KCl, 10 mM MgCl2, pH 8.1
100 mM DTT
dNTP Mix: 2.5 mM of each dNTP

 

Concentration

200 U/μl

 

Storage Conditions

50% glycerol containing 20 mM Tris-Cl (pH7.6), 150 mM NaCl, 0.1 mM EDTA, 1 mM DTT, 0.1 % IGEPAL CA-630

 

Store Temperature

-20°C

 

Unit Definition

One unit is defined as the amount of enzyme required to incorporates 1 nmole of dTTP into acid-precipitable material in 10 minutes at 37°C using poly (A)ooligo (dT) as template primer.


Figure 1. Comparison of transferrin receptor gene amplification with different reverse transcriptases.
700 ng of total RNA was used for reverse transcription and the same amount of amplified products were used for electrophoresis.

Lane MW: 100 bp Plus DNA Ladder (D-1035)
Lane 1 - 4: TFR (Transferrin receptor gene) amplified with MMLV
Lane 5 - 8: TFR amplified with CycleScript
Lane 9 - 12: TFR amplified with CycleScript
Lane 13 - 16: TFR amplified with MMLV from Company IA
Lane 17 - 20: TFR amplified with S-script from Company S
Lane 21 - 24: TFR amplified with S-script ll from Company I
Lane 25 - 28: TFR amplified with S-script lll from Company I
Lane 29 - 32: TFR amplified with O-script from Company Q



Figure 2. Comparison of β-actin gene amplification with different reverse transcriptases.
Each 10 ng, 1 ng, 100 pg, and 10 pg of total RNA was used for reverse transcription and the same amount of amplified products were used for electrophoresis.

Lane 1 - 4: &beta-actin amplified with CycleScript
Lane 5 - 8: &beta-actin amplified with CycleScript
Lane 9 - 12: &beta-actin amplified with CycleScript
Lane 13 - 16: &beta-actin amplified with MMLV from Company I
Lane 17 - 20: &beta-actin amplified with S-script from Company S
Lane 21 - 24: &beta-actin amplified with S-script from Company S
Lane 25 - 28: &beta-actin amplified with S-script from Company I
Lane 29 - 32: &beta-actin amplified with S-script from Company I



Figure 3. Comparison of GAPDH gene amplification with different reverse transcriptases.
Each 10 ng, 1 ng, 100 pg, and 10 pg of total RNA was used for reverse transcription and the same amount of amplified products were used for electrophoresis.

Lane 1 - 4: GAPDH amplified with CycleScript
Lane 5 - 8: GAPDH amplified with CycleScript
Lane 9 - 12: GAPDH amplified with CycleScript
Lane 13 - 16: GAPDH amplified with MMLV from Company I
Lane 17 - 20: GAPDH amplified with S-script from Company S
Lane 21 - 24: GAPDH amplified with S-script from Company S
Lane 25 - 28: GAPDH amplified with S-script from Company I
Lane 29 - 32: GAPDH amplified with S-script from Company I



Figure 4. Working temperature comparison of different reverse transcriptases.
Each 10 ng, 1 ng, 100 pg, and 10 pg of total RNA was used for reverse transcription and the same amount of amplified products were used for electrophoresis.

Lane 1 - 4: GAPDH amplified with CycleScript
Lane 5 - 8: GAPDH amplified with CycleScript
Lane 9 - 12: GAPDH amplified with CycleScript
Lane 13 - 16: GAPDH amplified with S-script from company S
Lane 17 - 20: GAPDH amplified with S-script from company S
Lane 21 - 24: GAPDH amplified with S-script from company S

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Manual

CycleScript Reverse Transcriptase


MSDS

Cyclescript Rtase

Cyclescript Rtase-dilution buffer

Cyclescript Rtase-reaction buffer


Brochure

Enzymes 2010 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate


 

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RocketScript™ Reverse Transcriptase


RocketScript™ Reverse Transcriptase for full length cDNA synthesis from Bioneer

RocketScript is Bioneer’s exclusive M-MLV based thermostable reverse transcriptase (RTase). Native M-MLV RTase has maximum activity at relatively low temperatures (42°C), causing several problems in reverse transcription of RNA molecules with complex secondary structure.RocketScript has thermostable activity (42°C –70°C), allowing efficient cDNA synthesis from complex secondary structure RNA. Melt the stems and loops keeping you away from your results.     

Features and Benefits

  • Thermostable Activity: Native M-MLV reverse transcriptase has low thermostable activity, therefore restricting reverse transcription reactions to relatively low temperatures (42°C). This attribute prevents RNA molecules containing many stems and loops (complex secondary structures) from being efficiently transcribed. To resolve this shortcoming, Bioneer has utilized synthetic biotechnology to develop a RTase that is active even at high temperatures of 60°C and above. By removing the traditional reaction temperature limit of 42°C, you are now able to choose your reaction temperature from 42°C –70°C and optimize your cDNA synthesis experiments.
  • Enhanced Performance: While engineering the enzyme, the researchers at Bioneer have gone ahead and engineered robust performance into RocketScript. You can now confidently perform experiments with target lengths long and short, or input RNA concentrations low and high knowing that if the RNA is in the sample, it will be accurately represented in the cDNA.
  • Ease-of-use: All components necessary for cDNA synthesis including thermostable RTase and RNase inhibitor are included in the product for ease-of-use. All you need is source RNA and primers, and preparation for your reverse transcription reaction is complete.
  • Reproducibility: Each batch is produced under strict quality controls. Errors that commonly occur during mass production are eliminated during the individual packaging process. Bioneer’s current batch processing system allows for the production of more accurate and reproducible end-product yield.

 


          ]]>
Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: No
3’ – A Overhang: No
Fragment Size: Up to 10 kb


Application

Gene synthesis
- First-strand synthesis of cDNA from RNA molecules (Reverse Transcription)
- RT-PCR
- Random priming reactions
- Library construction
- Probe labeling
- mRNA 5’-end mapping by primer extension analysis
- Real time PCR

 

Experimental data


Figure 1. Increasing reverse transcription reaction temperature increases yield of long targets.

TFRC (full-length: 5.2 kb) was reverse transcribed with A: Normal M-MLV; and B: RocketScript at 1) 100 ng and 2) 10 ng total RNA concentrations complex RNA amplification


Figure 2. RocketScript retains full activity up to 70 °C.

A low copy transcript (Myc: 495 bp) was reverse transcribed at the indicated temperatures. Thermostability of RocketScript Reverse Transcriptase is outstanding compared to a leading competitor’s reverse transcriptase. Lanes 1-4 are 100 ng, 10 ng, 1 ng and 0.1 ng of total RNA from HeLa cells, respectively


Figure 3. Comparison of amplification quality between RocketScript RTase and competitor RTases Sensitivity test. Target gene expression Level.

Lane M: 1 kb DNA Ladder
Lane 1: 100 ng Human total RNA from HeLa cell
Lane 2: 10 ng Human total RNA from HeLa cell
Lane 3: 1 ng Human total RNA from HeLa cell
Lane 4: 100 pg Human total RNA from HeLa cell

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Manual

RocketScript Reverse Transcriptase


MSDS

RocketScript Rtase

RocketScript Rtase-dilution buffer

RocketScript RTase-reaction buffer

100mM DTT


Brochure

• RocketScript Reverse Transcriptase - 2011 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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T4 DNA Ligase


for ligation of DNA, TA cloning, and other recombinant DNA applications

T4 DNA Ligase catalyzes the formation of a phosphodiester bond between 5' phosphate and 3' hydroxyl termini in duplex DNA or RNA. This enzyme will ligate DNA from blunt-end and cohesive-end termini (Including sticky ends for TA Cloning) as well as repair single stranded nicks in duplex DNA, RNA, or DNA/RNA hybrids. T4 DNA Ligase is isolated from a recombinant E.coli strain.

Features and Benefits

  • High Speed: DNA ligations in  minutes for cohesive end and in 10 minutes for blunt end DNA at 25°C
  • Flexibility: Suitable for all common DNA ligations
  • Reproducibility: Batch manufacturing under strict ISO 9001 quality control system
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Enzyme Properties

Heat Inactivation: 70°C for 10 minutes

 

Application

Blunt or cohesive-end ligation
Repair of nicks in double-stranded nucleic acids

 

Reagents Supplied

10 x Reaction Buffer: 500 mM Tris-HCI (pH 7.8), 100 mM MgCl2, 50 mM DTT, 10 mM ATP, 25 μg/ml BSA

 

Concentration

200 U/μl

 

Storage Conditions

50% glycerol containing 10 mM Tris-HCI (pH 7.5), 50 mM KCI, 1 mM EDTA, 10 mM 2-Mercaptoethanol

 

Store Temperature

-20°C

 

Unit Definition

0.01 Weiss unit of enzyme is defined as the amount of enzyme required to give 90% ligation of Hind III fragments of lambda DNA in 30 minutes, at 16°C in 20 μl of the assay mixture.



Lane 1: DNA fragment (digested with EcoR V)
Lane 2, 3, 4, 5: T4 DNA Ligase 1 U, 16°C, 10, 20, 30 and 60 minutes
Lane 6, 7, 8, 9: T4 DNA Ligase 1 U, 25°C, 10, 20, 30 and 60 minutes
Lane 10, 11, 12,13: T4 DNA Ligase 1 U, 37°C, 10, 20, 30 and 60 minutes
Lane 14: Lambda DNA (digested with Hind III)
Lane 15, 16, 17: T4 DNA Ligase 1 U, 16°C, 10, 20 and 30 minutes
Lane 18, 19, 20: T4 DNA Ligase 1 U, 25°C, 10, 20 and 30 minutes
Lane 21, 22, 23: T4 DNA Ligase 1 U, 37°C, 10, 20 and 30 minutes

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Manual

T4 DNA Ligase


MSDS

T4 DNA Ligase

T4 DNA Ligase-dilution buffer

T4 DNA Ligase-reaction buffer


Brochure

Enzymes 2010 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate


 

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Thermostable Thermus Filiformis (Tfi) DNA Ligase


Thermostable Thermus Filiformis (Tfi) DNA Ligase

Tfi DNA Ligase plays role of formatting phosphodiester bond by connecting double stranded DNA or connecting oligonucleotides 3’-hydroxyl end and 5’-phosphate end together.
Especially the reaction temperatures are between 45°C and 65°C compared to different DNA Ligase such as T4 DNA Ligase, E.coli DNA Ligase, etc.
It is the higher temperature that keeps safe and active. In addition, Tfi DNA Ligase is possible to use in ligation reaction in high reaction temperature requirement.]]>
Application

- Ligase Chain Reaction (LCR)
- Oligonucleotide Ligation Assay (OLA)
- Mutagenesis by Incorporation of a phosphorylated oligo during PCR Amplification
- Simultaneous Mutagenesis of Multiple Sites

 

Supplied with Enzyme

- 10 x Reaction Buffer (1 ml): 300 mM Tris-HCl (pH8.3), 250 mM KCl, 50 mM MgCl2, 5 mM NAD
- 1 x Dilution Buffer (1 ml): 10 mM Tris-HCl (pH7.6), 0.1 mM EDTA, 50 mM KCl, 1 mM DTT, 200 ug/mL acetylated BSA,
50% Glycerol

 

Storage Condition

20 mM Tris-HCl (pH7.6), 2 mM MgCl2, 1 mM EDTA, 1 mM DTT, 0.5% Tween -20, 0.5% IGEPAL CA-630, 50% Glycerol, store at -20°C.

 

Concentration

20 units/μl

 

Unit definition

One unit of Tfi DNA Ligase is defined as the amount of enzyme required to give 50% ligation of the 12 base pair cohesive ends of 1 ug of PspEI digested lambda DNA in 10min at 45°C.

 

Activity Assay Conditions

The activity assay is carried out in a 20 μl reaction containing 1 ug of PspEI digested lambda DNA and 1 x Tfi DNA ligase reaction buffer. After incubation at 45°C for 10 min., the reaction is terminated by addition of stop solution (40%(w/v) sucrose, 50 mM EDTA and 0.25% bromophenol blue). Then heat at 70°C for 10 min and immediately load on a 0.8% agarose gel.

 

Stability

The half-life of the enzyme in 1 x reaction buffer is more than 1 hour at 95°C and 55 hours at 65°C.

 

Note

Tfi DNA Ligase should not be used as a substitute for other DNA ligase, i.e., T4 DNA Ligase.

 

References

1. Barany, F. (1991) Proc. Natl. Acad. Sci. USA, 88, 189 - 193.
2. Landegren, U. et al.(1988) Science 241, 1077 - 1080
3. Michael, Scott F. (1994) Biotechniques 16:3, 410 - 412.
4.Gerard J. A. et al. (1993) Biotechniques 15:1, 172 - 178.

 

Experimental Data

Fig 1. Ligation test at various temperatures (45°C~ 65°C)

Incubate the reaction containing ligase 1 unit and 1 ug DNA[lambda PspEI] at each temperature for 10 min.
Lane 1: λ DNA/PspE I (control) Lane 2: Incubate at 45°C, 10 min
Lane 3: Incubate at 50°C, 10 min Lane 4: Incubate at 55°C, 10 min
Lane 5: Incubate at 60°C, 10 min Lane 6: Incubate at 65°C, 10 min
 

Fig 2. Heat Stability test at 95°C

Incubate the enzyme at 95°C each time. And then add 1 unit ligase to a 20 ul reaction containing 1ug DNA[lambda PspEI] and incubate the mixture at 45°C for 10 min.
Lane 1: λ DNA/PspE I (control) Lane 2: Incubate at 95°C, 10 min
Lane 3: Incubate at 95°C, 20 min Lane 4: Incubate at 95°C, 30 min
Lane 5: Incubate at 95°C, 40 min Lane 6: Incubate at 95°C, 50 min
Lane 7: Incubate at 95°C, 60 min Lane 8: Incubate at 95°C, 70 min
Lane 9: Incubate at 95°C, 80 min Lane 9: Incubate at 95°C, 90 min
 

Fig 3. Heat Stability test at 65°C

Incubate the enzyme for each time at 65°C and then add 1 unit ligase to a 20 ul reaction containing 1 ug DNA[lambda PspEI] and incubate the mixture at 4°C for 10 min.
Lane 1: λ DNA/PspE I (control) Lane 2: Incubate at 65°C, 6 hrs
Lane 3: Incubate at 65°C, 12 hrs Lane 4: Incubate at 65°C, 18 hrs
Lane 5: Incubate at 65°C, 24 hrs Lane 6: Incubate at 65°C, 30 hrs
Lane 7: Incubate at 65°C, 36 hrs Lane 8: Incubate at 65°C, 42 hrs
Lane 9: Incubate at 65°C, 48 hrs Lane 10: Incubate at 65°C, 54 hrs
Lane 11: Incubate at 65°C, 60 hrs Lane 12: Incubate at 65°C, 66 hrs
Lane 13: Incubate at 65°C, 72 hrs Lane 14:Incubate at 65°C, 78 hrs

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Manual

Tfi DNA Ligase


MSDS

Tfi DNA Ligase

Tfi DL-reaction buffer


Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate


 

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T7 RNA Polymerase


T7 RNA Polymerase is isolated from E.coli cells containing the ligase gene cloned from T7 bacteriophage.

T7 RNA Polymerase is a DNA dependent RNA polymerase with a highly specificity for the initiation of transcription at T7 RNA polymerase promoters. It is widely used for the rapid synthesis in vitro of specific RNAs.

 

Features and Benefits

  • Source: T7 RNA Polymerase is isolated from E.coli cells containing the ligase gene cloned from T7 bacteriophage.


 


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Applications

- Synthesis of RNA transcripts for northern hybridization and southern hybridization probes.
- RNA generation for studies of RNA structure, procession and catalysis

 

Supplied with Enzyme

- 10 x Reaction Buffer (1 ml): 400 mM Tris-HCl (pH 8.0), 60 mM MgCl2, 20 mM Spermidine
- 100 mM DTT (0.5 ml)
- DEPC-DW (1ml)

 

Storage Condition

200 mM Na-phosphate (pH 7.7), 10 mM NaCl, 1 mM EDTA, 1 mM DTT, 0.02 % Triton x -100, 0.08% Tween-20, 50% Glycerol, Store at -20°C

 

Concentration

20.1 units/㎕

 

Unit Definition

One unit of enzyme catalyzed incorporation of 1 nmole of [3H]ATPs into acid insoluble form in 60 min at 37°C

 

Quality Assurance

Nuclease Contamination Assay No altered was detected after incubation of 1 ug of substrate DNA with 500 units of T7 RNA polymerase for 18 hrs in 37°C
Protease Contamination Assay No altered pattern was detected after in cubation of 2,000 units of T7 RNA polymerase for 18 hrs in 37°C
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Manual

T7 RNA Polymerase


MSDS

T7 RNA Polymerase

T7 RNA Polymerase-reaction buffer

DEPC DW


Brochure

Enzymes 2010 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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Automatic Nucleic Acid Extraction Kits for ExiProgen™


Single Spin Column type Nucleic Acid Extraction Kits


96 well Vacuum manifold type Nucleic Acid Extraction Kits


Solution type Nucleic Acid Extraction Kits


Nucleic Acid Extraction Tools


Genomic DNA Extraction Kits


Total RNA Extraction Kits


Viral DNA/RNA Extraction Kits


ExiProgen™ Tissue Genomic DNA Kit


For various animal tissue samples, Automatic Genomic DNA Extraction Kit – ExiProgen™ Tissue Genomic DNA Extraction Kit



ExiProgen™ Tissue Genomic DNA Kit
ExiProgen™ Tissue Genomic DNA Kit uses our unique Tissue lysis buffer with Proteinase K to efficiently dissociate tissues and proteins for efficient extraction of genomic DNA. The binding buffer and silica magnetic particles will bind genomic DNA to the surface of the beads. The wells are then subject to a magnetic field, forcing the genomic DNA-bound silica magnetic particles to remain within the container while the reaction mixture and cellular waste are removed. Three types of washing buffers are introduced sequentially during in the next step to remove the remainder of cellular waste products. The washing buffers are then pipetted off, while the genomic DNA-bound silica magnetic particles remain bound by the magnetic field. DNase-free elution buffer is then introduced to the silica magnetic particles to release the bound and now purified genomic DNA.

Features and Benefits

  • Reproducibility & Reliability

ExiProgen™ Tissue Genomic DNA Kit functions through a buffer cartridge system containing buffers optimized for the extraction of genomic DNA from various animal tissue samples. Nucleic acid extractions occur with the buffer cartridges through the automated nucleic acid extraction instrument, allowing for reproducible performance. Also, by preventing human errors during the workflow, the results are always dependable. The product is produced under ISO 9001 quality standards by an automated production facility to provide you with high-quality performance.

  • High-Yield and Purity

The buffer composition within the ExiProgen™ Tissue Genomic DNA Kit was developed to extract high purity and high yield genomic DNA from various animal tissue samples. Also, the extraction protocols contained within the automated nucleic acid extraction instruments ExiProgen™ is optimized for maximum performance. Anybody can extract genomic DNA of high purity and yield from animal tissue samples by using the pre-programmed and optimized protocols in ExiProgen™.

 

Contents

Components Quantity Note
Buffer Cartridge ① 6 ea  
Buffer Cartridge ② 6 ea  
Tissue lysis buffer 1 ea 25 ml
Disposable filter tip 3 pack 32 ea/pack
Elution tube 1 pack 12 ea/pack
Manual 1 ea  
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Specifications

Starting culture volume up to 25 mg
Elution volume 50 - 100 ul
Expected Yield 5 - 20 ug
Expected Purity (A260/280) > 1.8

 

Applications

PCR, Quantitative real time PCR, Gene cloning, SNP analysis, Genetics

 

Procedure


Experimental Data


Fig. 1 Agarose gel electrophoresis results of genomic DNA extracted from mouse tissue

Results of gel electrophoresis of genomic DNA extracted from 25mg mouse lung tissue. Yields were on average 15-20ug and purities (A260/A280) were at least (average) 1.8. Also, to observe cross-contamination that may occur during the extraction process, the mouse tissue samples were placed in a checkerboard pattern, and the rest of the wells were filled with D.W. No cross-contamination could be detected. M; Size marker, S; Extraction with mouse tissue sample, B; Extraction with D.W only.


Fig. 2 Agarose gel electrophoresis results of genomic DNA extracted from mouse tail tip

Results of gel electrophoresis of genomic DNA extracted from mouse tail tip. Yields were on average up to 15ug and purities (A260/A280) were at least (average) 1.8. Also, to observe cross-contamination that may occur during the extraction process, the mouse tail tip samples were placed in a checkerboard pattern, and the rest of the wells were filled with D.W. No cross-contamination could be detected. M; Size marker, S; Extraction with mouse tail tip sample, B; Extraction with D.W only.

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Application Note

• ExiProgen™ Tissue Genomic DNA Kit_Mouse_lung

• ExiProgen™ Tissue Genomic DNA Kit_Mouse_tail tip


Manual

• ExiProgen™ Tissue Genomic DNA Kit


MSDS

• ExiProgen™ Tissue Genomic DNA Kit


Brochure

• ExiProgen™ Tissue Genomic DNA Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

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ExiProgen™ Bacteria Genomic DNA Kit


For various cultured bacterial cells, Automatic Genomic DNA Extraction Kit – ExiProgen™ Bacteria Genomic DNA Extraction Kit



ExiProgen™ Bacteria Genomic DNA Kit
ExiProgen™ Bacteria Genomic DNA utilizes a resuspension buffer that efficiently disrupts cells and proteins for efficient extraction of genomic DNA. Gram (+) bacteria needs specific pre-treatment before the re-suspension step using Lyticase or Lysozyme (not included). The binding buffer and silica magnetic particles will bind genomic DNA to the surface of the beads. The reaction containers are then subject to a magnetic field, forcing the genomic DNA-bound silica magnetic particles to remain within the wells while the reaction mixture and cellular waste are removed. Three types of washing buffers are introduced sequentially during in the next step to remove the remainder of cellular waste products. The washing buffers are then pipetted off, while the genomic DNA-bound silica magnetic particles remain bound by the magnetic field. DNase-free elution buffer is then introduced to the silica magnetic particles to release the bound and now purified genomic DNA.

Features and Benefits

  • Reproducibility & Reliability
ExiProgen™ Bacteria Genomic DNA Kit functions through a buffer cartridge system containing buffers optimized for the extraction of genomic DNA from Gram (-) Bacteria and Gram (+) Bacteria samples. Nucleic acid extractions occur with the buffer cartridges through the automated nucleic acid extraction instrument, allowing for reproducible performance. Also, by preventing human errors during the workflow, the results are always dependable. The product is produced under ISO 9001 quality standards by an automated production facility to provide you with high-quality performance.
  • High-Yield and Purity
The buffer composition within the ExiProgen™ Bacteria Genomic DNA Kit was developed to extract high purity and high yield genomic DNA from Gram (-) Bacteria and Gram (+) Bacteria samples. Also, the extraction protocols contained within the automated nucleic acid extraction instruments ExiProgen™ is optimized for maximum performance. Anyony can extract genomic DNA of high purity and yield from Gram (-) Bacteria and Gram (+) Bacteria samples by using the pre-programmed and optimized protocols in ExiProgen™.

Contents

Components Quantity Note
Buffer Cartridge ① 6 ea  
Buffer Cartridge ② 6 ea  
Resuspension buffer 1 ea 25 ml
Disposable filter tip 3 pack 32 ea/pack
Elution tube 1 pack 12 ea/pack
Manual 1 ea  

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Specifications

Starting culture volume up to 1X109 cells
Elution volume 50 - 100 ul
Expected Yield up to 10 ug
Expected Purity (A260/280) > 1.8

 

Applications

PCR, Quantitative real time PCR, Gene cloning, Genetics, Classification of bacteria

 

Procedure




Experimental Data


Fig. 1 Agarose gel electrophoresis results of genomic DNA extracted from E.coli cell(1X109 cells)

Results of gel electrophoresis of genomic DNA extracted from E.coli cell(1X109 cells). Yields were on average 8-12ug and purities (A260/A280) were at least (average) 1.8. Also, to observe cross-contamination that may occur during the extraction process, the E.coli cell(1X109 cells) were placed in a checkerboard pattern, and the rest of the wells were filled with D.W. No cross-contamination could be detected. M; Size marker, S; Extraction with E.coli cell(1X109 cells) sample, B; Extraction with D.W only.


Fig. 2 Real-time PCR results(MTB & NTM) of genomic DNA extracted from sputum samples
Real-time PCR results using an AccuPower® MTB & NTM EX Real-Time PCR Kit(MTN-1111, Bioneer) and run on Exicycler™ 96 Real-Time Quantitative Thermal Block (A-2060, Bioneer) from genomic DNA extracted from 10ml of sputum samples.

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Application Note

• ExiProgen™ Bacteria Genomic DNA Kit_E.coli cell

• ExiProgen™ Bacteria Genomic DNA Kit_M.tuberculosis


Manual

• ExiProgen™ Bacteria Genomic DNA Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

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ExiProgen™ Beef Genomic DNA Kit


For bovine tissue samples, Automatic Genomic DNA Extraction Kit – ExiProgen™ Beef Genomic DNA Extraction Kit



ExiProgen™ Beef Genomic DNA Kit
ExiProgen™ Beef Genomic DNA Kit uses our unique Tissue lysis buffer with Proteinase K to efficiently dissociate tissues and proteins for efficient extraction of genomic DNA. The binding buffer and silica magnetic particles will bind genomic DNA to the surface of the beads. The wells are then subject to a magnetic field, forcing the genomic DNA-bound silica magnetic particles to remain within the container while the reaction mixture and cellular waste are removed. Three types of washing buffers are introduced sequentially during in the next step to remove the remainder of cellular waste products. The washing buffers are then pipetted off, while the genomic DNA-bound silica magnetic particles remain bound by the magnetic field. DNase-free elution buffer is then introduced to the silica magnetic particles to release the bound and now purified genomic DNA.

Features and Benefits

  • Reproducibility & Reliability

ExiProgen™ Beef Genomic DNA Kit functions through a buffer cartridge system containing buffers optimized for the extraction of genomic DNA from bovine tissue samples. Nucleic acid extractions occur with the buffer cartridges through the automated nucleic acid extraction instrument, allowing for reproducible performance. Also, by preventing human errors during the workflow, the results are always dependable. The product is produced under ISO 9001 quality standards by an automated production facility to provide you with high-quality performance.

  • High-Yield and Purity

The buffer composition within the ExiProgen™ Beef Genomic DNA Kit was developed to extract high purity and high yield genomic DNA from various animal tissue samples. Also, the extraction protocols contained within the automated nucleic acid extraction instruments ExiProgen™ is optimized for maximum performance. Anybody can extract genomic DNA of high purity and yield from bovine tissue samples by using the pre-programmed and optimized protocols in ExiProgen™.


Contents

Components Quantity Note
Buffer Cartridge ① 6 ea  
Buffer Cartridge ② 6 ea  
Plant Lysis buffer ① 1 ea 25 ml
Plant Lysis buffer ② 1 ea 25 ml
Disposable filter tip 3 pack 32 ea/pack
Elution tube 1 pack 12 ea/pack
Manual 1 ea  
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Specifications

Starting culture volume 10 - 40 mg
Elution volume 50 - 100 ul
Expected Yield up to 10 ug
Expected Purity (A260/280) > 1.8

 

Applications

PCR, Quantitative real time PCR, Gene cloning, SNP analysis, Genetics

 

Procedure




Experimental Data


Fig. 1 Agarose gel electrophoresis results of genomic DNA extracted from bovine tissue

Results of gel electrophoresis of genomic DNA extracted from 40mg bovine tissue sample. Yields were on average 10ug and purities (A260/A280) were at least (average) 1.8. Also, to observe cross-contamination that may occur during the extraction process, the mouse tissue samples were placed in a checkerboard pattern, and the rest of the wells were filled with ddH2O. No cross-contamination could be detected.
M; Size marker, S; Extraction with bovine tissue sample, B; Extraction with D.W only.

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Application Note

• ExiProgen™ Beef Genomic DNA Kit_Bovine skeletal muscle


Manual

• ExiProgen™ Beef Genomic DNA Kit


MSDS

• ExiProgen™ Beef Genomic DNA Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

]]>

ExiProgen™ Rice Genomic DNA Kit


Automatic Genomic DNA Extraction Kit – ExiProgen™ Rice Genomic DNA Extraction Kit




ExiProgen™ Rice Genomic DNA Kit
ExiProgen™ Rice Genomic DNA Kit uses our unique lysis buffer with Proteinase K to efficiently lyse the rice seed for efficient extraction of genomic DNA. The binding buffer and silica magnetic particles will bind genomic DNA to the surface of the beads. The wells are then subject to a magnetic field, forcing the genomic DNA-bound silica magnetic particles to remain within the container while the reaction mixture and cellular waste are removed. Three types of washing buffers are introduced sequentially during in the next step to remove the remainder of cellular waste products. The washing buffers are then pipetted off, while the genomic DNA-bound silica magnetic particles remain bound by the magnetic field. DNase-free elution buffer is then introduced to the silica magnetic particles to release the bound and now purified genomic DNA.           

Features and Benefits

  • Reproducibility & Reliability

ExiProgen™ Rice Genomic DNA Kit functions through a buffer cartridge system containing buffers optimized for the extraction of genomic DNA from rice sample. Nucleic acid extractions occur with the buffer cartridges through the automated nucleic acid extraction instrument, allowing for reproducible performance. Also, by preventing human errors during the workflow, the results are always dependable. The product is produced under ISO 9001 quality standards by an automated production facility to provide you with high-quality performance.

  • High-Yield and Purity

The buffer composition within the ExiProgen™ Rice Genomic DNA Kit was developed to extract high purity and high yield genomic DNA from rice sample. Also, the extraction protocols contained within the automated nucleic acid extraction instruments ExiProgen™ is optimized for maximum performance. Anybody can extract genomic DNA of high purity and yield from rice sample by using the pre-programmed and optimized protocols in ExiProgen™.

 

Contents

Components Quantity Note
Buffer Cartridge ① 6 ea  
Buffer Cartridge ② 6 ea  
Rice Lysis buffer 1 ea 40 ml
Rice Binding buffer 1 ea 20 ml
Proteinase K, lyophilized 2 tube 20 mg/ tube
Disposable filter tip 3 pack 32 ea/pack
Elution tube 1 pack 12 ea/pack
Manual 1 ea  
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Specifications

Starting culture volume 10 - 20 mg
Elution volume 50 ul
Expected Yield 1-2 ug
Expected Purity (A260/280) > 1.8

 

Applications

PCR, Quantitative real time PCR, Gene cloning, SNP analysis, Genetics

 

Procedure




Experimental Data


Fig. 1 Agarose gel electrophoresis results of genomic DNA extracted from rice sample

Results of gel electrophoresis of genomic DNA extracted from rice sample. Yields were on average 1-2ug and purities (A260/A280) were at least (average) 1.8.



Fig. 2 Multiplex conventional PCR results of genomic DNA extracted from rice sample

Results of gel electrophoresis of PCR product using its specific PCR primer sets to distinguish its cultivar varieties.


 

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Application Note

• ExiProgen™ Rice Genomic DNA Kit_Rice


Manual

• ExiProgen™ Rice Genomic DNA Kit


MSDS

• ExiProgen™ RiceGenomic DNA Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

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ExiProgen™ Plant Genomic DNA Kit


For various plant leaf and seed samples, Automatic Genomic DNA Extraction Kit – ExiProgen™ Plant Genomic DNA Extraction Kit



ExiProgen™ Plant Genomic DNA Kit
ExiProgen™ Plant Genomic DNA Kit uses our unique Plant lysis buffer with Proteinase K contained to efficiently dissrupt plant tissues and proteins for efficient extraction of genomic DNA. The binding buffer and silica magnetic particles will bind genomic DNA to the surface of the beads. The wells are then subject to a magnetic field, forcing the genomic DNA-bound silica magnetic particles to remain within the container while the reaction mixture and cellular waste are removed. Three types of washing buffers are introduced sequentially during in the next step to remove the remainder of cellular waste products. The washing buffers are then pipetted off, while the genomic DNA-bound silica magnetic particles remain bound by the magnetic field. DNase-free elution buffer is then introduced to the silica magnetic particles to release the bound and now purified genomic DNA.

Features and Benefits

  • Reproducibility & Reliability

ExiProgen™ Plant Genomic DNA Kit functions through a buffer cartridge system containing buffers optimized for the extraction of genomic DNA from various plant samples. Nucleic acid extractions occur with the buffer cartridges through the automated nucleic acid extraction instrument, allowing for reproducible performance. Also, by preventing human errors during the workflow, the results are always dependable.
The product is produced under ISO 9001 quality standards by an automated production facility to provide you with high-quality performance.

  • High-Yield and Purity

The buffer composition within the ExiProgen™ Plant Genomic DNA Kit was developed to extract high purity and high yield genomic DNA from various plant samples. Also, the extraction protocols contained within the automated nucleic acid extraction instruments ExiProgen™ is optimized for maximum performance. Anybody can extract genomic DNA of high purity and yield from plant samples by using the pre-programmed and optimized protocols in ExiProgen™.

 

Contents

Components Quantity Note
Buffer Cartridge ① 6 ea  
Buffer Cartridge ② 6 ea  
Plant Lysis buffer ① 1 ea 25 ml
Plant Lysis buffer ② 1 ea 25 ml
Disposable filter tip 3 pack 32 ea/pack
Elution tube 1 pack 12 ea/pack
Manual 1 ea  
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Specifications

Starting culture volume up to 100 mg
Elution volume 50 - 100 ul
Expected Yield 3 - 5 ug
Expected Purity (A260/280) > 1.8

 

Applications

PCR, Quantitative real time PCR, Gene cloning, Genetics, GMO detection

 

Procedure




Experimental Data

Fig. 1 Agarose gel electrophoresis results of genomic DNA extracted from Plant leaf tissue
Results of gel electrophoresis of genomic DNA extracted from plant leaf tissue (spinach, 100mg). Yields were on average 3-5ug and purities (A260/A280) were at least (average) 1.8. Also, to observe cross-contamination that may occur during the extraction process, the plant leaf tissues were placed in a checkerboard pattern, and the rest of the wells were filled with D.W. No cross-contamination could be detected. M; Size marker, S; Extraction with plant leaf tissue sample, B; Extraction with D.W only.

 

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Application Note

• ExiProgen™ Plant Genomic DNA Kit_Chinese cabbage


Manual

• ExiProgen™ Plant Genomic DNA Kit


MSDS

• ExiProgen™ Plant Genomic DNA Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

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ExiProgen™ Tissue total RNA Kit


For various animal tissue samples, Automatic total RNA Extraction Kit – ExiProgen™ Tissue total RNA Kit



ExiProgen™ Tissue total RNA Kit
ExiProgen™ Tissue total RNA Kit uses Tissue lysis buffer ① and Tissue lysis buffer ② contained within the product to efficiently disrupt animal tissues and proteins for efficient extraction of total RNA without degradation. The binding buffer and silica magnetic particles will bind total RNA to the surface of the beads. The reaction containers are then subject to a magnetic field, forcing the total RNA-bound silica magnetic particles to remain within the container while the reaction mixture and cellular waste are removed. Three types of washing buffers +are introduced sequentially during in the next step to remove the remainder of cellular waste products. The washing buffers are then pipetted off, while the total RNA-bound silica magnetic particles remain bound by the magnetic field. RNase-free elution buffer is then introduced to the silica magnetic particles to release the bound and now purified total RNA.

Features and Benefits

  • Reproducibility & Reliability

ExiProgen™ Tissue Total RNA Kit functions through a buffer cartridge system containing buffers optimized for the extraction of total RNA from various animal tissue samples. Nucleic acid extractions occur with the buffer cartridges through the automated nucleic acid extraction instrument, allowing for reproducible performance. Also, by preventing human errors during the workflow, the results are always dependable.
The product is produced under ISO 9001 quality standards by an automated production facility to provide you with high-quality performance.

  • High-Yield and Purity

The buffer composition within the ExiProgen™ Tissue Total RNA Kit was developed to extract high purity and high yield total RNA from various animal tissue samples. Also, the extraction protocols contained within the automated nucleic acid extraction instruments ExiProgen™ is optimized for maximum performance. Anybody can extract total RNA of high purity and yield from tissue samples by using the pre-programmed and optimized protocols in ExiProgen™.

 

Contents

Components Quantity Note
Buffer Cartridge ① 6 ea  
Buffer Cartridge ② 6 ea  
Tissue lysis buffer ① 1 ea 50 ml
Tissue lysis buffer ② 1 ea 50 ml
Disposable filter tip 3 pack 32 ea/pack
Elution tube 1 pack 12 ea/pack
Manual 1 ea  

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Specifications

  Liver Eye-ball Brain Tail-tip
Sample Vol. 15 mg 1 ea 20 mg 15 mg
Elution Vol. 100 ul 100 ul 100 ul 100 ul
Yield (ug) 25 ug 10 ug 8.5 ug 4 ug
Purity (A260/280) > 1.9 > 1.9 > 1.9 > 1.9

 

Applications

RT-PCR, Quantitative real time RT-PCR, cDNA synthesis, Chip-array analysis

 

Procedure




Experimental Data



Fig. 1 Electrophoresis result with LabChip GX

Results of capillary electrophoresis of total RNA extracted from tissue sample(rat liver, 15mg) using LabChip GX(Caliper life science, USA). Average RQS(RNA Quality Score) were at least 9.4.



Fig. 2 Real-time RT-PCR results of total RNA extracted from animal tissue

Real-time RT-PCR results using an AccuPower® RocketScrpt™ RT PreMix(K-2101, Bioneer)와 AccuPower® Dualstar™ qPCR PreMix(K-6110, Bioneer) and run on ExicyclerTM 96 Real-Time Quantitative Thermal Block (A-2060, Bioneer) from total RNA extracted from liver sample (rat, 15mg).




 

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Application Note

• ExiProgen™ Tissue total RNA Kit_Rat liver


Manual

• ExiProgen™ Tissue total RNA Kit


MSDS

• ExiProgen™ Tissue total RNA Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

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ExiProgen™ Plant total RNA Kit


For various plant tissue & seed samples, Automatic total RNA Extraction Kit – ExiProgen™ Plant total RNA Kit



ExiProgen™ Plant total RNA Kit
ExiProgen™ Plant total RNA Kit uses Plant lysis buffer contained within the product to efficiently disrupt plant cellular wall structure and proteins for efficient extraction of total RNA without degradation. The binding buffer and silica magnetic particles will bind total RNA to the surface of the beads. The reaction containers are then subject to a magnetic field, forcing the total RNA-bound silica magnetic particles to remain within the container while the reaction mixture and cellular waste are removed. Three types of washing buffers are introduced sequentially during in the next step to remove the remainder of cellular waste products. The washing buffers are then pipetted off, while the total RNA-bound silica magnetic particles remain bound by the magnetic field. RNase-free elution buffer is then introduced to the silica magnetic particles to release the bound and now purified total RNA.

Features and Benefits

  • Reproducibility & Reliability

ExiProgen™ Plant Total RNA Kit functions through a buffer cartridge system containing buffers optimized for the extraction of total RNA from various animal tissue samples. Nucleic acid extractions occur with the buffer cartridges through the automated nucleic acid extraction instrument, allowing for reproducible performance. Also, by preventing human errors during the workflow, the results are always dependable. The product is produced under ISO 9001 quality standards by an automated production facility to provide you with high-quality performance.

  • High-Yield and Purity

The buffer composition within the ExiProgen™ Tissue Total RNA Kit was developed to extract high purity and high yield total RNA from various animal tissue samples. Also, the extraction protocols contained within the automated nucleic acid extraction instruments ExiProgen™ is optimized for maximum performance. Anybody can extract total RNA of high purity and yield from tissue samples by using the pre-programmed and optimized protocols in ExiProgen™.

 

Contents

Components Quantity Note
Buffer Cartridge ① 6 ea  
Buffer Cartridge ② 6 ea  
Plant Lysis buffer ① 1 ea 25 ml
Plant Lysis buffer ② 1 ea 25 ml
Disposable filter tip 3 pack 32 ea/pack
Elution tube 1 pack 12 ea/pack
Manual 1 ea  


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Specifications

  Leaf tissue (wet) Seed
  Chinese cabbage Broccoli Chinese cabbage Red bean
Sample Vol. 100 mg 100 mg 100 mg 100 mg
Elution Vol. 50 ul 50 ul 50 ul 50 ul
Expected yield (ug) Up to 15 ug Up to 8 ug Up to 5 ug Up to 9 ug
Purity (A260/280) > 2.0 > 2.0 > 2.0 > 2.0
Purity (A260/280) > 2.0 > 2.1 > 1.8 > 1.5

 

Applications

RT-PCR, Quantitative real time RT-PCR, cDNA synthesis, Chip-array analysis

 

Procedure




Experimental Data



Fig. 1 Electrophoresis result with extracted plant total RNA

Results of gel electrophoresis of total RNA extracted from various plant samples. Expected yields were on average 5-15ug depending on sample types. Also expected purities were at least 2.0 (A260/A280) and 1.5 (A260/A230).
 

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Application Note

• ExiProgen™ Plant total RNA Kit


Manual

• ExiProgen™ Plant total RNA Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

 

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ExiProgen™ Viral DNA/RNA Kit


For various clinical samples, Automatic viral DNA/ RNA Extraction Kit – ExiProgen™ Viral DNA/ RNA Kit



ExiProgen™ Viral DNA/ RNA Kit
ExiProgen™ Viral DNA/ RNA Kit is a product designed to extract high-purity viral DNA/ RNA from c serum, plasma, CSF, saliva, swab and cell free body fluid samples using the automated nucleic acid extraction instrument ExiProgen™ 16 Plus. The binding buffer and silica magnetic particles will bind viral DNA/ RNA to the surface of the beads. The reaction containers are then subject to a magnetic field, forcing the viral DNA/ RNA-bound silica magnetic particles to remain within the container while the reaction mixture and cellular waste are removed. Three types of washing buffers are introduced sequentially during in the next step to remove the remainder of cellular waste products. The washing buffers are then pipetted off, while the viral DNA/ RNA-bound silica magnetic particles remain bound by the magnetic field. DNase RNase-free elution buffer is then introduced to the silica magnetic particles to release the bound and now purified viral DNA/ RNA.

Features and Benefits

  • Reproducibility & Reliability

ExiProgen™ Viral DNA/ RNA Kit functions through a buffer cartridge system containing buffers optimized for the extraction of total RNA from serum, plasma, CSF, saliva, swab and cell free body fluid samples. Nucleic acid extractions occur with the buffer cartridges through the automated nucleic acid extraction instrument, allowing for reproducible performance. Also, by preventing human errors during the workflow, the results are always dependable.
The product is produced under ISO 9001 quality standards by an automated production facility to provide you with high-quality performance.

  • High-Yield and Purity

The buffer composition within the ExiProgen™ Viral DNA/ RNA Kit was developed to extract high purity and high yield total RNA from serum, plasma, CSF, saliva, swab and cell free body fluid samples. Also, the extraction protocols contained within the automated nucleic acid extraction instruments ExiProgen™ 16 Plus is optimized for maximum performance. Anyony can extract total RNA of high purity and yield from cultured cell samples by using the pre-programmed and optimized protocols in ExiProgen™ 16 Plus.

 

Contents

Components Quantity Note
Buffer Cartridge ① 6 ea  
Buffer Cartridge ② 6 ea  
Disposable filter tip 3 pack 32 ea/pack
Elution tube 1 pack 12 ea/pack
Manual 1 ea  


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Applications

PCR, RT-PCR, Quantitative real time PCR, Quantitative real time RT-PCR

 

Procedure




Experimental Data



Fig. 1 Real-time PCR result(HBV) of viral DNA extracted from serum
Real-time PCR results using an AccuPower® HBV Quantitative PCR Kit(HBV-1111, Bioneer) and run on Exicycler™ 96 Real-Time Quantitative Thermal Block (A-2060, Bioneer) with extracted viral DNA.



Fig. 2 Real-time RT-PCR result(HCV) of viral RNA extracted from serum
Real-time RT-PCR results using an AccuPower® HCV Quantitative PCR Kit(HCV-1111, Bioneer) and run on Exicycler™ 96 Real-Time Quantitative Thermal Block (A-2060, Bioneer) with extracted viral RNA.

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Application Note

• ExiProgen™ Viral DNA/RNA Kit


Manual

• ExiProgen™ Viral DNA/RNA Kit


MSDS

• ExiProgen™ Viral DNA/RNA Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

 

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AccuPrep® Genomic DNA Extraction Kit


For Whole blood, Animal tissue and Cultured cells; a Spin column based Genomic DNA Extraction Kit – AccuPrep® Genomic DNA Extraction Kit



AccuPrep® Genomic DNA Extraction Kit can rapidly and conveniently extract genomic DNA from blood, lymphocyte, buffy coat, tissue and cell cultures. This process does not require phenol/chloroform extraction, alcohol precipitation or other burdensome steps. The kit is based on spin column technology. Proteins and other contaminants which can inhibit enzyme reactions or PCR are eliminated through a series of short wash-and-spin steps. The isolated DNA is then ready to use in various applications.

Features and Benefits

Highly purified and high yield genomic DNA can be extracted from Whole blood, Animal tissue, Cultured cells.

Silica based DNA binding column with high binding efficiency.

Optimized Tissue lysis buffer for efficient lysis of the various tissue sample.

 

Contents

Components K-3032 (100 reactions)
Tissue Lysis buffer (TL) 25 ml X 1 ea
Binding buffer (GC) 25 ml X 1 ea
Wahsing buffer 1 (W1) 40 ml X 1 ea
Washing buffer 2 (W2) 20 ml X 2 ea
Elution buffer (EL) 30 ml X 1 ea
Proteinase K, lyophilized 25 mg X 2 ea
DNA binding column tube 100 ea X 1 pack
2.0ml tubes for filtration 100 ea X 1 pack
1.5ml tubes for elution 100 ea X 1 pack
Manual 1 ea

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Specifications

Sample Amount Yield
Whole blood 200 ul 3 - 6 ug
Buffy coat 200 ul 15 - 20 ug
Cultured cells 104 ~ 108 cells 15 - 20 ug
Mammalian tissue 25 ~ 50 mg 10 - 15 ug

 

Applications

Gene cloning, PCR, real time PCR, Southern blotting, SNP genotyping

 

Procedure




Experimental Data



Fig. 1 Gel electrophoresis of whole blood genomic DNA

Lane M1; Molecular weight marker, λ DNA/EcoR l + Hind lll Markers (Cat. No. D-1070, Bioneer),
Lane M2; Molecular weight marker, 1 kb ladder (Cat. No. D-1040, Bioneer),
Lane 1; whole blood genomic DNA of two individual mice,
Lane 2; whole blood genomic DNA of two individual rats,
Lane 3; whole blood genomic DNA of two persons.
* 100 ng of Intact DNA (left) and Hind III (E-1721, Bioneer) enzyme digested DNA (right)



Fig. 2 PCR with p53 primer set after genomic DNA purification

Lane M: Molecular marker, 100 bp ladder (D-1030, Bioneer), Lane 1~8: PCR product with p53 primer set
 

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Manual

AccuPrep® Genomic DNA Extraction Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

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Viral RNA Extraction Kit


Fragment DNA Purification Kits


Genomic DNA Extraction Kits


AccuPrep® GMO(Plant) Genomic DNA Extraction Kit


For plant tissue and seed samples; a Spin column based Genomic DNA Extraction Kit– AccuPrep® GMO DNA Extraction Kit



AccuPrep® GMO DNA Extraction Kit allows the extraction of DNA from agricultural products such as beans, corn, and rice or from processed foods such as bean sprouts, tofu and condensed milk, for the detection of GMOs. The kit includes all reagents required for extraction and in addition uses a column type extraction system to allow a more rapid, more convenient extraction of higher-quality DNA when compared to conventional methods. A high amount of high-purity DNA can be extracted; for example, 20 ~ 40 ug of DNA for 1 g of powdered bean, with an A260/A280 ratio of over 1.8

Features and Benefits

Highly purified and high yield genomic DNA can be extracted from various plant samples.

Silica based DNA binding column with high binding capacity.

Optimized plant lysis buffer for efficient lysis.

 

Contents

Components K-3031 (200 reactions)
Lysis buffer (L) 50 ml X 1 ea
Binding buffer (B) 50 ml X 1 ea
Wahsing buffer 1 (W1) 40 ml X 1 ea
Washing buffer 2 (W2) 20 ml X 2 ea
Elution buffer (EL) 25 ml X 1 ea
Proteinase K, lyophilized 25 mg X 2 ea
DNA binding column tube 100 ea X 1 pack
2.0ml tubes for filtration 100 ea X 1 pack
1.5ml tubes for elution 100 ea X 1 pack
Manual 1 ea


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Specifications

Sample Amount Yield
Soybean 100 mg 2 ~ 5 ug
Maize 100 mg 1 ~ 4 ug
Potato 100 mg 1 ~ 4 ug



Applications

Gene cloning, PCR, Quantitative real time PCR, Southern blotting, SNP genotyping

 

Procedure



Experimental Data


Fig. 1 genomic DNAs from 0.1 g of soybean, tofu and maize

Lane M1: Molecular weight marker, λ DNA/EcoR l + Hind lll Markers (D-1070, Bioneer),
Lane M2: Molecular weight marker, 1 kb ladder (D-1040, Bioneer),
Lane 1: Soybean genomic DNALane 2: Tofu genomic DNALane 3: Maize genomic DNA,
* 100 ng of Intact DNA (left) and Hind III (E-1721, Bioneer) enzyme digested DNA (right)


Fig. 2 PCR results for GMO detection

Lane M: Molecular marker, 1 kb ladder (D-1040, Bioneer) Lane 1~5: PCR results for GMO detection

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Manual

AccuPrep® GMO DNA Extraction Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

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AccuPrep® Stool Genomic DNA Extraction Kit


For various types of stool samples; a Spin column based Genomic DNA Extraction Kit – AccuPrep® Stool DNA Extraction Kit



AccuPrep® Stool DNA Extraction Kit is designed for the rapid, convenient extraction of DNA from fresh or frozen stool or other samples containing large amounts of material that can inhibit PCR. Using the spin-column method, contaminants and enzyme inhibitors (such as heparin, bilirubin bile salts, porphyrin) are eliminated and high-purity DNA is obtained, ready for use in a variety of applications.

Features and Benefits

Highly purified and high purity genomic DNA can be extracted from various type of stool samples with optimized Stool lysis buffer to remove the PCR inhibitory materials (heparin, bilirubin ).

Silica based DNA binding column with high DNA binding efficiency.

 

Contents

Components K-3036 (100 reactions)
Stool Lysis Buffer (SL) 50 ml X 1 ea
Binding Buffer (ST) 50 ml X 1 ea
Washing Buffer 1 (W1) 40 ml X 1 ea
Washing buffer 2 (W2) 20 ml X 1 ea
Elution Buffer (E) 25 ml X 1 ea
Proteinase K, lyophilized 25 mg X 2 ea
DNA binding column tube 100 ea X 1 pack
2.0ml tubes for filtration 100 ea X 1 pack
1.5ml tubes for elution 100 ea X 1 pack
Manual 1 ea
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Applications

PCR, real-time PCR, southern blotting, SNP genotyping, pathogen characterization, etc

 

Procedure




Experimental Data

Sample Amount Yield
Stool 100 mg 2 ~ 5 ug
Table 1. Typical Yield


Fig. 1 Gel electrophoresis of stool genomic DNA extracted by AccuPrep® Stool DNA Extraction Kit
Lane M1: Molecular weight marker, λ DNA/EcoR l + Hind lll Markers (D-1070, Bioneer),
Lane M2: Molecular weight marker, 1 kb ladder (D-1040, Bioneer),
Lane 1~3: DNA purified with Bioneer's AccuPrep stool DNA Extraction Kit.
100ng of Intact DNA (left) and Hind III (E-1721, Bioneer) enzyme digested DNA (right)


Fig. 2 PCR results of H. pylori DNA extracted with AccuPrep® Stool DNA Extraction Kit
Lane M: Molecular weight marker, 100 bp ladder (D-1030, Bioneer), Lane 1~4: PCR results for H. pylori detection


 
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Manual

AccuPrep® Stool DNA Extraction Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

 

]]>

Plasmid DNA Extraction Kits


AccuPrep® Nano-Plus Plasmid Maxi Extraction Kit


A novel Plasmid DNA Extraction Kit utilizing unique technology from Bioneer  – AccuPrep® Nano-Plus Plasmid Maxi Extraction Kit : 45 min



The AccuPrep® Nano-Plus Plasmid Maxi Extraction Kit, extracts highly-purified plasmid DNA from cultured bacterial cells in in approximately 60 minutes. The overall principle utilizes a modified alkaline lysis protocol that is enhanced by Bioneer’s novel, patentented Nano-Technology method.

 

Features and Benefits

Principle is based on modified alkaline lysis protocol combined with a novel nano- particle technology

Suitable for both high-copy and low copy number plasmid DNA.

Highly purified and high purity plasmid DNA can be extracted from cultured E.coli cells within 10 min.

Endonuclease A denaturation buffer for the endA+ strains (Denaturation Buffer, Buffer D).

Silica based DNA binding column with high DNA binding efficiency.


Contents

Components K-3131 (25 reactions) K-3132 (10 reactions)
Buffer ① (Resuspension buffer) 240 ml X 1 ea 96 ml X 1 ea
Buffer ② (Lysis buffer) 240 ml X 1 ea 96 ml X 1 ea
Buffer ③ (Neutralization buffer) 240 ml X 1 ea 96 ml X 1 ea
Buffer ④ (Washing buffer) 80 ml X 3 ea 30 ml X 3 ea
Buffer ⑤ (Elution buffer) 50 ml X 1 ea 20 ml X 1 ea
RNase A, lyophilized 24 mg X 1 ea 9.6 mg X 1 ea
Clearing Syringe Filter (30ml) 25 ea X 1 pack 10 ea X 1 pack
DNA Binding Filter Tubes 25 ea X 1 pack 10 ea X 1 pack
Manual 1 ea 1 ea
One Page Protocol 1 ea 1 ea





 

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Specifications

Starting culture volume 100 ml ~
Column binding capacity > 500 ug
Elution volume 1 ml
Expected DNA yield Up to 300 - 500 ug
Preparation time < 60 min

 

Applications

Sub-cloning, Sequencing, Transformation, Trasnfection, In-vitro transcription/ translation


Procedure




Experimental Data

Fig. 1 Reduced Total Prep. Time

The nano-particles which included in the Buffer ①(Resuspension buffer) can make a complex together with insoluble protein aggregate, cell debris and chromosomal DNA in the solution. And the complex can be separated from the solution with simple centrifuge step(10 min.) to obtain a cleared lysate which contains target plasmid DNA
B; AccuPrep® Nano-Plus Plasmid Maxi Extraction Kit, Q, P; Competitors



Fig. 2 Improved Prep. Yield

Plasmid DNA purified with the AccuPrep® Nano-Plus Plasmid Mini Extraction Kit AccuPrep® Nano-Plus Mini Kit provides high yields of plasmid DNA.
B; AccuPrep® Nano-Plus Plasmid Maxi Extraction Kit (K-3131, K-3132), P, Q; competitors


Fig. 3 Restriction enzyme digestion test

Electrophoresis results with extracted plasmid DNA after restriction enzyme digestion with various restriction enzymes. pBS; pBluescript SK(+) with XbaI, pBI121; pBI121 with PstI, Lane M; Molecular Marker (λ-DNA/ HindIII+EcoRI, Cat. No. D-1070, Bioneer), Lane B; AccuPrep® Nano-Plus Plasmid Maxi ExtractionKit, Lane Q, P; competitors


Electrophoresis results with extracted plasmid DNA after restriction enzyme digestion with various restriction enzymes. Left; pBluescriptSK(+), Right; pBI121, Lane M; Molecular Marker (Cat. No. D-1040, Bioneer)




 

 

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Manual

AccuPrep® Nano-Plus Plasmid Extraction Kit (Mini/Midi/Maxi)


MSDS

AccuPrep

Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate


 

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AccuPrep® Nano-Plus Plasmid Midi Extraction Kit


A novel Plasmid DNA Extraction Kit utilizing unique technology from Bioneer – AccuPrep® Nano-Plus Plasmid Midi Extraction Kit : 30 min


The AccuPrep® Nano-Plus Plasmid Midi Extraction Kit extracts highly-purified plasmid DNA from cultured bacterial cells in approximately 40 minutes. The principle utilizes a modified alkaline lysis protocol that is enhanced by a novel, patented Nano-Technology from Bioneer.

Features and Benefits

Principle is based on modified alkaline lysis protocol combined with a novel nano- particle technology

Suitable for both high-copy and low copy number plasmid DNA.

Highly purified and high purity plasmid DNA can be extracted from cultured E.coli cells within 40 min.

 

Contents

Components K-3122 (25 reactions)
Buffer ① (Resuspension buffer) 90 ml X 1 ea
Buffer ② (Lysis buffer) 90 ml X 1 ea
Buffer ③ (Neutralization buffer) 90 ml X 1 ea
Buffer ④ (Washing buffer) 40 ml X 3 ea
Buffer ⑤ (Elution buffer) 50 ml X 1 ea
RNase A, lyophilized 9 mg X 1 ea
Clearing Syringe Filter (10ml) 25 ea X 1 pack
DNA Binding Filter Tubes 25 ea X 1 pack
Manual 1 ea
One Page Protocol 1 ea



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Specifications

Starting culture volume 25 ml ~
Column binding capacity > 100 ug
Elution volume 1 ml
Expected DNA yield Up to 75 - 100 ug
Preparation time < 40 min

 

Applications

Sub-cloning, Sequencing, Transformation, Trasnfection, In-vitro transcription/ translation

 

Procedure


 

Principle

ExiPrep™ Blood Genomic DNA Kit is a product designed to extract high-purity genomic DNA from whole blood samples using the automated nucleic acid extraction instrument ExiPrep™ 16 Plus, ExiProgen™. The lysis buffer and Proteinase K contained within the product will efficiently lysis cells and hydrolysis proteins within whole blood for efficient extraction of genomic DNA. The binding buffer and silica magnetic particles will bind genomic DNA to the surface of the beads. The reaction containers are then subject to a magnetic field, forcing the genomic DNA-bound silica magnetic particles to remain within the container while the reaction mixture and cellular waste are removed. Three types of washing buffers are introduced sequentially during the next step to remove the remainder of cellular waste products. The washing buffers are then siphoned off, while the genomic DNA-bound silica magnetic particles remain bound by the magnetic field. DNase-free elution buffer is then introduced to the silica magnetic particles to release the bound and now purified genomic DNA.

 

Experimental Data

Fig. 1 Reduced Total Prep. Time
The nano-particles which included in the Buffer ①(Resuspension buffer) can make a complex together with insoluble protein aggregate, cell debris and chromosomal DNA in the solution. And the complex can be separated from the solution with simple centrifuge step(5min.) to obtain a cleared lysate which contains target plasmid DNA.
B; AccuPrep® Nano-Plus Plasmid Midi Extraction Kit, Q, P; Competitors



Fig. 2 Improved Prep. Yield

Plasmid DNA purified with the AccuPrep® Nano-Plus Plasmid Mini Extraction Kit AccuPrep® Nano-Plus Midi Kit provides high yields of plasmid DNA.
B; AccuPrep® Nano-Plus Plasmid Midi Extraction Kit, P, Q; competitors 

Fig. 3 Restriction enzyme digestion test

Electrophoresis results with extracted plasmid DNA after restriction enzyme digestion with various restriction enzymes.
pBS; pBluescript SK(+) with XbaI, pBI121; pBI121 with PstI, Lane M; Molecular Marker (λ-DNA/ HindIII+EcoRI, Cat. No. D-1070, Bioneer), Lane B; AccuPrep® Nano-Plus Plasmid Midi Extraction Kit, Lane Q, P; competitors


Electrophoresis results with extracted plasmid DNA after restriction enzyme digestion with various restriction enzymes.
Left; pBluescript SK(+), Right; pBI121, Lane M; Molecular Marker (Cat. No. D-1040, Bioneer)


 

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Manual

AccuPrep® Nano-Plus Plasmid Extraction Kit (Mini/Midi/Maxi)


MSDS

AccuPrep

Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

]]>

AccuPrep® Nano-Plus Plasmid Mini Extraction Kit


A novel Plasmid DNA Extraction Kit utilizing unique technology from Bioneer – AccuPrep® Nano-Plus Plasmid Mini Extraction Kit : 10 min


The AccuPrep® Nano-Plus Plasmid Mini Extraction Kit extracts highly-purified plasmid DNA from cultured bacterial cells in approximately 10 minutes. The overall principle utilizes a modified alkaline lysis protocol that is enhanced by novel, patented Nano-Technology from Bioneer.

Features and Benefits

Principle is based on modified alkaline lysis protocol combined with a novel nano- particle technology

Suitable for both high-copy and low copy number plasmid DNA.

Highly purified and high purity plasmid DNA can be extracted from cultured E.coli cells within 10 min.

Endonuclease A denaturation buffer for the endA+ strains (Denasturation Buffer, Buffer D).

Silica based DNA binding column with high DNA binding efficiency.

 

Contents

Components K-3111 K-3112
(200 reactions) (50 reactions)
Buffer ① (Resuspension buffer) 60 ml X 1 ea 15 ml X 1 ea
Buffer ② (Lysis buffer) 60 ml X 1 ea 15 ml X 1 ea
Buffer ③ (Neutralization buffer) 80 ml X 1 ea 20 ml X 1 ea
Buffer ④ (Washing buffer) 16 ml X 2 ea 4 ml X 2 ea
Buffer ⑤ (Elution buffer) 24 ml X 1 ea 6 ml X 1 ea
Buffer D (Denaturation buffer) 75 ml X 1 ea 18 ml X 1 ea
RNase A, lyophilized 6 mg X 1 ea 1.5 mg X 1 ea
DNA binding column tube 50 ea X 4 box 50 ea X 1 box
Manual 1 ea 1 ea
One Page Protocol 1 ea 1 ea

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Specifications

Starting culture volume 1 ml ~
Column binding capacity > 20 ug
Elution volume 50 – 100 ul
Expected DNA yield Upto 20 ug
Preparation time < 10 min

 

Applications

PCR, real time PCR, Cloning, SNP analysis, Pharmacogenomics, Genetics

 

Procedure




Principle

ExiPrep™ Blood Genomic DNA Kit is a product designed to extract high-purity genomic DNA from whole blood samples using the automated nucleic acid extraction instrument ExiPrep™ 16 Plus, ExiProgen™. The lysis buffer and Proteinase K contained within the product will efficiently lysis cells and hydrolysis proteins within whole blood for efficient extraction of genomic DNA. The binding buffer and silica magnetic particles will bind genomic DNA to the surface of the beads. The reaction containers are then subject to a magnetic field, forcing the genomic DNA-bound silica magnetic particles to remain within the container while the reaction mixture and cellular waste are removed. Three types of washing buffers are introduced sequentially during the next step to remove the remainder of cellular waste products. The washing buffers are then siphoned off, while the genomic DNA-bound silica magnetic particles remain bound by the magnetic field. DNase-free elution buffer is then introduced to the silica magnetic particles to release the bound and now purified genomic DNA.


Experimental Data


Fig. 1 Reduced Total Prep. Time

The nano-particles which included in the Buffer ①(Resuspension buffer) can make a complex together with insoluble protein aggregate, cell debris and chromosomal DNA in the solution. And the complex can be separated from the solution with simple centrifuge step(1min.) to obtain a cleared lysate which contains target plasmid DNA.
B; AccuPrep® Nano-Plus Plasmid Mini Extraction Kit, Q, P; Competitors


Fig. 2 Improved Prep. Yield

Plasmid DNA purified with the AccuPrep® Nano-Plus Plasmid Mini Extraction Kit AccuPrep® Nano-Plus Mini Kit provides high yields of plasmid DNA.
B; AccuPrep® Nano-Plus Plasmid Mini Extraction Kit, P, Q; competitors


Fig. 3 Restriction enzyme digestion test


Electrophoresis results with extracted plasmid DNA after restriction enzyme digestion with various restriction enzymes. pBS - pBluescript SK(+) with XbaI, pBI121 -pBI121 with PstI, Lane M - Molecular Marker(λ-DNA/ HindIII+EcoRI, Cat. No. D-1070, Bioneer), Lane B - AccuPrep® Nano-Plus Plasmid Mini Extraction Kit, Lane Q, P - competitors


Electrophoresis results with extracted plasmid DNA after restriction enzyme digestion with various restriction enzymes. Left - pBluescript SK(+), Right pBI121, Lane M - Molecular Marker(Cat. No. D-1040, Bioneer)





 

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Manual

AccuPrep® Nano-Plus Plasmid Extraction Kit (Mini/Midi/Maxi)

 

MSDS

AccuPrep

 

Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

]]>

AccuPrep® Plasmid Mini Extraction Kit


Plasmid DNA Mini Prep – AccuPrep® Plasmid Mini Extraction Kit


The AccuPrep® Plasmid Extraction Kit is designed for the rapid extraction of high-purity plasmid DNA from bacterial cultures such as E.coli. As a column-type tube is utilized in the purification process, extraction is carried out in three simple steps of binding/ washing/ elution, and use of dangerous organic solvents is avoided for the safe and convenient extraction of high-purity plasmid DNA.

Features and Benefits

Silica based DNA binding column with high DNA binding capacity

Endonuclease A denaturation buffer for the endA+ strains (Denaturation Buffer, Buffer D).

Based on the modified alkaline lysis method

50 well tube rack for the storage of the extracted plasmid DNA

 

Contents

Components K-3030 (200 reactions) K-3030-1 (50 reactions)
Buffer ① (Resuspension buffer) 60 ml X 1 ea 15 ml X 1 ea
Buffer ② (Lysis buffer) 60 ml X 1 ea 15 ml X 1 ea
Buffer ③ (Neutralization buffer) 80 ml X 1 ea 20 ml X 1 ea
Buffer ④ (Washing buffer) 16 ml X 2 ea 4 ml X 2 ea
Buffer ⑤ (Elution buffer) 24 ml X 1 ea 6 ml X 1 ea
Buffer D (Denaturation buffer) 75 ml X 1 ea 18 ml X 1 ea
RNase A, lyophilized 6 mg X 1 ea 1.5 mg X 1 ea
DNA binding column tube 50 ea X 4 box 50 ea X 1 box
Manual 1 ea 1 ea
One Page Protocol 1 ea 1 ea





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Specifications

Starting culture volume 1 ml ~ 10 ml
Column binding capacity > 20 ug
Elution volume 50 – 100 ul
Expected DNA yield Upto 20 ug
Preparation time < 10 min

 

Applications

Sub-cloning, Sequencing, Transformation, Trasnfection, In-vitro transcription/ translation

 

Procedure




Experimental Data


Fig. 1 Improved Yield
Plasmid DNA purified with the AccuPrep® Nano-Plus Plasmid Mini Extraction Kit AccuPrep® Nano-Plus Mini Kit provides high yields of plasmid DNA.
Lane B; AccuPrep® Plasmid Mini Extraction Kit, Lane 2, 3; competitors


Fig. 2 Restriction enzyme digestion test
200ng of extracted plasmid DNA(pBluescript SK(+)) was digested with XbaI. Each enzymes completely recognize its restriction enzyme site and digest.
Lane M; Molecular weight marker(λDNA/HindIII+EcoRI, Cat. No. D-1070, Bioneer)
Lane 1; AccuPrep® Plasmid Mini Extraction Kit Lane 2, 3; competitors


200ng of extracted plasmid DNA(pBluescript SK(+)) was digested with various restriction enzymes. Each enzymes completely recognize its restriction enzyme site and digest.
Lane M; Molecular weight marker(λDNA/HindIII+EcoRI, Cat. No., D-1070, Bioneer)
K; Kpn I, X; Xho I, SI; Sal I, H; Hind III, E; EcoR I, P; Pst I, Sm; Sma I, B; Bam HI, S; Spe I, Xb; Xba I, N; Not I, Sc;Sac I
 

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Manual

AccuPrep® Plasmid Mini Extraction Kit


MSDS

AccuPrep


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate


 

]]>

AccuPrep® Viral RNA Extraction Kit


For various clinical sample applications; Spin column based Viral RNA Extraction Kit – AccuPrep® Viral RNA Extraction Kit


AccuPrep® Viral RNA Extraction Kit is designed for the rapid and convenient extraction of viral RNA from cell-free samples as serum, plasma, CSF, urine, etc. This kit can be used for extracting RNA from a variety of RNA viruses, such as HIV, HAV, HCV, enteroviruses. 
NB: not all viruses can be utilized as a source. Also, as it is difficult to extract only RNA from samples containing both DNA and RNA, a cell-free sample is required in order to prevent DNA contamination.

Features and Benefits

Highly purified and high purity viral RNA can be extracted from various clinical samples (whole blood, CSF, urine, swab…).

Silica based RNA binding column with high RNA binding efficiency.

Poly (A) (provided) can protect RNA degradation during the extraction steps and enhance the binding efficiency.

 

Contents

Components K-3033 (100 reactions)
Binding buffer (VB) 60 ml X 1 ea
Wahsing buffer 1 (W1) 40 ml X 1 ea
Washing buffer 2 (W2) 20 ml X 1 ea
Elution buffer (EL) 10 ml X 1 ea
Poly (A), lyophilized 2 mg X 1 ea
RNA binding column tube 100 ea X 1 pack
2.0ml tubes for filtration 100 ea X 1 pack
1.5ml tubes for elution 1 ea


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Applications

cDNA synthesis, RT-PCR, Quantative real-time RT-PCR, poly A+ RNA selection, Northern blot analysis, pathogen detection

 

Procedure




Experimental Data

Fig. 1 The RT-PCR results of HCV-specific RNA obtained from HCV-positive serum by using AccuPrep® Viral RNA Extraction Kit.

Lane M; Molecular weight marker, 100bp ladder (D-1030, Bioneer), Lane1, 2; 216bp HCV product

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Manual

AccuPrep® Viral RNA Extraction Kit


MSDS

AccuPrep


Brochure

• AccuPrep® Viral RNA Extraction Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

]]>

AccuPrep® PCR Purification Kit


For various enzymatic reaction product, Spin column type fragment DNA Purification Kit – AccuPrep® PCR Purification Kit


AccuPrep® PCR Purification Kit is designed for the purification of up to 10 ug of DNA fragment from PCR and other enzymatic products within 5 minutes. The size range for effective purification is 100 bp ~10 kb, thus common 20 ~ 40 mer oligonucleotides are removed. The recovery yield exceeds 70~90%. Elution volume can be as little as 30 uL when concentrated product is needed.


Features and Benefits

Completely purify the fragment DNA from various enzymatic reaction products within 5 min.

Highly purified and high yield fragment DNA can be purified from various enzymatic reaction products (restriction enzyme digestion, A-tailing, labeling…).

Double strand and single strand DNA can be purified with high recovery.

Usable range is 100bp to 10kb with 70%-90% recovery.

Silica based DNA binding column with high binding efficiency.

 

Contents

Components K-3034 (200 reaction) K-3034-1 (50 reaction)
Buffer ① (PCR Binding buffer) 120 ml X 1 ea 25 ml X 1 ea
Buffer ② (Wahsing buffer) 25 ml X 2 ea 6 ml X 2 ea
Buffer ③ (Elution buffer) 15 ml X 1 ea 15 ml X 1 ea
DNA binding column tube 50 ea X 4 box 50 ea X 1 box
Manual 1 ea 1 ea
One Page Protocol 1 ea 1 ea
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Applications

Sub-cloning, Sequencing, Labeling, DNA concentration, etc


Procedure




Experimental Data

Fig. 1 Typical recovery

The figure shows recovery percentage after purification of DNA amplified by PCR.
The 70 % - 90 % of DNA were recovered regardless of DNA size(0.2 - 6.0 kb).
B; AccuPrep® PCR Purification Kit (K-3034, K-3034-1), Q; Competitor


Fig. 2 Recovery analysis of the purified PCR product
Lane M; Molecular weight marker, 100 bp Plus ladder (D-1035, Bioneer),
Lane 100 ~ 50; control DNA(100% ~ 50%),
Lane B; purified PCR product



 

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Manual

AccuPrep® PCR Purification Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

 

]]>

AccuPrep® Gel Purification Kit


For the fragment DNA purification from the Agarose gel, Spin column type fragment DNA Extraction Kit – AccuPrep® Gel Purification Kit



AccuPrep® PCR Purification Kit is designed for the purification of up to 10 ug of DNA fragment from low-melting, TAE, TBE agarose gel fraction within 15 min. Provided Gel binding buffer can extracts the target DNA fragment from the agarose gel into the solution. The recovery yield exceeds 70~90%

Features and Benefits

Completely purify the fragment DNA from low-melting, TAE, TBE agarose gel fraction within 15 min.

Usable range is 100bp to 10kb with 70%-90% recovery.

Silica based DNA binding column with high binding efficiency.

 

Contents

Components K-3035 (200 reaction) K-3035-1 (50 reaction)
Buffer ① (Gel Binding buffer) 120 ml X 2 ea 30 ml X 2 ea
Buffer ② (Wahsing buffer) 25 ml X 2 ea 6 ml X 2 ea
Buffer ③ (Elution buffer) 15 ml X 1 ea 15 ml X 1 ea
DNA binding column tube 50 ea X 4 box 50 ea X 1 box
Manual 1 ea 1 ea
One Page Protocol 1 ea 1 ea

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Applications

Sub-cloning, Sequencing, Labeling, DNA concentration, etc

 

Procedure




Experimental Data


Fig. 1 Typical recovery

Comparison between AccuPrep® Gel Purification Kit and competitor.
This data shows the superior yield of AccuPrep® Gel PurificationKit as competing products.
B; AccuPrep® Gel Purification Kit (K-3035, K-3035-1), Q; competitor


Fig. 2 Recovery analysis of the purified fragment DNA

0.0 kb of plasmid DNA was purified from agarose gel after restriction enzyme digestion.
Lane M; Molecular weight marker, 100 bp Plus ladder (D-1035, Bioneer), Lane 100 ~ 50; control DNA(100% ~ 50%),
Lane B; AccuPrep® Gel Purification Kit (K-3035, K-3035-1)


 

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Manual

AccuPrep® Gel Purification Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate


 

]]>

Plasmid DNA Extraction Kits


High-Throughput Plasmid DNA Mini Prep Kit – AccuPrep® Plasmid Mini Extraction Kit for 96 well vacuum manifold

AccuPrep® Plasmid Extraction Kit for Biovac 96 Vacuum Manifold can simultaneously extract plasmid DNA from 96 different samples using a Biovac 96 vacuum manifold (A-9030, Bioneer). The extracted plasmid DNA can be directly used for restriction enzyme digestion, PCR, sequencing, transformation, and cloning, without having to undergo any additional purification steps. The 96 samples can be handled without additional machinery such as a centrifuge. This product is also available to other companies' vacuum manifold system (QIAGEN, Promega and Axygen).

 

Features and Benefits

96 well binding plates with high binding efficiency

Endonuclease A denaturation buffer for the endA+ strains (Denaturation Buffer, DE Buffer).

The 96 samples can be handled without additional instruments.

Available to other companies' vacuum manifold system.

 

Contents

Components K-3030-2 (192 reaction)
RS Buffer (Resuspension buffer) 30 ml X 2 ea
BL Buffer (Lysis buffer) 60 ml X 1 ea
RB Buffer (Neutralization buffer) 60 ml X 1 ea
WB Buffer (Washing buffer) 20 ml X 2 ea
EL Buffer (Elution buffer) 60 ml X 1 ea
DE Buffer (Denaturation buffer) 75 ml X 1 ea
RNase A, lyophilized 3 mg X 2 ea
96 well trapping plate 2 ea
96 well binding plate for plasmid 2 ea
96 well dome plate 2 ea
96 well RV plate 2 ea
96 well sealing tape 2 ea
Manual 1 ea
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Genomic DNA Extraction Kits


Fragment DNA Purification Kits


AccuPrep® Genomic DNA Extraction Kit For 96 well vacuum block


High-Throughput Genomic DNA Extraction Kit– AccuPrep® Genomic DNA Extraction Kit for 96 well vacuum manifold

AccuPrep® Genomic DNA Extraction Kit can rapidly and conveniently extract genomic DNA from blood, lymphocyte, buffy coat, tissue and cultured cell. This process does not require phenol/chloroform extraction, alcohol precipitation, nor other burdensome steps. Our Kit employs spin column type. Proteins and other contaminants which can inhibit enzyme reaction or PCR are eliminated through series of short wash-and-spin steps. The isolated DNA is ready to use in various applications.

 

Features and Benefits

Highly purified and high yield genomic DNA can be extracted from whole blood, animal tissue, cultured cells.

96 well binding plates with high binding efficiency.

The 96 samples can be handled without additional instruments.

Available to other companies' vacuum manifold system.

 

Contents

Components K-3032-2 (192 reaction)
Binding buffer (B) 50 ml X 1 ea
Wahsing buffer 1 (W1) 80 ml X 1 ea
Washing buffer 2 (W2) 50 ml X 1 ea
Elution buffer (E) 50 ml X 1 ea
Proteinase K, lyophilized 25 mg X 4 ea
96 well binding plate 2 ea
96 well silicon cover 2 ea
96 well binding plate 2 ea
96 well sealing tape 4 ea
Manual 1 ea
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Specifications

Sample Amount Yield
Whole blood 200 ul Up to 3 ug
Buffy coat 200 ul Up to 10 ug
Cultured cells 104 ~ 108 cells Up to 10 ug

Applications

Gene cloning, PCR, real time PCR, Southern blotting, SNP genotyping


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Manual

AccuPrep® Genomic DNA Extraction Kit for 96 well vacuum manifold


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

]]>

AccuPrep® Plasmid DNA Extraction Kit For 96 well vacuum block


High-Throughput Plasmid DNA Mini Prep Kit – AccuPrep® Plasmid Mini Extraction Kit for 96 well vacuum manifold

AccuPrep® Plasmid Extraction Kit for Biovac 96 Vacuum Manifold can simultaneously extract plasmid DNA from 96 different samples using a Biovac 96 vacuum manifold (A-9030, Bioneer). The extracted plasmid DNA can be directly used for restriction enzyme digestion, PCR, sequencing, transformation, and cloning, without having to undergo any additional purification steps. The 96 samples can be handled without additional machinery such as a centrifuge. This product is also available to other companies' vacuum manifold system (QIAGEN, Promega and Axygen).

 

Features and Benefits

96 well binding plates with high binding efficiency

Endonuclease A denaturation buffer for the endA+ strains (Denaturation Buffer, DE Buffer).

The 96 samples can be handled without additional instruments.

Available to other companies' vacuum manifold system.

 

Contents

Components K-3030-2 (192 reaction)
RS Buffer (Resuspension buffer) 30 ml X 2 ea
BL Buffer (Lysis buffer) 60 ml X 1 ea
RB Buffer (Neutralization buffer) 60 ml X 1 ea
WB Buffer (Washing buffer) 20 ml X 2 ea
EL Buffer (Elution buffer) 60 ml X 1 ea
DE Buffer (Denaturation buffer) 75 ml X 1 ea
RNase A, lyophilized 3 mg X 2 ea
96 well trapping plate 2 ea
96 well binding plate for plasmid 2 ea
96 well dome plate 2 ea
96 well RV plate 2 ea
96 well sealing tape 2 ea
Manual 1 ea
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Specifications

Starting culture volume 1 ml ~ 10 ml
Elution volume 50 – 100 ul
Expected DNA yield up to 10 ug
Preparation time < 40 min

 

Applications

Sub-cloning, Sequencing, Transformation, Trasnfection, In-vitro transcription/ translation

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Manual

AccuPrep® Plasmid Mini Extraction Kit for 96 well vacuum manifold


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

]]>

AccuPrep® PCR Purification Kit For 96 well vacuum block


High-Throughput PCR Purification Kit – AccuPrep® PCR Purification Kit for 96 well vacuum manifold

AccuPrep® PCR Purification Kit for Biovac 96 Vacuum Manifold is a high-throughput PCR purification kit that can purify PCR products and eliminate primers, enzymes, dNTPs, salts and buffer. By using the special Biovac 96 Vacuum Manifold developed by Bioneer, 96 separate PCR products can be simultaneously purified in 25 minutes. This product is also available to other companies' vacuum manifold system (QIAGEN, Promega and Axygen).

 

Features and Benefits

Highly purified and high yield fragment DNA can be purified from various enzymatic reaction products
(restriction enzyme digestion, A-tailing, labeling…).

Double strand and single strand DNA can be purified with high recovery.

Usable range is 100bp to 10kb with 70%-90% recovery.

96 well binding plates with high binding efficiency.

The 96 samples can be handled without additional instruments.

Available to other companies' vacuum manifold system.

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Application

Sub-cloning, Sequencing, Labeling, DNA concentration, etc




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Manual

AccuPrep® PCR Purification Kit for 96 well vacuum manifold


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

]]>

DNA Extraction Kits


RNA Extraction Kits


DNA PrepMate™ - II


Widely applicable Silica resin type DNA Purification Kit – DNA PrepMate™-II


DNA PrepMate™ -II uses a binding buffer and sillica matrix system being optimal condition to separate and purify DNA effectively. Thus the purified DNA can be directly used in applications such as PCR, restriction enzyme, labeling, cloning, and sequencing.


Features and Benefits

Experiments Time
15 min.(the case of PCR product purification), 40 min.(the case of plasmid extraction)

Sample source
Cultured bacterial cells, PCR products, Agarose gel fragments, Enzyme reaction mixtures, etc.

Application
PCR, Restriction enzyme reaction, Labeling, Cloning, Sequencing

 

Contents

Components Quantity Note
SM Suspension (Silica-based matrix) 4ea 0.5 ml
SB Buffer 2 ea 100 ml
W Buffer 2 ea 20 ml
E Buffer 1 ea 15 ml
Manual 1 ea  
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Procedure

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Manual

DNA PrepMate™ - II


Quality Assurance

 

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

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DNA PrepMate™ - M


Solution type Bacterial genomic DNA Extraction Kit for Various clinical samples – DNA PrepMate™-M



DNA PrepMate™ - M is used to extract DNA from microorganisms with tough cell walls such as M. tuberculosis complex (M. tuberculosis and M. bovis) and Mycoplasma pneumoniae using standard home microwave oven. The reagents are also useful in a variety of clinical fluids such as sputum and pleural fluid.


Features and Benefits

Advantages
DNA can be extracted from microorganisms efficiently with tough cell wall, such as Mycoplasma and clinical fluids. It is not necessary to treat the sample with harmful organic solvents.

Experiments Time
40 min.(the case of sputum, CSF/Urine, pleural fluid)

Sample source
M. tuberculosis complex, Sputum, CSF/Urine, Pleural fluid, Tissue, Cultured cell

 

Contents

Components Quantity Note
Hydrolysis buffer 1ea 30 ml
10X Washing Buffer 1ea 100 ml
Lysis Buffer 1ea 15 ml
8-MOP solution 1ea 10 ml
Manual 1ea  
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Applications

PCR, Quantitative real time PCR

 

Procedure

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Manual

DNA PrepMate™ - M


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate


 

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AccuZol™ Total RNA Extraction Solution


RNA Extraction – AccuZol™ Total RNA Extraction Solution



AccuZol™ is a ready-to-use reagent for the isolation of total RNA from various sample materials.
A monophasic solution of phenol and guanidine-salt inhibits RNase activity, and so the reagent maintains integrity of the RNA during sample homogenization or lysis.
AccuZol™ allows you to extract high-yield total RNA with small quantities of starting materials.

Features and Benefits

Simplicity
AccuZol™ minimize the steps handle hazardous reagents so that RNase/DNase contamination keeps to a minimum.

Experiment Time
The procedure for total RNA isolation can be completed in 1 hour.

Sample Source
Tissues and cultured cells originated from human, animals, plant, and bacteria, or blood samples.

Easy Phase Separation
Green colored reagent is useful to distinguish between organic phase and aqueous phase.

Application
cDNA synthesis, RT-PCR, Real-time RT-PCR, Northern/dot blot analysis, RNase protection assays, Molecular cloning


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Specifications
  Samples Starting volume Elution volume Average yield (ug)
Animal Tissue Liver
Kidney
Spleen
Lung
Brain
10 mg 50ul 50 - 70
25 - 40
40 - 60
15 - 25
8 - 12
Cultured Cell HeLa
A549
PC3
1 x 106 cells 50ul 15 - 30
15 - 25
15 - 25
Bacterial Cell E.coli 1 x 107 cells 50ul 10 - 15
Plant Tissue Bean leaf 100 mg 50ul 30 - 50
Blood Human whole blood 250 ul 50ul 2 - 3

 

Applications

cDNA synthesis, Northern blotting, RT-PCR, real time RT-PCR

 

Procedure




Experimental Data


Fig. 1 Electrophoresis Pattern of total RNA extracted from animal tissues by AccuZol

Total RNA was isolated from 10-20mg of rat tissues and 2 ug of total RNA was loaded per lane on a 1% denaturing agarose gel.


Fig. 2 Electrophoresis Pattern of total RNA extracted from human cell lines by AccuZol

Total RNA was isolated from 1x106 cultured cells and 1 ug of total RNA was loaded per lane on a 1% denaturing agarose gel.



Fig. 3 Electrophoresis Pattern of total RNA extracted from plant by AccuZol

Total RNA was isolated from 100mg of bean leaves and 1 ug of total RNA was loaded per lane on a 1% denaturing agarose gel.


Fig. 4 RT & PCR analysis of total RNA extracted from rat tissues by AccuZol

This analysis was performed with RT/PCR Premix (Bioneer, K-2055) and rat GAPDH primer. The electrophoresis pattern shows clear bands PCR products


Fig. 5 RT & PCR analysis of total RNA extracted from human cell lines by AccuZol

This analysis was performed with RT/PCR Premix (Bioneer, K-2055) and human GAPDH primer. The electrophoresis pattern shows clear bands PCR products.
 

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Manual

AccuZol™ Total RNA Extraction Solution


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate


 

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Viral RNA PrepMate™


For various clinical samples, Phenol based solution type Viral RNA Extraction Kit – Viral RNA PrepMate



Viral RNA PrepMate™ can extract the total RNA from RNA viruses such as HCV using conventional guanidium salt lysis method. The extracted viral RNA can be used as a template of the RT-PCR or quantitative real time RT-PCR for the HCV, HIV detection.

Features and Benefits

Advantages
The steps requiring hazardous solutions have been minimized, safety is increased and contamination with RNase is reduced. Genomic DNA contamination is minimal even without DNase treatment.

Experiment Time
40 min.(in the case of serum)

Sample source
RNA Virus (HCV), Tissue, Serum, Cultured cell, Leucocyte

Application
RT-PCR, Quantitative real time RT-PCR, cDNA synthesis

 

Contents

Components Quantity Note
Lysis Buffer 1 ea 100 ml
RNA Hydration Buffer 1 ea 10 ml
Manual 1 ea  
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Applications

RT-PCR, Quantitative real time RT-PCR, cDNA synthesis

 

Procedure

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Manual

Viral RNA PrepMate


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

]]>

Blood RNA PrepMate™


For Blood sample, Phenol based solution type RNA Extraction Kit – Blood RNA PrepMate



Blood RNA PrepMate™ includes Blood Buffer for the extraction of total RNA from blood using the conventional guanidium salt-lysis method. This versatile kit can extract total RNA not only from blood but also tissue, cultured cells, leucocytes, serum, etc., using suspension buffer and lysis buffer. The extracted RNA can be used as a template of the RT-PCR or quantitative real time RT-PCR and cDNA synthesis, cDNA library construction, Microarray.

Features and Benefits

Advantage
As steps requiring hazardous solutions have been minimized, safety is increased and contamination with RNase is reduced. Genomic DNA contamination is minimal even without DNase treatment.

Experiment Time
1 hr (in case of serum)

Sample source
Blood, Tissue, Serum, Cultured cell, Leucocyte

 

Contents

Components Quantity Note
Blood Buffer 1 ea 100 ml
Suspension Buffer 1 ea 50 ml
Lysis Buffer 1 ea 100 ml
RNA Hydration Buffer 1 ea 10 ml
Manual 1 ea  
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Applications

RT-PCR, Quantitative real time RT-PCR, cDNA synthesis, cDNA library, Microarray


Procedure

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Manual

Blood RNA PrepMate™


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

]]>

Tissue RNA PrepMate™


For various type of Animal tissue samples, Phenol based solution type RNA Extraction Kit – Tissue RNA PrepMate



Tissue RNA PrepMate™ uses a modified guanidium salt-lysis method to optimally extract total RNA from tissue. The amount of extracted total RNA can differ according to the tissue or cell type, so the starting amount should be adjusted to your needs. The extracted viral RNA can be used as a template of the RT-PCR or quantitative real time RT-PCR and cDNA synthesis, cDNA library construction, Microarray.


Features and Benefits

Advantage
It is extracted through the following steps; lysis, phenol:chloroform (5:1), and isopropanol precipitation. Genomic DNA contamination is minimal, even without DNase treatment. Total RNA is extracted quickly with high purity (OD260/280 > 1.8).

Experiment Time
1 hr (in case of tissue)

Sample source
Tissue, Serum, Cultured cell, Leucocyte

Application
Northern analysis, dot blot hybridization, poly (A) selection, RNase protection assay, RT-PCR and Cloning.

 

Contents

Components Quantity Note
Lysis Buffer 1 ea 100 ml
Phenol/ Chloroform (5:1) 1 ea 100 ml
RNA Hydration Buffer 1 ea 10 ml
Manual 1 ea  
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Applications

Northern /dot blot analysis, polyA+ selection, RNase protection assay, RT-PCR, real-time RT-PCR, cloning

 

Procedure
 

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Manual

Tissue RNA PrepMate™


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

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BioVac™ 96 Vacuum Manifold




BioVac™ 96 Vacuum Manifold is designed to aid in the extraction of DNA/RNA from up to 96 samples with Bioneer’s 96-well type nucleic acid purification kits.
BioVac™ 96 Vacuum Manifold employs a vacuum pump to lower pressure and simplify the washing step. A waste tray is attached for added convenience.

Features and Benefits

  • Faster processing: Handles 96 samples at once
  • Paralell handling: Reproducible and consistent processing
  • Value pricing: Great value for your dollar
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Manual

• BioVac Vacuum Manifold


Brochure

DNA-RNA Preparation 2010 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

 

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ExiProgen™ EC1 Protein Synthesis Kit


ExiProgen™ EC1 Protein Synthesis Kit is designed for synthesis and
purification of high-quality protein in under 6 hours —
simply add template DNA.


Bioneer's ExiProgen™ EC1 Protein Synthesis Kit is designed for in vitro (cell-free) expression and high-yield Histidine-Tag affinity purification of proteins by using the world's first automated protein synthesis and nucleic acid extraction system "ExiProgen™". 1 to 16 different types of highly pure proteins can be obtained from each run. Each reaction needs only 6-10 µg of DNA, which can be in the form of an expression vector such as Bioneer's pBIVT or a PCR product using the ExiProgen™ ProXpress PCR Template Kit. Because the entire process is automated, you will obtain reliable and reproducible results run after run.


Principle of protein synthesis and purification

ExiProgen™ EC1 Protein Synthesis Kit contains optimized reagents for efficient expression of various protein types, and also contains reagents and Ni-NTA magnetic beads for purification of expressed proteins. Target proteins synthesized from recombinant plasmid DNAs are bound to Ni-NTA magnetic beads and washed with washing buffer for highly pure proteins.

Features and Benefits

Fully automatic: DNA-in-Protein-out
Input 6~10ug of template DNA and load the kit into ExiProgen™ for high-purity proteins within 6 hours.

Parallel Process
Obtain from 1 to 16 different proteins in a single run.

High performance
The system allows for synthesis of proteins that are toxic to in vivo expression systems.

High purity and High yield
Each reaction well will yield up to 100ug protein that is over 90% pure.

Reproducibility
The only hands-on step is the addition of template DNA, maximizing reproducibility.

Fast process
The in vitro (cell-free) protein synthesis system does not require a time-consuming cell culture process.
 




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Principle of Protein Synthesis with ExiProgen

This product is intended to be used with Bioneer's automated system ExiProgen™ for expression and purification of proteins, and the principle of the product is illustrated in the following figure.




Left panel: Manual method of protein expression/purification – sequential and tedious
Right panel: Bioneer's automated method of protein expression/purification – simply add DNA and press start!

Template DNA

The template DNA for expression by ExiProgen™ EC1 Protein Synthesis Kit must have a "T7 promoter – ribosomal biding site (RBS) – target gene – T7 terminator" structure, and target gene must contain a histidine tag coding sequence at N-terminus or C-terminus for the protein purification.


Maximization of Protein Expression

Protein can be normally synthesized with 6-10 µg of template DNA, but the yield of protein synthesized in the reaction depends on the amount of DNA used for expression. Therefore, a preliminary experiment described as below is recommended to determine the amount of template DNA to maximize the expression of each protein using the AccuRapid™ Cell-free Protein Expression Kit. Note that more DNA is not always better!



 

Example: Synthesis of poly(A) polymerase

1. Determination of the optimal amount of template DNA for the expression of poly(A) polymerase using AccuRapid™ Cell-Free Protein Expression Kit
; Poly(A) polymerase was maximally expressed with the AccuRapid™ kit when 400 ng of pET-poly(A) polymerase was used.


Lane M: AccuLadder™ Protein Size Marker (Broad), Lane NC: Negative Control, Lane PC: Positive Control (CAT), Lane 1 - 6: 50, 100, 200, 400, 600, and 800 (ng) of pET-poly(A) polymerase

2. Protein synthesis using ExiProgen™ EC1 Proteins Synthesis Kit
6.7 ug of pET-poly(A) polymerase was used to synthesize poly(A) polymerase with the EC1 kit (400 ng x 16.7 = 6.7 ug)


Lane M: AccuLadder™ Protein Size Marker (Low)
Lane E: Expression Sample
Lane P: Purification Sample

 

Kit Contents and Storage Condition

Components Storage condition
Kit-1
(Purification kit)
Cartridge ① 4 °C
Disposable filter tip Room temperature
Kit-2
(Expression kit)
Cartridge ② -20 °C
Positive control DNA in 1.5 ml tube -20 °C
E. coli cell extract in 8-strip tubes -70°C
Elution tube and cap Room temperature

This product contains a "Purification Kit (Kit 1)" and an "Expression Kit (Kit 2)". A Cell Extract (8-well strip tube) containing T7 RNA Polymerase and ribosomes is included separately. Cartridge ② contains a master-mix containing reagents necessary for RNA synthesis and protein expression, and Cartridge ① contains Ni-NTA magnetic beads and other buffers necessary for purification of His-tagged proteins. (The Ni-NTA magnetic beads are provided in a 20% ethanol at 10% (w/v) concentration.)


Experimental Data

1. Reproducibility: ExiProgen™ EC1 Protein Synthesis Kits provide reproducible results, the first time and every time.

Figure 1. Expression and purification of CAT. Reproducibility is seen in all 16 wells with no detectable variation between wells.
Lane 1~16: Number of the well,
M : AccuLadder™ Protein Size Marker (Low),
E : Expression sample,
P : Purification sample
 

2. Flexibility: Proteins as small as 10 kD and as large as 120 kD have been expressed/purified with ExiProgen™.


Figure 2. Expression and purification of various proteins. Up to 16 types of proteins can be expressed and purified simultaneously with an average of over 90% purity.
Top of the lane: Name of the protein,
M : AccuLadder™ Protein Size Marker (Low),
E : Expression sample,
P : Purification sample
 

3. Control: Each kit comes with a Green Fluorescent Protein positive control providing confidence in the results.

Figure 3. Detection of fluorescence emitted from fluorescent proteins synthesized with ExiProgen™.
This result indicates that these synthesized SfGFP, RFP, and AcGFP are functionally active.
Left panel: Color of each protein elution samples detected with naked eyes.
Right panel: Fluorescence from protein elution samples detected with UV illuminator.


Figure 4. Expression and purification of fluorescent proteins.
Top of the lane: Protein name,
Lane M: AccuLadder™ Protein Size Marker (Broad),
Lane E: Expression sample,
Lane P: Purification sample
 

4. Functionality: Proteins expressed/purified with ExiProgen™ can be assayed for functionality and the resulting proteins will generally yield up to 100 µg or > 90% pure protein. Many established recombinant proteins can be expressed in E. coli extracts with full functional activity.


Figure 5. Expression and purification of DUSP3 (protein tyrosine phosphatase).
Lane M: AccuLadder™ Protein Size Marker (Low),
Lane E: Expression sample,
Lane P: Purification sample


Figure 4. DUSP3 synthesized with ExiProgen™ has an enzyme activity.
TDUSP3 phosphatase activity was measured by incubating with 500 uM 3-O-methylfluorescein phosphate (OMFP).
(Reaction buffer : 100 mM Tris-HCl (pH8.2), 40 mM NaCl, 1 mM DTT, 20% Glycerol)








Lane M: AccuLadder™ Protein Size Marker (Broad), Lane NC: Negative Control, Lane PC: Positive Control (CAT), Lane 1 - 6: 50, 100, 200, 400, 600, and 800 (ng) of pET-poly(A) polymerase

2. Protein synthesis using ExiProgen™ EC1 Proteins Synthesis Kit
6.7 ug of pET-poly(A) polymerase was used to synthesize poly(A) polymerase with the EC1 kit (400 ng x 16.7 = 6.7 ug)

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Application Note

ExiProgen™_Application_Fluorescent proteins

ExiProgen™_Application_High molecular weight protein

ExiProgen™_Application_in vivo protein expression pET vectors


Manual

ExiProgen™ EC1 Protein Synthesis Kit



Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

 

FAQ
 

Q1. How long does it take to obtain purified proteins after adding template DNA to the reaction well of the kit?


Q2. What kind of template DNA is used for ExiProgen™ EC1 Protein Synthesis Kit?


Q3. How much template DNA is used for each protein synthesis reaction?


Q4. Does the purity of template DNA and codon optimization affect protein synthesis?


Q5. How much protein can be obtained using this kit?


Q6. What size of protein can be synthesized with this kit?


Q7. What is the storage temperature for this kit?

 

 

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AccuRapid™ Cell-Free Protein Expression Kit


AccuRapid™ Cell-Free Protein Expression kit is designed for in vitro transcription and translation of target DNA to protein in a single reaction.

AccuRapid™ Cell-Free Protein Expression Kit contains an optimized E. coli extract containing T7 RNA polymerase for transcription and all necessary components for translation. When combined with the AccuRapid™ Master mix supplied in the kit, all other required components including amino acids, rNTPs, and appropriate salts are provided enabling the expression of high levels of recombinant proteins. This kit contains reagents for 24 reactions, and each 45 ul reaction can express up to 20 ug of protein in only 3 hours directly from a variety of DNA templates which contain T7 promoter, T7 terminator and RBS (ribosomal binding site).

 

Features and Benefits

  • DNA-in-Protein-out simplicity: Simply add expression vector of PCR products to the Cell-Free Protein Extract/MasterMix.
  • Rapid protocol: The entire protocol is complete in 3 hours!
  • Excellent yield: Each reaction well can yield up to 20 ug of protein in only 3 hours.
  • Reproducibility: Minimal pipetting steps to maximize reproducibility.

Kit Contents
AccuRapid™ Cell-Free Protein Expression kit
(Cat. No. K-7250)
AccuRapid™ Master mix 170㎕×3 tube(Red Cap)
AccuRapidE.coli extract 100㎕×3 tube(Blue Cap)
DNA template 24㎕×1 tube(Green Cap)
DEPC-DW 1㎖×1 tube(White Cap)

Storage conditions

-20°C (E.coli extract ; -70°C)



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Principle of Cell-Free Protein expression system
 
Template DNA

The template DNA for expression by AccuRapid™ Cell-Free Protein Expression Kit must have a "T7 promoter – ribosomal biding site (RBS) – target gene – T7 terminator" structure, and target gene must contain a histidine tag coding sequence at N-terminus or C-terminus for the protein purification.


Note 1) We recommend cloning the template DNA into our in vitro transcription/translation optimized pBIVT vector set (sold separately).
Note 2) Sometimes pET vector series such as pET15b, 22b, 23a, and 28b can also be used for the kit, though this should be tested. In addition PCR products containing T7promoter, ribosomal binding site, T7 terminator, and His-tag encoding sequences at N- or C-terminus can be used for proteins synthesis as a template DNA. The ExiProgen™ ProXpress PCR Template Kit can generate PCR templates for this purpose.
Note 3) It is recommended to use E.coli codon-optimized gene constructs, which will improve protein expression.
Note 4) The DNA template for protein expression can be synthesized through our Gene Synthesis Service, which optimizes the codons for E.coli protein expression. The synthesized gene can be cloned into our in vitro transcription/translation vector by request.

 

Experimental Data

1. Protein Expression using AccuRapid™ Cell-Free Protein Expression Kit


Figure 1. Protein expression Data of AccuRapid™ Cell-Free Protein Expression kit (SDS-PAGE and Coomassie Brilliant Blue staining)
Lane M; AccuLadder™ Protein Size Marker (Low),
Lane 1,3,5; Negative control (No-DNA),
Lane 2; CAT (Chloramphenicol acetyl transferase),
Lane 4; GFP (Green fluorescence protein),
Lane 6; PTP1B(Protein tyrosine phosphatase 1B)

2. AccuRapid™ Cell-Free Protein Expression Kit expresses proteins efficiently
 


Figure 2. Comparison of protein expression between AccuRapid™ Cell-Free Protein Expression Kit and protein expression kits from other companies (SDS-PAGE and Coomassie Brilliant Blue staining).
Lane M; AccuLadder™ Protein Size Marker (Low),
Lane 1,3,5 ; Negative control (No-DNA),
Lane 2; Bioneer's Kit and control DNA,
Lane 4; Company A's Kit and control DNA,
Lane 6; Company B's Kit and control DNA
 

3. Determination of the optimal amount of template DNA for cell-free protein synthesis using AccuRapid™ Cell-Free Protein Expression Kit

3.1. pBIVT vector construct: GFP

Figure 3. Determination of the optimal amount of template DNA for the expression of GFP using AccuRapid™ Cell- Free Protein Expression Kit . GFP was maximally expressed with the AccuRapid™ Cell-Free Protein Expression Kit when 200 ng of pBIVT-GFP was used.
Lane M; AccuLadder™ Protein Size Marker (Low),
Lane 1; Negative Control (No-DNA),
Lane 2; CAT (Chloramphenicol acetyl transferase),
Lane 3 ~9; pBIVT-GFP (50, 100, 200, 400, 600, 800, 1000 (ng))


3.2. pET vector construct: MMLV RTase

Figure 4. Determination of the optimal amount of template DNA for the expression of MMLV RTase using AccuRapid™ Cell-Free Protein Expression Kit. MMLV RTase was maximally expressed with the AccuRapid™ Cell-Free Protein Expression Kit when 600 ng of pET22b-MMLV RTase was used.
Lane M; AccuLadder™ Protein Size Marker (Broad),
Lane 1; Negative Control (No-DNA),
Lane 2; CAT (Chloramphenicol acetyl transferase),
Lane 3 ~9; pET22b-MMLV RTase (50, 100, 200, 400, 600, 800, 1000 (ng))

 

AccuRapid™ Cell-Free Protein Expression Kit's positive control DNA expression test


Figure 5. AccuRapid™ Cell-Free Protein Expression Kit's Positive control DNA expression test (SDS-PAGE and Coomassie Brilliant Blue staining)
Lane M; AccuLadder™ Protein Size Marker (Low)
Lane 1,3,5,7 ; Negative control (No-DNA)
Lane 2; Bionee's Kit
Lane 4; Company A's kit
Lane 6; Company B's kit
Lane 8; Company C's kit
 

Company A's kit positive control DNA expression test


Figure 6. Company A's kit positive control DNA expression test (SDS-PAGE and Coomassie Brilliant Blue staining)
Lane M; AccuLadder™ Protein Size Marker (Low)
Lane 1,3,5,7 ; Negative control (No-DNA)
Lane 2; Bioneer's Kit
Lane 4; Company B's kit
Lane 6; Company C's kit
Lane 8; Company A's kit

 

Company B's kit positive control DNA expression test


Figure 7. Company B's kit positive control DNA expression test (SDS-PAGE and Coomassie Brilliant Blue staining)
Lane M; AccuLadder™ Protein size marker (Low)
Lane 1,3,5,7; Negative control (No-DNA)
Lane 2; Bioneer's Kit
Lane 4; Company B's kit
Lane 6; Company C's kit
Lane 8; Company A's kit
 


 




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Manual

AccuRapid™ Cell-Free Protein Expression Kit


MSDS

AccuRapid™ Cell-Free Protein Expression Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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AccuPrep® His-tagged Protein Purification Kit


Fast micro scale purification of 6xHis-tagged protein

Bioneer's Ni-NTA magnetic silica resins are silica beads, with an average diameter of 1.29 um and a range of 1~5 um diameter, have Ni-NTA (nickel-nitrilotriacetic acid) covalently bound to their surface.
These Ni-NTA magnetic silica beads exhibit outstanding affinity to His-tagged proteins and feature our SSMB (Spherical-Shaped Magnetic Bead) technology that provides increased surface area (due to the small size of the beads), without the issue of impurity carryover common with magnetic particles that have a rough-surface.
Ni-NTA magnetic agarose beads are supplied as a 10% (v/v) suspension with an average binding capacity of 500 ug protein per ml of suspension for 6xHis-tagged protein.


Features and Benefits

  • Flexible: The protocol may be carried out with a magnet or via centrifugation.
  • Excellent performance: Highly pure proteins are obtained through our exclusive SSMB (Spherical-Shape Magnetic Beads).
  • High purity and High yield: Average binding capacity of 500 μg protein per ml of suspension for 6xHis-tagged protein. Purity that is > 90%.
  • Reproducibility: The only hands-on step is the addition of protein extract, maximizing reproducibility.
  • Fast process: The entire purification is complete in about 30 minutes!
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Application


Figure 1. Comparison of Protein Tyrosine Phosphatase(25 kD) purified using AccuPrep® His-tagged Protein Purification Kit and two market leading competitors' products.
AccuPrep® His-tagged Protein Purification Kit outperformed two competitors' similar products in terms of yield and purity.
Lane M: AccuLadder™ Protein Size Marker (Broad)
Lane 1: Crude extract
Lane 2, 5: Bioneer
Lane 3, 6: Company Q
Lane 4, 7: Company E
Washing: Samples taken after the washing step
Elution: eluted protein samples


Figure 2. Various sized proteins purified using AccuPrep® His-tagged Protein Purification Kit.

Proteins as small as 10 kD and as large as 120 kD can be purified with the AccuPrep® His-tagged Protein Purification Kit.
Lane M: AccuLadder™ Protein Size Marker (Broad)
Lane 1: TLA DNA Polymerase
Lane 2: PTPase #54
Lane 3: PTPase pk6


Figure 3. Concentration comparison of TLA DNA polymerase proteins purified using AccuPrep® His-tagged Protein Purification Kit and two market leading competitors' products.

AccuPrep® His-tagged Protein Purification Kit showed up to 5-times higher concentration than that of the competitors.


Procedure





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Manual

AccuPrep® His-tagged Protein Purification Kit


MSDS

AccuPrep® Ni-NTA binding-washing buffer

AccuPrep® Ni-NTA Elution buffer


Brochure

• AccuPrep® His-tagged Protein Purification Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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ExiProgen™ His-tagged Protein Purification Kit


Fully automatic micro-scale purification of His-tagged protein

ExiProgen™ His-tagged Protein Purification kit is suitable to extract of Histidine-tagged protein from recombinant E. coli, by automatic instrument ExiProgen™.
Ni-NTA Magnetic Silica Resins are silica beads, with an average diameter of 1~5um, that contain magnetic particles and have strongly metal-chelating nitrilotriacetic acid (NTA) groups covalently bound to their surfaces.


Features and Benefits

Automatic purification of His-tagged proteins

Getting highly pure proteins through SSMB(Spherical Shape Magentic Beads)

Reproducible result by minimizing human handling

Finishing whole process within 30 minutes

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Figure 1. Reproducibility test: ExiProgen™ His-tagged Protein Purification Kit provides reproducible results, the first time and every time. Electrophoresis was performed on a vertical gel containing 13% poly-acrylamide.
Lane M: AccuLadder™ Protein Size Marker
Lane 1: crude extract of gram negative cell by sonication
Lane 2-3: unbound protein (replicates)
Lane 4, 5, 6, 7, 8, 9, 10, 11: Purified PTPase #32
- Sample type : Recombinant E.coli cell
- Starting volume : 500 uL
- Elution volume : 250 uL
- Average yield : 200 ug/well
- Average purity : 80%


Figure 2. Flexibility test: Proteins as small as 10 kD and as large as 120 kD have been purified with the ExiProgen™ His-tagged Protein Purification Kit. Electrophoresis of purified diverse size of proteins by ExiProgen™ His-tagged Protein Purification Kit was performed on a vertical gel containing 10% poly-acrylamide.
Lane M: AccuLadder™ Protein Size Marker (Broad)
Lane 1: PTPase #1 (65kD), Lane 2: Polymerase (95kD),
Lane 3: PTPase #11 (36kD), Lane 4: PTPase #37 (18kD),
Lane 5: PTPase #32 (23kD), Lane 6: PTPase #39 (19kD);
- Sample type : Recombinant E.coli cell
- Starting volume : 500 uL
- Elution volume : 250 uL
- Average yield : 200 ug/well
- Average purity : 80%

Procedure






 




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Manual

ExiProgen™ His-tagged protein Purification kit


MSDS

ExiProgen™ His-tagged protein Purification kit


Brochure

ExiProgen™ His-tagged protein Purification kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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Protein Synthesis / DNA RNA Preparation


ExiProgen™



Bioneer’s ExiProgen™ is a breakthrough in synthetic biology allowing for the synthesis and purification of one to 16 proteins per run. DNA, in the form of plasmid or linear PCR product, is added to the system and Bioneer’s coupled transcription/translation E. coli extract then synthesizes the protein. The crude protein extract is further purified, using His-Tag engineered into the proteins. The net result is up to 100 ug of >90% pure Protein in about 6 hours. ExiProgen™ can also purify Nucleic Acids from several sources, making it one of the most versatile systems available.


Features and Benefits

  • Fast Protein production : From DNA to Pure protein in about 6 hours
  • DNA purification : A wide variety of gDNA kits available
  • RNA purification : A wide variety of RNA kits available
  • Affinity protein purification : For couples expression and purification in one system!

Built in Protocols optimized for protein synthesis/purification and the extraction of a wide variety of Nucleic Acid Samples
ExiProgen™ has more contains over 900 protocols, each optimized for protein synthesis/purification and target nucleic acid type and source sample. This optimization enables the user to obtain reproducible results for every run, every day. The instrument software can also be upgraded through the network connection port so you can stay up-to-date with the best performing protocols
Cooling Block
ExiProgen™ Has a built-in cooling block where the elution tube rack sits.
Sample integrity is ensured by keeping the samples below 10°C.
This allows for overnight runs and provides you with confidence in your results
Magnetic block & Heating block
To increase extraction efficiency, the ExiProgen™ has an integrated combined magnetic/heating block. The combination of bead magnetization and sample heating reduces experiment time and increases elution efficiency, resulting in increased sample yield. The heating block’s precision temperature control also ensures reproducible results for protein synthesis reactions
Contamination Shield
ExiProgen™ comes with a contamination shield designed to protect the assay from cross-contamination during instrument operation. Any time the pipette tips are moving, the contamination shield will slide under the tips, therefore eliminating the possibility of intra-assay cross-contamination which is a must when working with multiple samples
Easy to use with touch screen
The 3.5" touchscreen maximizes efficiency by offering an intuitive interface with simple push-button operation for processes such as selecting protocols and controlling the UV sterilization lamp.
UV lamp
ExiProgen™ has a powerful UV sterilization lamp that enables the user to sterilize the instrument chamber before and/or after every nucleic acid extraction or protein purification run. This prevents possible inter-assay cross-contamination that may occur on a busy work day


Experimental Procedure



Principle of protein synthesis and purification

ExiProgen™ Protein Synthesis Kit useds a E. coli extract to effect coupled transcription/translation of input DNA, which can be plasmid, or PCR generated DNA. The protein itself is generated with a His-Tag, which is then purified using the Ni-NTA magnetic bead provided. The result is high yields of protein that is >90% pure.



Nucleic acid extraction principle

ExiProgen™ DNA/ RNA Kits work on the principle of cell lysis, followed by bind, wash elute from silica magnetic beads. High yields of ultrapure DNA or RNA are obtained with OD260 readings of > 1.8 for DNA and 2.0 for RNA.





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Applications

Enzyme engineering, protein evolution, Synthetic biology, Bio-energy R&D, Protein drug R&D, expression screening, functional analysis, assay development and antigen production.


Specifications

Dimensions (W X H X D) 320 mm x 500 mm x 535 mm
Weight 27 kg
Operating temperature range 15 - 30°C
Operating humidity range 20 - 80%, no condensation
Operating system Built-in
User interface 320 x 240 touch screen graphic LCD
Input Voltage 100 - 240 VAC
Frequency 50 / 60 Hz
UV sterilization 5-minute cycle, 48.96 mJ/cm energy max 2
Communications TCP/IP
Heat block 40 - 95°C
Cooling block 4 - 10°C


Functions

  ExiProgen
DNA/RNA Extraction Yes
Protein Expression Yes
Protein Purification Yes
TFT Touch Screen Yes
Sample Number 16 samples
UV sterilization Yes
Heated magnetic block Yes
Contamination shield Yes
TCP/IP network connection Multiple systems can be daisy-chained together (up to 6)
Cooling system for sample storeage Yes
Automatic dispensing Yes
Power supply 24 VDC, 7.5 A(180 W)


Experimental Data

1. Protein expression and purification
- Amount of input DNA: 6 - 10 ug (purity >1.8)
- Protocol number : 902
- Total prep time : < 6 h
- Yield: ~100 ug


Procedure




SDS-PAGE analysis

Figure 1. GFP protein (His-tagged protein)’s expression/purification with ExiProgen™.
M; AccuLadder™ Protein Size Maker (Low)
E; expression sample
P; purification sample                   
Figure 2. Various His-tagged proteins expressed/purified with ExiProgen™.
M; AccuLadder™ Protein Size Maker (Low)
E; expression sample
P; purification sample                   


2. Total RNA Extraction from Tissue or cultured mammalian cell
- Sample: 15 ㎎ (Rat liver tissue) or 1 X 106 cells (HeLa)
- Protocol number: 202
- Average yield: 25 ug (Rat liver tissue), 10 ug (HeLa)
- Average RQS: > 9.5

* RQS(RNA quality score): he Caliper RQS is a calculated score that rates the quality of RNA samples. The RQS has been validated to correlate well with Agilent’s RIN (RNA Integrity Number) and follows the same 0-10 scale rating. Results comparing RIN to RQS for the same samples run on both LabChip GX and Agilent’s Bioanalyzer 2100 typically show <10% deviation. ( http://www.caliperls.jp/assets/pdf/lcgx/lcgx-AP-402.pdf)


Procedure



Rat total RNA Extracted from tissue

Total RNA from Rat was observed to contain intact rRNA with no evidence of degradation. 
 

Real-Time PCR carried out on Rat Total RNA
Real time RT-PCR was carried out.AccuPower® RocketScrpt™ RT PreMix(K-2101, Bioneer), and AccuPower® DualStar™ qPCR PreMix(K-6110, Bioneer) , and the Exicycler™ 96 Real-Time PCR system (A-2060).     


Analysis of total RNA from HeLa cells.

Total RNA was extracted from HeLa cell (1 X 106 cells) and analyzed using the LabChip GX (Caliper Life Science).
Each subunit of rRNA is clearly seen with no detectable degradation . In addition, the average yield of Total RNA was 10 ug, and the average RQS was 9.5 or higher.


Real-Time PCR carried out on total RNA from Hela cells.

Real time RT-PCR was carried out on total RNA extracted from HeLa cell (1 X 106 cells) using AccuPower® RocketScrpt™ RT PreMix(K-2101, Bioneer), AccuPower® DualStar™ qPCR PreMix(K-6110, Bioneer) and the Exicycler™ 96 Real-Time PCR system(A-2060)

 

3. Genomic DNA from Cultured mammalian cell (HeLa))
- Sample volume: 1 X 106 cells
- Protocol number: 109
- Total prep time: < 1hr
- Average yield: 4-8 ug


Procedure



Agarose gel analysisAgarose gel analysis

Lanes 1, 3, 5, 7, 9, 11, 13, 15 were extracted with 1X106 cells of E.coli cells and Lanes 2, 4, 6, 8, 10, 12, 14, 16 were extracted with ddH2O as a negative control in DNA extraction. Note all samples have very similar yields.
Purity was also tested and was consistently between 1.9 and 2.0 (not shown).

 

4. Genomic DNA from Tissue (Bovine skeletal muscle)
- Sample volume: 1 X 106 cells
- Protocol number: 109
- Total prep time: < 1hr
- Average yield: 8-12 ug


Procedure


Agarose gel analysis

Lanes 1, 3, 5, 7, 9, 11, 13, 15 were extracted with 20 mg of bovine tissues and Lanes 2, 4, 6, 8, 10, 12, 14, 16 were extracted with ddH2O as a negative control in DNA extraction. Note all samples have very similar yields.
Purity was also tested and was consistently between 1.9 and 2.0 (not shown).

 

5. Genomic DNA from Plant Tissue (Spinach leaf)
- Sample volume: 100 ㎎
- Protocol number: 104
- Total prep time: <1 hr
- Average yield: 3-5 ug


Procedure



Agarose gel analysis

Lanes 1, 3, 5, 7, 9, 11, 13, 15 were extracted with 100 mg of spinach leaves and Lanes 2, 4, 6, 8, 10, 12, 14, 16 were extracted with ddH2O as a negative control in DNA extraction. Note all samples have very similar yields.
Purity was also tested and was consistently between 1.9 and 2.0 (not shown).Lanes 1, 3, 5, 7, 9, 11, 13, 15 were extracted with 100 mg of spinach leaves and Lanes 2, 4, 6, 8, 10, 12, 14, 16 were extracted with ddH2O as a negative control in DNA extraction. Note all samples have very similar yields.
Purity was also tested and was consistently between 1.9 and 2.0 (not shown).

 

 




 

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Application Note

Protein Synthesis

ExiProgen™_Application_Fluorescent proteins

ExiProgen™_Application_High molecular weight protein

ExiProgen™_Application_in vivo protein expression pET vectors


Manual

ExiProgen™


Brochure

ExiProgen™


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

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Real-Time PCR


Exicycler™ 96


Superior 5-color Real-Time Quantitative PCR system

    
Exicycler™ 96 is a superior 96-well PCR system designed for real-time qPCR applications demanding the highest performance. Proprietary Light Tunnel (LT) Technology mitigates the common problem of uneven light distribution across the 96-well plate, allowing for normalization of fluorescence signals from all five channels without the use of a reference dye. The instrument is also equipped with a thermal gradient function, allowing for convenient PCR condition optimization experiments. The analysis software contains several different modules for analyzing qPCR data including: Absolute Quantification, Relative Quantification, SNP genotyping, Existence/Nonexistence and melting curve analysis. With the various modules analyses such as viral load monitoring, gene expression analysis, SNP genotyping etc. can be performed. In vitro diagnostic software packages have also been developed (KFDA, CE-IVD certified versions), which allows the instrument to be used for molecular diagnostic purposes.

Applications

Viral load
Pathogen Detection
Oncology
Genetic disease detection
Drug resistance analysis
DNA methylation study
SNP (Single nucleotide polymorphism) Detection
Quantification of Gene Expression


Benefits

Even illumination with LT (Light Tunnel)Technology
LT delivers accurate and precise results without the need for a reference dye.

Real 5-color multiplexing
Five band-pass filters each for excitation and emission are included for multiplexing, and since no reference dyes are necessary, true five-color multiplexing is possible.

Real-time analysis
Use the Melting curve analysis module to measure the melting points of amplicons in real-time.

Fast and accurate analysis
The high-performance 2D CCD sensor collects information from all 96 wells simultaneously, removing any detection-lag deviations and producing accurate results.

Temperature Gradient function
Enabling the temperature gradient function allows a 1~20°C temperature gradient across the plate within 40~75°C, making it easy to find the optimal annealing temperature.

Touch Down PCR
Time increments and temperature increment controls allow for touch-down PCR applications.

Use various fluorescent dyes
The light source provides even excitation from 480 to 680 nm, allowing the use of various fluorescent dyes.

Wide, linear dynamic range
The dynamic range of detection is wide at over 109.

Intuitive and convenient software
A user-centric GUI lets users design and analyze experiments with ease.


Features

LT technology optics to remove well-to-well variation
To eliminate the well-to-well light intensity variation associated with other systems, Bioneer has designed proprietary, patented optics: Light Tunnel technology.


Minimization of Ct values for maximized reproducibility
By implementing the in-house designed LT technology in the optics module, well-to-well signal variation has been virtually eliminated and reproducibility has been maximized. No matter which well the reaction occurs, the Ct values will be within 0.5.



True 5-Color Multiplexing
Instruments with uneven excitation illumination must use a separate reference dye to normalize signal differences between wells, thus eliminating the usefulness of one fluorescence channel. Exicycler™ 96 does not need a reference dye, freeing all five channels for true 5 color multiplexing. The optics are designed to minimize dye interference, and long-wavelength dyes such as Cy5 can also be used thanks to the short-arc lamp light source, which emits even illumination throughout the visible spectrum. Filter sets for the most popular dyes are pre-installed, so you don’t need to worry about installing more filters.


 

Simultaneous well measurement
The 2D CCD sensor measures all 96 wells simultaneously, eliminating detection lag between wells. Instruments that scan each well or by column have the inherent disadvantage of letting the reaction proceed while measuring, thus producing the undesirable effect of detection lag.

High performance light source
The high performance short-arc lamp used in the optical module emits a brighter light compared to halogen lamps commonly used in comparable instruments. Brighter excitation means better sensitivity, and the inherent long life and light stability enable various wavelengths to be used for experiments.

Self diagnostics
The software performs instrument diagnostics before each experiment, preventing run errors from occurring before the experiment and thus saving valuable samples and reagents from going to waste.

Automatic Door Open/Close function
The loading door is motorized for automatic door opening and closing, adding convenience and flexibility, as the instrument can easily be incorporated into an automated workflow.

Thermal Gradient function
The thermal gradient function allows for rapid cycle condition optimization, increasing the convenience.


Intuitive and full-featured software
A user-friendly interface provides convenience in all steps of the qPCR process including protocol setup, data analysis and result storage. Data analysis modules including Absolute Quantification, Relative Quantification, Existence /Nonexistence, SNP Genotyping and melting curve analysis are included standard for flexibility in data analysis.


Experimental Results
 

1) Viral load testing (Absolute Quantification) 2) Gene expression (Relative Quantification)
By inter olating the Ct value of samples on the standard curve,
the actual quantities in amples are measured.
The relative expression levels of a target gene are compared
among different samples.
3) Pathogen detection (Existence/Nonexistence) 4) Mutation detection and personalized medicine
(SNP Genotyping)
The existence and nonexistence of pathogenic viruses in samples are determined. Two types of homozygote and the heterozygote are determined for a SNP site.
5) Melting curve analysis  
 
Simple dissociation curve data collection and viewing        

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Specifications

Physical specifications
Dimension (mm) 355 (W) x 540 (H) x 470 (D)
Weight (kg) 30 kg
Sample capacity / size 96 well plate / 0.2 ml tubes
Sample volume 20 ~ 100 µl (50 µl recommended)
Power consumption 100 ~ 240 VAC, 50/60 Hz, 850 Watts
Operating temperature 15 ~ 30 °C
Operating humidity 20 ~ 80%, no condensation
Thermo module specifications
Method Heating / Cooling Peltier
Temperature range 4.0°C ~ 99.9°C
Max ramp rate 2.5°C/sec
Temperature accuracy ± 0.3°C
Temperature uniformity ± 0.5°C
Lid temperature 90 ~ 120°C
Temperature increment range 0.1°C ~ 9.9°C
Time increment range 1 sec ~ 60 sec
Gradient range 1°C ~ 20°C
Computer specifications
Operating system Windows XP & Window7 (32-bit OS only, S/W version 3.54.4 or later)
Processor speed Intel Dual Core E2160 (1.8GHz) or higher
Memory 1GB or higher
Communication port USB 2.0 high speed
Screen resolution 1280X1024 or higher
Optical specifications
Light source Short arc lamp (120W)
Lamp life time 3,000 hrs
Sensor 16-Bit 2D CCD
Excitation Filter / Emission Filter 5 Sets
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Manual

Exicycler™ 96


Brochure

Exicycler™ 96


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485: 2003 - certificate

EC Directive 98/79/EC - certificate

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Centrifuge



ExiSpin™ has the functions of a vortexer as well as a microcentrifuge and will significantly save your time in the lab. ExiSpin™ comes complete with rotor for 4 x 8-strip tubes and 12 x 1.5/2.0 ml tubes. Use it for Minipreps, to resuspend oligos, set up your PCR reaction, or any task that requires vortexing in micro test tube or 0.2 ml PCR tubes.

Once you try the ExiSpin™, you will find it an essential instrument for your laboratory.
Contact your local sales representative for a demo today.
 




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ExiSpin™


Compact and convenient benchtop centrifuge combined with a powerful vortexer

ExiSpin™ has the functions of a vortexer as well as a microcentrifuge and will significantly save your time in the lab. ExiSpin™ comes complete with rotor for 4 x 8-strip tubes and 12 x 1.5/2.0 ml tubes. Use it for Minipreps, to resuspend oligos, set up your PCR reaction, or any task that requires vortexing in micro test tube or 0.2 ml PCR tubes.

Once you try the ExiSpin™, you will find it an essential instrument for your laboratory.
Contact your local sales representative for a demo today.

Features and Benefits

  • Full speed vortex and centrifuge: No need to vortex by hand and load a centrifuge to spin down
  • Programmable: Flexible programming ensures reproducible mixing
  • Economical: For less than the cost of a Vortexer, you get a Centrifuge too!

Fully Automated Spin-Mix-Spin Technology
The time and strength of centrifugation/mixing is fully programmable. The numbers of spin-mix-spin cycles can be set (1-999). After this input, a single button automatically starts the process as follows:
1. 1st spin: Spin down samples to a bottom of tube
2. Vortexing of samples
3. 2nd spin: Spin down mixed samples to a bottom of tube

Convenience and High Reproducibility
It provides reproducible results using protocols optimized to samples by preventing the possibilities of experimental errors. Four 8-strips tubes can be handled simultaneously, which enable 32 PCR/QPCR mixture tubes ready to run at once. Twelve 1.5 ml tubes can be loaded for simultaneous cell lysis and subsequent centrifuge-down. The programmed speed and time quarantine the reproducibility of each application.

Economical and Efficient
ExiSpin™ has both a centrifuge and vortex function. You can save not only your time but also the budget by purchasing one instead of two separate instruments. 12 x 1.5 ml rotor and 4 x 8-strip rotor (Figure. 1) are easily changed and both rotors are included in the basic system


Figure 1. Presented rotors for 8-strip PCR tube [left] and 1.5 ml microtube [right]




 


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Applications

• Bacterial Cell lysis
• Mixing with sample and PCR/qPCR PreMix
• Restriction digest, kinase reactions, ligation reaction
• Experiment that need to repetitive mixing and spin-down


Specifications

Dimensions (W X H X D) 190cm(W) x 23.5cm(H) x 12.5cm(D)
Weight 2.7 kg
Spin regulation 1000 – 3500rpm (increment 100rpm)
Spin timer 1 sec – 30 min
Vortexing strength Soft, Medium, Hard
SVS-cycle regulation 1–999 cycles
Power supply AC 24V, 1250mA


Notice to Purchaser

Trademark: ExiSpin™ is a trademark of Bioneer Corporation.

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Manual

ExiSpin™ User manual


Brochure

ExiSpin™


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

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DNA Size Markers


Protein Size Markers


10 bp DNA Ladder


10 bp DNA Ladder is designed for determining the size of double stranded DNA from 10 to 100 bp

10 bp DNA Ladder is designed for determining the size of double stranded DNA from 10 to 100 bp. The ladder consists of 10 double stranded DNA fragments ranging in size from 10 to 100 bp in 10 bp increments, The DNA marker fragments at 40bp bands are two times brighter for easy identification.


Note

The DNA ladder can be applied directly onto an agarose gel. There is no need to heat before loading.
Repeated freezing and thawing should be avoided.


Features and Benefits

  • Complete and ready to load: Convenient
  • Easy-to-Identify reference bands: Easy-to-read results
  • Competitive pricing: Great value for your research dollar
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Specifications

    
Concentration 522 ng/uL
Recommended loading 1.5 ~ 2.0 uL/ 5mm lane width
Size Range (bp) 10 ~ 100
Number of Bands 10
Supplied in 10 mM Tris-HCl (pH 8.0), 1mM EDTA, 5% Ficoll, 0.012% Bromophenol Blue,
0.01%Xylene Cyanol, 0.08% Orange G
Storage -20°C



Application

       Figure 1. Bioneer’s 10 bp DNA ladder shows distinguishable and high resolution band than company P 10bp ladder (Gel running time: 60 min).
Lane A: bioneer 10bp DNA ladder (cat No. D-1010)
Lane B: Company P 10bp ladder



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Manual

• 10 bp DNA Ladder


MSDS

10 bp DNA Ladder


Brochure

DNA Ladders and Makers


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

25/100 bp Mixed DNA Ladder


Ready-to-load 25/100 bp Mixed DNA Ladder ranging from 25 to 2,000 bp. Wide range of DNA Ladders and Molecular Weight Markers

25/100 bp Mixed DNA Ladder is designed for determining the size of double stranded DNA from 25 to 2,000 bp. The ladder consists of 17 double stranded DNA fragments ranging in size from 25 to 200 bp in 25 bp increments, from 200 to 1,000 bp in 100 bp increments, and an additional fragment of 2,000 bp. The DNA marker fragments at 150, 500, 1,000 and 2,000 bp bands are two times brighter for easy identification.


Note

The DNA ladder can be applied directly onto an agarose gel. There is no need to heat before loading. Repeated freezing and thawing should be avoided.


Features and Benefits

  • Complete and ready to load: Convenient
  • Easy-to-Identify reference bands: Easy-to-read results
  • Competitive pricing: Great value for your research dollar
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Specifications

Concentration: 150 ng/μl
Recommended loading: 2.0 μl / 5 mm lane width
Typical Number of lanes: 125 (5 mm lane width)
Size range (bp): 25 - 2,000
Number of bands: 17
Supplied in: 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 2.5% Ficoll, 0.005% Bromphenol Blue, 0.005% Xylene Cyanol
Storage: -20°C



2.5% TBE agarose gel stained with Ethidium Bromide.


Nuclease Activity Test


Lane 1, 2, 3, 4: 25/100 bp Mixed DNA Ladder was stored at 4°C for 16 hours and volume loaded at 2 μl, 3 μl, 5 μl, and 6 μl.
Lane 5, 6, 7, 8: 25/100 bp Mixed DNA Ladder was stored at 37°C for 16 hours and volume loaded at 2 μl, 3 μl, 5 μl, and 6 μl.
2.5% TBE agarose gel was stained with Ethidium Bromide.               

 

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Manual

25/100 bp Mixed DNA Ladder


MSDS

25/100 bp Mixed DNA Ladder

 

Brochure

DNA Ladders and Makers


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

 

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100 bp DNA Ladder


Ready-to-load 100bp DNA Ladder ranging from 100 to 2,000 bp. Wide range of DNA Ladders and Molecular Weight Markers

100 bp DNA Ladder was designed to determine the size of double stranded DNA fragments from 100 to 2,000 bp. The 100 bp DNA Ladder consists of 13 double stranded molecular weight markers ranging in sizes from 100 to 1,000 bp in 100 bp increments, and additional fragments of 1,200, 1,600, 2,000 bp. The 500, 1,000 and 2,000 bp bands are two times brighter for easy identification.


Note

The DNA ladder can be applied directly onto an agarose gel. There is no need to heat before loading. Repeated freezing and thawing should be avoided.


Features and Benefits

  • Complete and ready to load: Convenient
  • Easy-to-Identify reference bands: Easy-to-read results
  • Competitive pricing: Great value for your research dollar

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Specifications

Concentration: 135 ng/μl
Recommended loading: 2.0 μl / 5 mm lane width
Typical Number of lanes: 125 (5 mm lane width)
Size range (bp): 100 - 2,000
Number of bands: 13
Supplied in: 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 2.5% Ficoll, 0.005% Bromphenol Blue, 0.005% Xylene Cyanol
Storage: -20°C



2.0% TAE agarose gel stained with Ethidium Bromide.

 


Nuclease Activity Test


Lane 1, 2, 3: 100 bp DNA Ladder was stored at 4°C for 16 hours and volume loaded at 2 μl, 3 μl, and 5 μl.
Lane 4, 5, 6: 100 bp DNA Ladder was stored at 37°C for 16 hours and volume loaded at 2 μl, 3 μl, and 5 μl.
2.0% TAE agarose gel was stained with Ethidium Bromide.


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Manual

100 bp DNA Ladder


MSDS

100 bp DNA Ladders

 

Brochure

DNA Ladders and Makers

 

Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

100 bp Plus DNA Ladder


Ready-to-load 100 bp Plus DNA Ladder ranging from 100 to 10,200 bp.
Wide range of DNA Ladders and Molecular Weight Markers


100 bp Plus DNA Ladder was designed to determine the size of double stranded DNA fragments from 100 to 10,200 bp. The 100 bp Plus DNA Ladder consists of 19 double stranded molecular weight markers, ranging in size from 100 to 1,000 bp in 100 bp increments, and additional fragments of 1,200, 1,600, 2,000, 2,961, 4,000, 5,007, 5,991, 8,000, 10,200 bp. The 200, 1,000 and 2,000 bp bands are two times brighter for easy identification.


Note

The DNA ladder can be applied directly onto an agarose gel. There is no need to heat before loading. Repeated freezing and thawing should be avoided.


Features and Benefits

  • Complete and ready to load: Convenient
  • Easy-to-Identify reference bands: Easy-to-read results
  • Competitive pricing: Great value for your research dollar

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Specifications

Concentration : 80.7 ng/μl
Recommended loading: 4.0 μl / 5 mm lane width
Typical Number of lanes: 125 (5 mm lane width)
Size range (bp): 100 - 10,200
Number of bands: 19
Supplied in: 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 2.5% Ficoll, 0.005% Bromphenol Blue, 0.005% Xylene Cyanol
Storage: -20°C


1.0% TBE agarose gel stained with Ethidium Bromide.



Nuclease Activity Test


Lane 1, 2, 3: 100 bp Plus DNA Ladder was stored at 4°C for 16 hours and volume loaded at 2 μl, 3 μl, and 5 μl.
Lane 4, 5, 6: 100 bp Plus DNA Ladder was stored at 37°C for 16 hours and volume loaded at 2 μl, 3 μl, and 5 μl.
1.0% TBE agarose gel was stained with Ethidium Bromide.



 

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Manual

100 bp Plus DNA Ladder


MSDS

100 bp Plus DNA Ladder

 

Brochure

DNA Ladders and Makers

 

Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

1 kb DNA Ladder


Ready-to-load 1 kb DNA Ladder ranging from 500 to 10,000 bp.
Wide range of DNA Ladders and Molecular Weight Markers


1 kb DNA Ladder is designed for determining the size of double stranded DNA ranging between 500 to 10,000 bp. The 1 kb Ladder consists of DNA fragments 0.5, 1.0, 1.6, 2.0, 3 (2.961), 4, 5 (5.007), 6 (5.991), 8 and 10 (10.2) kb. The 2.961 kb band is approximately two times brighter for easy identification.


Note

The DNA ladder can be applied directly onto an agarose gel. There is no need to heat before loading. Repeated freezing and thawing should be avoided.


Features and Benefits

  • Complete and ready to load: Convenient
  • Easy-to-Identify reference bands: Easy-to-read results
  • Competitive pricing: Great value for your research dollar


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Specifications

Concentration: 130 ng/μl
Recommended loading: 2.0 μl / 5 mm lane width
Typical Number of lanes: 250 (5 mm lane width)
Size range (bp): 500 - 10,200
Number of bands: 10
Supplied in: 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 2.5% Ficoll, 0.005% Bromphenol Blue, 0.005% Xylene Cyanol
Storage: -20°C



1.0% TAE agarose gel stained with Ethidium Bromide.



Nuclease Activity Test


Lane 1, 2, 3: 1 kb DNA Ladder was stored at 4°C for 16 hours and volume loaded at 2 μl, 3 μl, and 5 μl.
Lane 4, 5, 6: 1 kb DNA Ladder was stored at 37°C for 16 hours and volume loaded at 2 μl, 3 μl, and 5 μl.
1.0% TAE agarose gel was stained with Ethidium Bromide.


 

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Manual

1 kb DNA Ladder


MSDS

1 kb DNA Ladder
 

Brochure

DNA Ladders and Makers


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

Lambda DNA / EcoRI Marker


Ready-to-load Lambda DNA/EcoR I DNA Marker ranging from 3,530 to 21,226 bp. Wide range of DNA Ladders and Molecular Weight Markers

Lambda DNA/EcoR I Marker is created by digesting lambda DNA with the restriction enzyme EcoR I. The resulting DNA ladder is then purified and buffer and dye are added so the DNA marker is ready to load. Lambda DNA/EcoR I Marker consist of 6 double stranded lambda DNA fragments ranging in size from 3,530 to 21,226 bp.

 

Note

The DNA marker can be applied directly onto an agarose gel.
The cohesive ends (indicated by an * in the picture above) of the 12 nt cos site of bacteriophage lambda may anneal and form an additional band. These fragments can be separated by heating at 60 - 65°C for 5 minutes and then cooling on ice for 3 minutes.




Features and Benefits

  • Complete and ready to load: Convenient
  • Uniform sample concentrations: Can be used for sample quantitation
  • Competitive pricing: Great value for your research dollar

 


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Specifications

Concentration: 0.2 ug/μl
Recommended loading: 2.5 μl / 5 mm lane width
Typical Number of lanes: 200 (5 mm lane width)
Size range (bp): 3,530 - 21,226
Number of bands: 6
Supplied in: 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 2.5% Ficoll, 0.005% Bromphenol Blue, 0.005% Xylene Cyanol
Storage: -20°C



0.7% TAE agarose gel stained with Ethidium Bromide.





 

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Manual

• Lambda EcoR I Markers
 

MSDS

Lambda EcoR I Markers


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate


 

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Lambda DNA / Hind III Marker


Ready-to-load Lambda DNA/Hind III DNA Marker ranging from 125 to 23,130 bp.
Wide range of DNA Ladders and Molecular Weight Markers


Lambda DNA/Hind III DNA Marker is generated by digesting lambda DNA with restriction enzyme Hind III. The resulting DNA Ladder is then purified, and buffer and dye are added so the marker is ready to load. Lambda DNA/Hind III Marker consist of 8 double stranded Lambda DNA fragments ranging in size from 125 to 21,226 bp, making it an ideal molecular weight marker for daily use.


Note

The DNA marker can be applied directly onto an agarose gel.
The cohesive ends (indicated by an * in the picture above) of the 12 nt cos site of bacteriophage lambda may anneal and form an additional band. These fragments can be separated by heating at 60 - 65°C for 5 minutes and then cooling on ice for 3 minutes.


Features and Benefits

  • Complete and ready to load: Convenient
  • Uniform sample concentrations: Can be used for sample quantitation
  • Competitive pricing: Great value for your research dollar

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Specifications

Concentration: 0.2 ug/μl
Recommended loading: 2.5 μl / 5 mm lane width
Typical Number of lanes: 200 (5 mm lane width)
Size range (bp): 125 - 23,130
Number of bands: 8
Supplied in: 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 2.5% Ficoll, 0.005% Bromphenol Blue, 0.005% Xylene Cyanol
Storage: -20°C



0.7% TAE agarose gel stained with Ethidium Bromide.


 

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Manual

• Lambda DNA/Hind III Markers


MSDS

Lambda DNA/Hind III Marker


Brochure

DNA Ladders and Makers


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate


 

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Lambda DNA / EcoR I + Hind III Marker


Ready-to-load Lambda DNA/EcoR I + Hind III Marker ranging from 125 to 21,226 bp. Wide range of DNA Ladders and Molecular Weight Markers

Lambda DNA/EcoR I + Hind III DNA Marker is generated by digesting lambda DNA with two restriction enzymes EcoR I and Hind III. The resulting DNA Ladder is then purified and buffer and dye are added so the marker is ready to load. Lambda DNA/EcoR I + Hind III Marker consist of 13 double stranded Lambda DNA fragments ranging in size from 125 to 21,226 bp, making it an ideal molecular weight marker for daily use.


Note

The DNA marker can be applied directly onto an agarose gel.
The cohesive ends (indicated by an * in the picture above) of the 12 nt cos site of bacteriophage lambda may anneal and form an additional band. These fragments can be separated by heating at 60 - 65°C for 5 minutes and then cooling on ice for 3 minutes.


Features and Benefits

 

  • Complete and ready to load: Convenient
  • Uniform sample concentrations: Can be used for sample quantitation
  • Competitive pricing: Great value for your research dollar
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Specifications

Concentration: 0.2 ug/μl
Recommended loading: 2.5 μl / 5 mm lane width
Typical Number of lanes: 200 (5 mm lane width)
Size range (bp): 125 - 21,226
Number of bands: 13
Supplied in: 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 2.5% Ficoll, 0.005% Bromphenol Blue, 0.005% Xylene Cyanol
Storage: -20°C



0.7% TAE agarose gel stained with Ethidium Bromide.
 

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Manual

• Lambda DNA/EcoR I+Hind III Marker


MSDS

Lambda DNA/EcoR I+Hind III Marker


Brochure

DNA Ladders and Makers


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

AccuLadder™ 100 bp DNA ladder


More Sharp! High Resolution! More Convenience!

AccuLadder 100 bp DNA size marker was designed to determine the size of double stranded DNA fragments from 100 to 2,000 bp. AccuLadder is shaper and brighter than our standard 100bp ladder The AccuLadder 100 bp DNA size marker consists of 13 double stranded molecular weight markers ranging in sizes from 100 to 1,000 bp in 100 bp increments, and additional fragments of 1,200, 1,600, 2,000 bp. The 500, 1,000 and 2,000 bp bands are two times brighter for easy identification.


Note

The DNA ladder can be applied directly onto an agarose gel.
There is no need to heat before loading. Repeated freezing and thawing should be avoided.


Features and Benefits

  • Complete and ready to load: Convenient
  • Easy-to-Identify reference bands: Easy-to-read results
  • Competitive pricing: Great value for your research dollar
 ]]>
Specifications

Concentration: 54 ng/μl
Recommended loading: 4.0~5.0 μl / 5 mm lane width
Typical Number of lanes: 126~157 (5 mm lane width)
Size range (bp): 100 - 2,000
Number of bands: 13
Supplied in: 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 2.5% Ficoll, 0.005% Bromphenol Blue, 0.005% Xylene Cyanol
Storage: -20°C



2.0% TBE agarose gel stained with Ethidium Bromide.



Nuclease Activity Test





 

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Manual

• AccuLadder 100bp DNA size marker


MSDS

AccuLadder 100bp DNA size markers


Brochure

DNA Ladders and Makers


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

AccuLadder™ 1 Kb DNA ladder


More Sharp! High Resolution! More Convenience!

AccuLadder 1Kb DNA size marker was designed for determining the size of double stranded DNA ranging between 500 to 10,200 bp. Acculadder is sharper and brighter than our standard 1Kb ladder. The Acculadder 1 kb DNA size marker consists of DNA fragments 0.5, 1.0, 1.6, 2.0, 3 (2.961), 4, 5 (5.007), 6 (5.991), 8 and 10 (10.2) kb. The 2.961 kb band is approximately two times brighter for easy identification.


Note

The DNA ladder can be applied directly onto an agarose gel.
There is no need to heat before loading. Repeated freezing and thawing should be avoided.


Features and Benefits

  • Complete and ready to load: Convenient
  • Easy-to-Identify reference bands: Easy-to-read results
  • Competitive pricing: Great value for your research dollar

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Specifications

Concentration: 65 ng/μl
Recommended loading: 4.0~5.0 μl / 5 mm lane width
Typical Number of lanes: 200~250 (5 mm lane width)
Size range (bp): 500 - 10,200
Number of bands: 10
Supplied in: 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 2.5% Ficoll, 0.005% Bromphenol Blue, 0.005% Xylene Cyanol
Storage: -20°C


1.0% TAE agarose gel stained with Ethidium Bromide.



Nuclease Activity Test

 




 

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Manual

AccuLadder 1kb DNA size marker


MSDS

AccuLadder 1kb DNA size marker


Brochure

DNA Ladders and Makers


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

]]>

AccuLadder™ Protein size marker(Broad)


This Protein size marker contains sample buffer, and it can be loading directly after heating at 95°C for 5 minutes.

AccuLadder™ Protein Size Marker (Broad) consist of 8 kinds of proteins (6.5kDa ~ 116kDa).
This Protein size marker contains sample buffer, and it can be loading directly after heating at 95°C for 5 minutes. 5ul of marker is loaded per lane of SDS-PAGE minigel. In this case, this marker is loaded for 100 lanes.


Features and Benefits

  • Concentration: 0.1mg/mL ~ 0.2mg/mL
  • Recommended loading: 5 ul / lane ( Minigel ; 10x8(cm2), 0.75 or 1.0mm thick )
  • Size Range (kDa): 6.5 ~ 116 (kDa)
  • Number of Bands: 8

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Components

Protein MW (kDa) Source
β-Galactosidase 116 E. coli
Phosphorylase b 97.4 Rabbit muscle
Albumin 66 Bovine serum
Ovalbumin 45 Chicken egg white
Carbonic anhydrase 29 Bovine erythrocytes
Trypsin inhibitor 20.1 Soybean
Lysozyme 14.4 Chicken egg white
Aprotinin 6.5 Bovine lung

Storage conditions

-20°C


 

Notes

The Protein marker can be applied onto a SDS-PAGE gel.
Do heat before loading (95°C, 5min).
Repeated freezing and thawing should be avoided.


 

Experimental Data








 

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Manual

• AccuLadder™ Protein Size Marker (Broad)


MSDS

• AccuLadder™ Protein Size Marker (Broad)


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate

]]>

AccuLadder™ Protein size marker(Low)


This Protein size marker contains sample buffer, and it can be loading directly after heating at 95°C for 5 minutes.

AccuLadder™ Protein Size Marker (Low) consist of 6 kinds of proteins (6.5kDa ~ 66kDa).
This Protein size marker contains sample buffer, and it can be loading directly after heating at 95°C for 5 minutes. 5ul of marker is loaded per lane of SDS-PAGE minigel. In this case, this marker is loaded for 100 lanes.


Features and Benefits

 

  • Concentration: 0.1mg/mL ~ 0.2mg/mL
  • Recommended loading: 5 ul / lane ( Minigel ; 10x8(cm2), 0.75 or 1.0mm thick )
  • Size Range (kDa): 6.5 ~ 66 (kDa)
  • Number of Bands: 6


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Components
Protein MW (kDa) Source
Albumin 66 Bovine serum
Ovalbumin 45 Chicken egg white
Carbonic anhydrase 29 Bovine erythrocytes
Trypsin inhibitor 20.1 Soybean
Lysozyme 14.4 Chicken egg white
Aprotinin 6.5 Bovine lung

Storage conditions

-20°C


Notes

The Protein marker can be applied onto a SDS-PAGE gel.
Do heat before loading (95°C, 5min).
Repeated freezing and thawing should be avoided.




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Manual

• AccuLadder™ Protein Size Marker (Low)


MSDS

• AccuLadder™ Protein Size Marker (Low)


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate

]]>

• AccuTarget™ Genome-wide Predesigned siRNA Library


siRNA Library with over 132,000 predesigned siRNA's from Human, Mouse and Rat, with an 80% siRNA knockdown guarantee

Bioneer offers over 132,000 predesigned siRNAs for more than 44,000 target genes from Human, Mouse and Rat. Search our extensive siRNA library by Gene ID, Symbol, Synonyms, Description, or Accession Number. Once you find your gene of interest, choose your guaranteed yield and purification level, and check your predicted siRNA knockdown efficiency. You can even order your qPCR primers for siRNA knockdown validation. Convenient and easy siRNA ordering - only from Bioneer.


Features and Benefits

  • High siRNA knockdown rates: 2 of three siRNAs suppress target mRNA levels > 80%
  • Unique design algorithm: Maximizes siRNA knockdown while minimizing off target effects
  • Competitive pricing: Great value for your research dollar
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Turbo si-Designer - Bioneer's proprietary siRNA design algorithm

Small interfering RNA (siRNA) has recently emerged as a novel tool in the functional genomics arena of small RNA molecules (siRNA and microRNA). RNA interference is a mechanism of gene silencing at the mRNA level. This phenomenon is triggered by small interfering (si)RNAs and micro (mi)RNAs. These molecules involved in gene regulation belong to an expanding class of small non-coding RNAs. siRNAs are capable of inhibiting gene expression by either directing the degradation of homologous mRNA targets or inducing the repression of translation of mRNA targets.
In 2002, siRNA was hailed by Science magazine as being the "Breakthrough of the year" technology. In RNAi experiments, the most critical design factor is specific target recognition which is critical because the efficiency level of siRNA is different for each site. Silencing the correct gene enables researchers to obtain reproducible experimental results which can lead to the subsequent use of siRNA as a genetic drug. Experimental success depends upon several factors. The most critical among these factors is the design of effective and specific siRNA. Bioneer, in collaboration with the world renowned National Genome Information Center (NGIC) at KRIBB institute, has developed a proprietary siRNA selection algorithm. Turbo si-Designer identifies highly effective siRNA target sites with exceptional success rates. Several important parameters including base composition, the number of repetitive bases in a row, thermodynamic instability, energy profiling and base preference were considered in the development of Turbo si-Designer. The siRNAs spanning SNP sites are removed and non-specific siRNAs are eliminated after BLAST to minimize off-target effects. The resulting candidates are then ranked according to the NGIC scoring system. The performance of the algorithm was evaluated by designing hundreds of siRNAs and testing the siRNA nockdown efficacy by Real-time PCR analysis. Over 80% of the siRNAs tested showed > 75% knockdown of the target mRNA and more than 40% of siRNAs induced > 90% knockdown. Notably, siRNAs with the low NGIC score were mostly nonfunctional, indicating that ineffective siRNAs are efficiently removed by Turbo si-Designer.
To validate the performance efficacy of Turbo si-Designer, Bioneer tested the knockdown efficiency of 82 predesigned siRNAs in anti-apoptosis and cell division related genes (Survivin). The siRNA was transfected into A549 lung carcinoma cells and the knockdown efficiency was then analyzed using QuantiGene ViewRNA Analysis. As seen on the Figure 1B., the lower-scoring siRNAs are not effective compared to the higher-scoring siRNA (Figure 1A.) and thus Turbo si-Designer can predict the higher efficiency siRNA by the exclusion of ineffective siRNA sites (see Figure 1).


Figure 1. siRNA Knockdown efficiency of siRNAs designed by Turbo si-Designer was analyzed by Northern blot and real-time PCR analysis.
A) siRNA Knockdown efficiency of high NGIC score siRNAs.
B) siRNA Knockdown efficiency of low NGIC score siRNAs.

Since all siRNAs are not equally potent and not all silencing is gene specific, Bioneer strongly suggests performing siRNA Knockdown efficiency experiments with at least 3 siRNAs per target gene. Bioneer guarantees 80% siRNA Knockdown efficiency when purchasing 3 siRNAs for the same target gene.

 

The Bioneer Guarantee

When purchasing 3 siRNAs for the same gene, Bioneer guarantees at least an 80% reduction in the target mRNA level for two of the siRNAs. If there is not a > 80% reduction in the mRNA level of the target gene, Bioneer will provide a replacement of 2 siRNAs free of charge. Bioneer reserves the right to request supporting data inclusive of:
1. siRNA Knockdown efficiency data: NC (AccuTarget Negative Control) and siRNA concentration at 100 nM
2. Transfection efficiency data: PC (AccuTarget GAPDH/GFP/Luciferase siRNA) and NC (AccuTarget Fluorescein-labeled Negative Control)



Figure 2. siRNA Knockdown efficiency of AccuTarget Genome-wide Predesigned siRNA. AccuTarget Predesigned siRNAs are highly effective. To determine siRNA Knockdown efficiency of predesigned siRNAs, HeLa cells were transfected with siRNAs at 100 nM concentration. 24 hours post-transfection, total RNA was isolated and the level of target mRNA was measured by qRT-PCR. This data demonstrates the effectiveness of the Turbo si-Designer algorithm: 83.8% of tested siRNAs induced >70% siRNA Knockdown and 38.1% of tested siRNAs elicited >90% knockdown.



Notice to Purchaser

All siRNA Products: For Research Use Only. Not For Use in Diagnostic Procedures.



Limited License

This product is licensed under European Patents 1144623, 121945 and foreign equivalents from Alnylam Pharmaceuticals, Inc., Cambridge, USA and is provided only for use in academic and commercial research whose purpose is to elucidate gene function, including research to validate potential gene products and pathways for drug discovery and development and to screen non-siRNA based compounds (but excluding the evaluation or characterization of this product as the potential basis for a siRNA-based drug) and not for any other commercial purposes. Information about licenses for commercial use (including discovery and development of siRNA-based drugs) is available from Alnylam Pharmaceuticals, Inc., 300 Third Street, Cambridge, MA 02142, USA.

This product is sold for research use only and is not to be administered to humans or used for medical diagnostics. Buyer acknowledges and agrees that all intellectual property rights in the products (including, without limitation, the siRNA sequences used to create such products) and in any Bioneer technology, intellectual property and know-how used to make or useful for the manufacture or use of the products will at all times remain vested in Bioneer (other than any ownership interest that buyer may have in non-public proprietary target genes supplied by buyer to Bioneer in connection with custom products).

Trademark: AccuTarget is a trademark of Bioneer Corporation.





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Manual

siRNA user manual AccuTarget™ Genome-wide Predesigned siRNA library


Brochure

• siRNA Products and services 2010


FAQ

siRNA-FAQ


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

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• AccuTarget™ Predesigned siRNA Sets


siRNA libraries organized by gene family and function. 25 standard siRNA libraries and 21 fully validated siRNA libraries are available

Bioneer offers the AccuTarget™ Human siRNA Library which contains 25,368 predesigned and manufactured siRNAs for immediate use in your experiments. These Premade human siRNA library is available at 10, 20, 50 and 100 nmole guaranteed yield.. We also offer 25 Pathway specific / gene family siRNA library sets for researchers studying cellular processes, cancer, disease etc. These are available at 0.1, 0.25, 0.5 and 1 nmole guaranteed yield. Finally there are 21 pre-validated siRNA libraries with high knockdown rates and demonstrated effectiveness. Validated siRNAs can be ordered at 10, 20, 50 and 100 nmole guaranteed yield.


Features and Benefits

 

  • Categorized by Pathway / family: Convenient format for research
  • Pre-validated siRNA libraries available: Works the first time and every time
  • Competitive pricing: Great value for your research dollar

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Bioneer provides various libraries categorized by gene family and/or pathway. All siRNAs are synthesized in our state-of-the-art clean room facility and then purified free of charge utilizing the company's Bio-RP purification system. Each siRNA is quality controlled by MALDI-TOF mass spectrometry to guarantee highest quality and analyzed by PAGE to confirm its duplex structure. (Figure 1 and 2)



Figure 1. MALDI-TOF mass spectrometry analysis of a custom siRNA. All siRNAs are processed by MALDI-TOF mass spectrometry to ensure its quality.


Figure 2. PAGE data of double-stranded custom siRNA. Complementary single-stranded RNA strands were hybridized to form siRNA duplex and analyzed by 15% non-denaturing PAGE.
SS: single-stranded RNA
DS: double-stranded siRNA               



Figure 3. Knockdown efficiency of AccuTarget™ siRNA Library. To determine the knockdown efficiency, HeLa cells were transfected with individual siRNAs at 100 nM concentration. 24 hours post-transfection, total RNA was isolated and the level of target mRNA was measured by qRT-PCR. This data demonstrates the effectiveness of the Turbo si-Designer algorithm: 83.8% of tested siRNAs induced > 70% knockdown and 38.1% of tested siRNAs elicited > 90% knockdown.



Figure 4. Knockdown efficiency of AccuTarget™ Human Validated Cell Cycle siRNA set. HeLa cells were transfected with individual siRNAs targeting 33 different genes at a concentration of 20 nM. Total RNAs was isolated and the level of target mRNA was measured by qRT-PCR. This data demonstrates the effectiveness of the Turbo si-Designer algorithm.]]>
Manual

siRNA manual


Brochure

siRNA Products and services


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

]]>
siRNA Set

Cat. No. Product Description No. of Genes No. of siRNAs Price
SHS-0010 AccuTarget™ Human Antioxidant siRNA Set 38 114 Inquire
SHS-0020 AccuTarget™ Human Apoptosis siRNA Set 290 870 Inquire
SHS-0250 AccuTarget™ Human Cancer siRNA set 1158 3474 Inquire
SHS-0030 AccuTarget™ Human Caspase siRNA set 37 111 Inquire
SHS-0040 AccuTarget™ Human Cell cycle siRNA Set 112 336 Inquire
SHS-0050 AccuTarget™ Human Cyclase siRNA Set 22 66 Inquire
SHS-0060 AccuTarget™ Human Cytochrome P450 siRNA Set 52 156 Inquire
SHS-0070 AccuTarget™ Human Deaminase siRNA Set 22 66 Inquire
SHS-0080 AccuTarget™ Human GPCR signaling pathway siRNA set 732 2196 Inquire
SHS-0090 AccuTarget™ Human Helicase siRNA Set 115 345 Inquire
SHS-0100 AccuTarget™ Human Isomerase siRNA Set 104 312 Inquire
SHS-0110 AccuTarget™ Human Kinase siRNA Set 700 2100 Inquire
SHS-0120 AccuTarget™ Human Ligase siRNA Set 272 816 Inquire
SHS-0130 AccuTarget™ Human Lyase siRNA Set 123 369 Inquire
SHS-0140 AccuTarget™ Human Motor siRNA Set 122 366 Inquire
SHS-0150 AccuTarget™ Human NF-kB pathway siRNA Set 37 111 Inquire
SHS-0160 AccuTarget™ Human Nucleic acid binding siRNA Set 2589 7767 Inquire
SHS-0170 AccuTarget™ Human Oxidoreductase siRNA Set 551 1653 Inquire
SHS-0180 AccuTarget™ Human Peptidase siRNA Set 495 1485 Inquire
SHS-0190 AccuTarget™ Human Phosphatase siRNA Set 188 564 Inquire
SHS-0200 AccuTarget™ Human Receptor siRNA Set 1526 4578 Inquire
SHS-0210 AccuTarget™ Human Transferase siRNA Set 1431 4293 Inquire
SHS-0220 AccuTarget™ Human Transporter siRNA Set 1023 3069 Inquire
SHS-0230 AccuTarget™ Human Tubulin siRNA Set 20 60 Inquire
SHS-0240 AccuTarget™ Human Ubiquitin siRNA Set 77 231 Inquire

siRNA Subset

Cat. No. Product Description No. of Genes No. of siRNAs Price
SHS-0110-1 AccuTarget™ Human AGC Kinase siRNA Subset 58 174 Inquire
SHS-0110-2 AccuTarget™ Human CAMK Kinase siRNA Subset 65 195 Inquire
SHS-0110-3 AccuTarget™ Human CK Kinase siRNA Subset 11 33 Inquire
SHS-0110-4 AccuTarget™ Human CMGC Kinase siRNA Subset 56 168 Inquire
SHS-0110-5 AccuTarget™ Human Other Kinase siRNA Subset 343 1029 Inquire
SHS-0110-6 AccuTarget™ Human STE Kinase siRNA Subset 43 129 Inquire
SHS-0110-7 AccuTarget™ Human TK Kinase siRNA Subset 84 252 Inquire
SHS-0110-8 AccuTarget™ Human TKL Kinase siRNA Subset 40 120 Inquire
SHS-0190-1 AccuTarget™ Human Other Phosphatase siRNA Subset 147 441 Inquire
SHS-0190-2 AccuTarget™ Human Tyrosine Phosphatase siRNA Subset 41 123 Inquire

siRNA Druggable Set

Cat. No. Product Description No. of Genes No. of siRNAs Price
SHD-00XX AccuTarget™ Human Druggable siRNA library set 8175 24,525 Inquire
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• AccuTarget™ Real-Time PCR Primers Library


Predesigned and validated Real-Time PCR primers for measuring siRNA knockdown results

The AccuTarget™ Human Validated Real-Time PCR Primer Library is comprised of highly specific and sensitive Real-Time primer sets that are bioinformatically designed and validated based on the human genome. The Real-Time PCR Primer Library consists of 11,154 primer sets validated in Real-Time PCR and used to measure siRNA knockdown results


Features and Benefits

 

  • In ready-to-ship format: 11,154 human genes specific primers
  • All Primers pre-validated: QC tested via MALDI-TOF mass spectrometer
  • Competitive pricing: Great value for your research dollar

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AccuTarget™ Human Validated Real-Time PCR Primer Library is comprised of highly specific and sensitive Real-Time primer sets that are bioinformatically designed and validated based on the human genome. The Real-Time PCR Primer Library consists of 11,154 primer sets validated in Real-Time PCR with SYBR Green detection using Exicycler™ 96 and AccuPower GreenStar™ qPCR PreMix. The Library is categorized by gene function and pathway. The Library guarantees the most specific and sensitive Real-Time PCR result when used with AccuPower GreenStar PCR PreMix (Not available in the US).



Figure 1. Real-Time PCR validation test of Human Oxidoreductase using AccuTarget™ Human Oxidoreductase Real-Time PCR Primer Set (A; Amplification curve, B; Melting curve analysis) Real-Time PCR reaction for AccuTarget™ Human Oxidoreductase Real-Time PCR Primer Set was tested using Exicycler 96 Real-Time Quantitative Thermal Block (Cat. No. A-2060) and AccuPower GreenStar PCR PreMix (Cat. No. K-6210). cDNA template was reverse-transcribed from QPCR Human Reference Total RNA 30 ng and reaction condition was 95°C 10 minutes, 1 cycle and 95°C 10 seconds, 58°C 25 seconds, 72°C 30 seconds, 41 cycles.



Figure 2. Real-Time PCR validation test of hHPRT1 and hSLC12A1 genes (A; Amplification curve of hHPRT1, B; Melting curve analysis of hHPRT1, C; Amplification curve of hSLC12A1, D; Melting curve analysis of hSLC12A1) Real-Time PCR for hHPRT1 Primer Set and hSLC12A1 Primer Set were tested using Exicycler 96 Real-Time Quantitative Thermal Block (Cat. No. A-2060) and AccuPower GreenStar PCR PreMix (Cat. No. K-6210). cDNA template was reverse-transcribed from qPCR Human Reference Total RNA 30 ng (60 ng) and reaction condition was 95°C 10 minutes, 1 cycle and 95°C 10 seconds, 58°C 25 seconds, 72°C 30 seconds, 41 cycles.               



Figure 3. Real-Time PCR sensitivity test for detection of hPGK1 (Phosphoglycerate Kinase 1; Housekeeping gene) gene using AccuTarget™ hPGK1 primer set. (A; Amplification curve, B; Standard curve analysis, C; Melting curve analysis, 1; 100 ng QPCR Human Reference Total RNA, 2; 10 ng QPCR Human Reference Total RNA, 3; 1 ng QPCR Human Reference Total RNA, 4; 100 pg QPCR Human Reference Total RNA, 5; 10 pg QPCR Human Reference Total RNA, N; NTC [No Template Control]) Real-Time PCR reaction for hPGK1 primer set was tested using Exicycler 96 Quantitative Real-Time Thermal Block (Cat. No. A-2060), AccuPower GreenStar PCR PreMix (Cat. No. K-6210) and Opticon (BioRad). cDNA template was reverse-transcribed from QPCR Human Reference Total RNA 400ng (serial dilution; 100 ng, 10 ng, 100 pg, 10 pg) and reaction condition was 95°C 10 minutes, 1 cycle and 95°C 10 seconds, 58°C 25 seconds, 72°C 30 seconds, 41 cycles.



Figure 4. Comparison of Real-Time PCR reproducibility test of hPGK1 (Phosphoglycerate Kinase 1; Housekeeping gene) gene detecting primer set from Bioneer and competitors. [A, B & C: AccuTarget™ hPGK1 Primer Set, D, E & F; Competitor Q hPGK1 primer set, A & D; Amplification curve, B & E; Standard curve analysis, C & F: Melting curve analysis, 1; 100 ng QPCR Human Reference Total RNA, 2; 10 ng QPCR Human Reference Total RNA, 3; 1 ng QPCR Human Reference Total RNA, 4; 100 pg QPCR Human Reference Total RNA, 5; 10 pg QPCR Human Reference Total RNA, N; NTC (No Template Control)] Real-Time PCR reaction for hPGK1Primer Set was tested using Opticon (BioRad) and AccuPower GreenStar qPCR PreMix (Cat. No. K-6210). cDNA template was reverse-transcribed from QPCR Human Reference Total RNA 400ng (serial dilution; 100 ng, 10 ng, 100 pg, 10 pg) and reaction condition was 95°C 10 minutes, 1 cycle and 95°C 10 seconds, 58°C 25 seconds, 72°C 30 seconds, 41 cycles.




Figure 5. QC test for AccuTarget™ Validated Real-Time PCR primer Library for Human Quality control of Real-Time PCR primer Library was tested using MALDI-TOF instrument that analyzes oligo mass.











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Mamual

qPCR User Manual


Brochure

siRNA Products and services


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

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• AccuTarget™ Control siRNAs


Positive and Negative control siRNA's for your experiments. > 90% siRNA knockdown for positive controls

The AccuTarget™ Positive Control siRNAs are designed to induce high siRNA knockdown of their target genes. siRNA targeting an endogenous gene (GAPDH) and a reporter system (GFP and Luciferase) are available. AccuTarget™ Negative Control siRNAs do not target any known genes in human, mouse and rat. The negative control siRNA can be fluorescently labeled for easier monitor of transfection efficiency. AccuTarget™ Control siRNA Sets consisting of a positive and negative control siRNAs are also available for user convenience.


Features and Benefits

 

  • Excellent performance: Positive control siRNA knockdown rates > 90%
  • Monitoring of transfection rate: Convenient fluorescently labeled negative control sets
  • Competitive pricing: Great value for your research dollar
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Positive and Negative Control siRNA
         A) Northern Blotting                                                              B) qRT-PCR

Figure 1. Effects of Human GAPDH Positive Control siRNA. HeLa cells were transfected separately with AccuTarget™ Human GAPDH Positive Control and Negative Control siRNA using Lipofectamine 2000 (Invitrogen) at a final concentration of 100 nM. Total cellular RNA was isolated from transfected cells 24 hours after transfection and subjected to Northern blot and Real-Time PCR analysis. As can be seen from Fig. 1-B, about 3% GAPDH mRNA remained.


GFP Control siRNA

Figure 2.
HeLa cells in a 24-well plate were cotransfected with 200 ng of CMV-GFP plasmid and 10 nM of GFP siRNA using lipofectamine 2000 transfection reagent. Next day, the expression of GFP was observed by using a Nikon Eclipse TS100 epifluorescence microscope. In contrast to bright green fluorescence of GFP protein in NC-siRNA-transfected cells, no fluorescence was detected from GFP-siRNA-transfected cells, indicating efficient knockdown of GFP by using our positive control GFP-siRNA.

GFP Control siRNA

Figure 3.
HeLa cells in a 6-well plate were cotransfected with 400 ng of CMV-luc plasmid and 10 nM of luciferase siRNA using lipofectamine 2000 transfection reagent. Next day, cells were harvested and assayed for luciferase activity. As shown in Fig. 3, cotransfection with our positive control luciferase siRNA led to efficient knockdown of luciferase activity (85% - 95% knockdown compared to luciferase activity of NC-siRNA-transfected cells).







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Brochure

• siRNA Products and services 2010


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

]]>

AccuTarget™ Positive Control siRNAs (Human)

Cat. No. Product Description Purification Guaranteed Yield Add to Cart
SP-1001 AccuTarget™ GAPDH Positive Control siRNA BioRP 5 nmole Inquire
SP-1002 AccuTarget™ GAPDH Positive Control siRNA BioRP 10 nmole Inquire
SP-1003 AccuTarget™ GAPDH Positive Control siRNA BioRP 20 nmole Inquire
SP-1011 AccuTarget™ GAPDH Positive Control siRNA HPLC 5 nmole Inquire
SP-1012 AccuTarget™ GAPDH Positive Control siRNA HPLC 10 nmole Inquire
SP-1013 AccuTarget™ GAPDH Positive Control siRNA HPLC 20 nmole Inquire
SP-2001 AccuTarget™ GFP Positive Control siRNA BioRP 5 nmole Inquire
SP-2002 AccuTarget™ GFP Positive Control siRNA BioRP 10 nmole Inquire
SP-2003 AccuTarget™ GFP Positive Control siRNA BioRP 20 nmole Inquire
SP-2011 AccuTarget™ GFP Positive Control siRNA HPLC 5 nmole Inquire
SP-2012 AccuTarget™ GFP Positive Control siRNA HPLC 10 nmole Inquire
SP-2013 AccuTarget™ GFP Positive Control siRNA HPLC 20 nmole Inquire
SP-3001 AccuTarget™ Luciferase Positive Control siRNA BioRP 5 nmole Inquire
SP-3002 AccuTarget™ Luciferase Positive Control siRNA BioRP 10 nmole Inquire
SP-3003 AccuTarget™ Luciferase Positive Control siRNA BioRP 20 nmole Inquire
SP-3011 AccuTarget™ Luciferase Positive Control siRNA HPLC 5 nmole Inquire
SP-3012 AccuTarget™ Luciferase Positive Control siRNA HPLC 10 nmole Inquire
SP-3013 AccuTarget™ Luciferase Positive Control siRNA HPLC 20 nmole Inquire


AccuTarget ™ Negative Control siRNAs (Human, Mouse, Rat)

Cat. No. Product Description Purification Guaranteed Yield Add to Cart
SN-1001 AccuTarget™ Negative Contol siRNA BioRP 5 nmole Inquire
SN-1002 AccuTarget™ Negative Contol siRNA BioRP 10 nmole Inquire
SN-1003 AccuTarget™ Negative Contol siRNA BioRP 20 nmole Inquire
SN-1011 AccuTarget™ Negative Contol siRNA HPLC 5 nmole Inquire
SN-1012 AccuTarget™ Negative Contol siRNA HPLC 10 nmole Inquire
SN-1013 AccuTarget™ Negative Contol siRNA HPLC 20 nmole Inquire
SN-1021 AccuTarget™ Fluorescein-labeled Negative Control siRNA HPLC 5 nmole Inquire
SN-1022 AccuTarget™ Fluorescein-labeled Negative Control siRNA HPLC 10 nmole Inquire
SN-1023 AccuTarget™ Fluorescein-labeled Negative Control siRNA HPLC 20 nmole Inquire

AccuTarget™ Control siRNA Sets

Cat. No. Product Description Purification Guaranteed Yield Add to Cart
SS-1001 AccuTarget™ GAPDH Control siRNA Set BioRP 5 nmole positive control
+ 2 nmole negative control
Inquire
SS-1002 AccuTarget™ GFP Control siRNA Set BioRP 5 nmole positive control
+ 2 nmole negative control
Inquire
SS-1003 AccuTarget™ Luciferase Control siRNA Set BioRP 5 nmole positive control
+ 2 nmole negative control
Inquire
SS-1011 AccuTarget™ GAPDH Control siRNA Set HPLC 5 nmole positive control
+ 2 nmole negative control
Inquire
SS-1012 AccuTarget™ GFP Control siRNA Set HPLC 5 nmole positive control
+ 2 nmole negative control
Inquire
SS-1013 AccuTarget™ Luciferase Control siRNA Set HPLC 5 nmole positive control
+ 2 nmole negative control
Inquire
 
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• AccuTarget™ Custom Designed siRNA Synthesis


Custom siRNA's according to your specs, or let us design them using our software at no extra cost

Bioneer's Custom siRNA synthesis service offers exceptional quality siRNAs to knock down your target genes. Custom siRNAs can be synthesized according to sequence information you provide, or you can take advantage of our complimentary siRNA design service. Up to 30-mer siRNA including a choice of 32 different 3' overhangs can be ordered with a variety of modification options for expanded specificity. siRNA is provided purified, annealed, lyophilized and ready-to-use. For even greater convenience, check out our AccuTarget™ Genome-wide Pre-designed siRNA - siRNAs pre-designed for human (17,842 genes), mouse (17,118 genes) and rat (9,392 genes) synthesized and ready-to-ship.

All custom siRNAs are synthesized in our state-of-the-art clean room facility and then purified free of charge utilizing Bioneer's BioRP purification system. For higher purity, HPLC purification is available at an additional charge. Each siRNA is quality controlled by MALDI-TOF mass spectrometry to guarantee highest quality and analyzed by PAGE to confirm its duplex structure.


Features and Benefits

 

  • Guaranteed performance: Two of three custom siRNA will give 80% siRNA knockdown*
  • Guaranteed Quality: Manufactured in a state-of-the-art clean room and QC’ed by MALDI-TOF and PAGE
  • Custom siRNA design service available: Turbo si-Designer software design is available free of charge**
  • Competitive pricing: Overhang and annealing service provided free of charge, great value for your research dollar

* 80% siRNA knockdown guarantee policy is not applied to custom siRNA design for noncoding RNA by Turbo si-Designer.
** Complimentary siRNA design service is available only when a customer orders the corresponding siRNA(s) from Bioneer.

 

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Discover the Bioneer advantage

Gene silencing by RNA interference (RNAi) technology using small interfering RNA (siRNA) is a powerful tool for studying functional genomics, drug target identification and validation, pathway elucidation, and therapeutic development. The Bioneer advantage is in the algorithm we use for siRNA design. Our Turbo si-Designer software identifies highly effective siRNA target sites with remarkably high siRNA knockdown rates. Critical parameters including base composition, thermodynamic instability and base preference are all considered in the design algorithm. siRNAs spanning SNP sites are removed and finally, non-specific siRNAs are eliminated following homology searching by BLAST and Smith-Waterman algorithms. The result is an siRNA with extraordinary siRNA knockdown efficiency and minimal off-target effects. The performance of Turbo si-Designer has been extensively evaluated by testing the siRNA knockdown efficiency of thousands of siRNAs targeting STE Kinases, TK Kinases, genes involved in the NF-kappaB and Caspase Pathways using Real-time PCR analysis. The results of the evaluation indicated the Bioneer's design algorithm was highly effective in selecting effective siRNAs; 80% of the tested siRNAs showed > 70% knockdown and 38% elicited knockdown of > 90%.



Figure 1.
siRNA knockdown efficiency of AccuTarget™ Genome-wide Predesigned siRNAs. HeLa cells were transfected with siRNAs at 100 nM.
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Brochure

• siRNA Products and services 2010


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

 

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Cat. No. Guaranteed Yield Purification Price S-1017-1 10 nmole BioRP $180.00 S-1017-2 20 nmole $230.00 S-1017-3 50 nmole $350.00 S-1017-4 100 nmole $410.00 S-1018-1 10 nmole HPLC $300.00 S-1018-2 20 nmole $410.00 S-1018-3 50 nmole $500.00 S-1018-4 100 nmole $540.00
- siRNA provided lyophilized and annealed.
- Annealing buffer is provided when single-stranded siRNA requested.


Modification 10 nmole 20 nmole 50 nmole 100 nmole
5' Fluorescein $80.00 $90.00 $120.00 $170.00
5' Phosphorylation $50.00 $60.00 $75.00 $120.00
5' Biotin $80.00 $90.00 $120.00 $170.00
5' Amine $50.00 $60.00 $75.00 $120.00
5' TAMRA $180.00 $220.00 $260.00 $340.00
5'-Cy3 $230.00 $290.00 $340.00 $440.00
5'-Cy5 $230.00 $290.00 $340.00 $440.00
5' Thiol $100.00 $120.00 $150.00 $210.00
5' PEG 2000 $450.00 $580.00 $760.00 $980.00
3' Fluorescein $80.00 $90.00 $120.00 $170.00
3' Phosphorylation $60.00 $70.00 $85.00 $130.00
3' Biotin $130.00 $150.00 $180.00 $250.00
3' Amine $60.00 $70.00 $85.00 $130.00
3' TAMRA $180.00 $220.00 $260.00 $340.00
3' Thiol $100.00 $120.00 $150.00 $210.00
3' DABCYL $180.00 $220.00 $260.00 $340.00
3' Cholesterol $130.00 $150.00 $180.00 $250.00
3' PEG 2000 $450.00 $580.00 $760.00 $980.00
Internal 2'-F(A) $40.00 $50.00 $60.00 $60.00
Internal 2'-F(C) $40.00 $50.00 $60.00 $60.00
Internal 2'-F(G) $40.00 $50.00 $60.00 $60.00
Internal 2'-F(U) $40.00 $50.00 $60.00 $60.00
Internal Phosphorothioate N/A $5.50 $9.00 $12.00
Internal 2'-OMe $12.00 $17.00 $25.00 $35.00
Internal Inosine $25.00 $30.00 $40.00 $50.00
Internal Deoxy-abase $70.00 $90.00 $110.00 $150.00
Chimeric DNA Bases $0.50 $0.80 $1.20 $2.00

- Certain items may not be available in all countries.
- Order Custom siRNA now.


CUSTOM SIRNA SYNTHESIS

Let Bioneer design your siRNA with Turbo si-Designer, or use the form below to create your own. Up to 30-mer siRNA including a choice of up to different modifications can be ordered at each scale (10, 20, 50 and 100 nmol guaranteed yields) at no extra charge. Each siRNA synthesized by Bioneer is purified to near HPLC purity utilizing the company's proprietary BioRP purification system. For higher purity, HPLC is offered at an additional charge. The siRNA is supplied lyophilized and ready-to-use for your convenience.

Each siRNA is quality controlled by MALDI-TOF mass spectrometry to guarantee highest quality and analyzed by PAGE to confirm its duplex structure. Bioneer offers 7 different 5' modifications: Fluorescein, Phosphorylation, Biotin, Amine, TAMRA, Thiol and PEG 2000. Bioneer also offers 9 different 3' modifications: Fluorescein, Phosphorylation, Biotin, Amine, TAMRA, Thiol, DABCYL, Cholesterol and PEG 2000. 6 internal modifications are also available: DNA, 2'-O-Me, 2'-FU, 2'-FC, Inosine and Deoxy-base. All Bioneer's siRNA products are manufactured in a state-of-the-art clean room.

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• AccuTarget™ Human miRNA mimic & inhibitor Library


AccuTarget™ Human miRNA mimics & inhibitors for studies on miRNA function and gene regulation

Bioneer's AccuTarget™ miRNA mimics are chemically synthesized, double-stranded RNA oligonucleotidess and available for 2,042 Human Mature microRNAs in the miRBase Sequence Database. AccuTarget™ miRNA inhibitors are the single-stranded synthetic inhibitor targeting all human miRNAs in the miRBase Sequence Database. These miRNA mimics & inhibitors are available at 5, 10 and 20 nmole guaranteed yield. We also offer miRNA mimics and inhibitors library sets consisting of predesigned mimics or inhibitors at various small scales (0.25, 0.5, 1, or 2 nmole) in a 96-well plate layout to meet the unique needs of individual customers. . In addition, flexible miRNA library sets for customer- specified mimics & inhibitors are also available for the minimum order of 48 ea.

 

Features and Benefits

Ready-to-transfect miRNA mimics behave like endogenous miRNAs and inhibitors suppress target miRNA activity to study loss-of-function effects after transfection into cells
 

  • Purification: For your more demanding applications, Bioneer's automated HPLC and Bio-RP purification methods ensure high quality, high-throughput miRNA mimics and inhibitors at an affordable price.
  • Affordable pricing: Bioneer provides a variety of high quality miRNA products at an affordable price.
  • Synthesis and QC: Bioneer miRNA mimics and inhibitors are produced in clean room facility by fully automated high-throughput miRNA production system. Bioneer miRNA products are assessed by MALDI-TOF Mass spectrometry analysis. Mass spec data is provided with every miRNA mimic and inhibitor. Additionally, miRNA mimics are tested by gel electrophoresis to verify that both RNA strands annealed properly.

All Bioneer miRNA inhibitors are provided as single-stranded miRNA* (antisense strand of target miRNA) and all Bioneer miRNA mimics are provided as double-stranded siRNA. Each sense siRNA and an antisense siRNA are QC'ed by MALDI-TOF analysis. Every annealed double-stranded miRNA is then QC-tested using PAGE to confirm proper annealing.


AccuTarget™ miRNA mimic controls

We offer AccuTarget™ miRNA mimic controls to optimize assay conditions for miRNA mimic function studies. Both positive and negative controls are provided for miRNA gain-of-function studies using Bioneer's AccuTarget™ miRNA mimics.

AccuTarget™ miRNA housekeeping Positive controls target the 3' UTR (untranslated region) of the standard housekeeping gene, GAPDH, and BIONEER's miRNA mimic Negative controls' sequences are based on common miRNA structure for use as negative experimental controls in human, mouse, and rat cells. The negative controls have been analyzed by BLAST against all human, mouse and rat genomic sequences and miRNA sequences in the current miRBase Database. BIONEER offers two universal negative controls for mimics. In addition, AccuTarget™ miRNA control sets consisting of a Positive and two Negative miRNA controls are also available for user convenience.


Features and Benefits

 

  • Excellent performance: miRNA Houskeeping Positive controls targeting GAPDH with clear read-out of mimic function (knockdown efficiency of >90%) miRNA mimic Negative controls with minimal sequence identity with miRNAs in human, mouse and rat.
  • Monitoring of transfection rate: fluorescently labeled Negative controls for conveniently monitoring cellular uptake and/or transfection efficiency
  • Competitive pricing: Great value for your research dollar

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Introduction

MicroRNA

MicroRNAs (miRNAs) are 21-25 nucleotide(nt)-long single-stranded RNA molecules that serve as a post-transcriptional regulator of gene expression in eukaryotes. The human genome may encode over 1000 miRNAs, which bind with imperfect complementarity to their target mRNAs, generally within the 3’UTR (untranslated region), and repress protein production by destabilizing the mRNA as well as translational suppression. miRNA-mediated translational repression has important roles in wide range of biological process, including development, cell proliferation and differentiation, apoptosis and metabolism [1].
 

MicroRNA Pathway

The biogenesis of miRNAs consists of two sequential processing events. Primary miRNA transcripts (pri-miRNAs), which contain one or multiple stem-loop hairpin structures, are mostly derived from Pol II-mediated transcription. In first step towards the canonical miRNA maturation pathway, pri-miRNA is cleaved by the microprocessor complex, RNase Ⅲ enzyme Drosha, to yield the pre-miRNA, a hairpin-shaped intermediate precursor ~70 nt in length. Pre-miRNAs are then exported from the nucleus to the cytoplasm by Exprotin5, where another RNaseⅢ enzyme Dicer catalyzes the second processing event for miRNA biogenensis and liberates the mature miRNA duplexes. The mature miRNA duplexes consist of the mature miRNA strand and the miRNA* strand, which are derived from two separate arms of the hairpin stem within the miRNA precursor. The miRNA is loaded into an Argonaute-containing RNA-induced silencing complex (RISC), whereas the miRNA* strand is typically degraded. The Ago:miRNA complex then dissociates from RISC loading complex, and become the core of the RISC complex to regulate post-transcriptional gene repression of specific target mRNAs[2].



A recently identified extensive class of small RNAs, called miRNA, has provided new insights in biotechnology. Although they were discovered and recognized relatively recently, miRNAs have been recognized as the most important gene regulators at the post-transcriptional level, and several studies indicated that miRNAs regulate the expression of more than 30 % protein coding genes [3]. The accumulating knowledge about their biogenesis, gene expression regulation mechanism and functions will add a new dimension to our understanding about the complex gene regulatory networks. Recent investigations demonstrate that miRNAs have a unique expression profiles in different cancer types at different stages and play an important role in many disease and viral infections. These results suggest that miRNAs can function as a novel biomarker for disease diagnosis and perform a new strategy for miRNA gene therapy [4].


1. Sci china Ser C-Life Sci, 2009, 52(4):323-330
2. Annu. Rev. Cel. Dev. Biol. 2007. 23:175-205
3. Virchows Arch. 2008. 452:1-10
4. J. Cell. Mol. Med. 2008. 12(1): 3-21

 

Performance of miRNA mimic Positive and Negative controls



Figure1 . AccuTarget™ miRNA Positive & Negative controls were transfected at 20 nM using Lipofectamine™ RNAiMAX into HeLa cell lines and assessed for their ability to decrease target mRNA levels. Down-regulation of GAPDH was determined using the real-time quantitative RT-PCR at 48 hours post-transfection using Bioneer's Exicylcer™ 96 qPCR instrument. 

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Manuals

miRNA mimic and inhibitor user manual


Brochure

siRNA Products and services brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate


 

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AccuTarget™ Custom miRNAs

Cat. No. Product Name Purification Guaranteed Yield Unit Price($)
SMM-001 AccuTarget™ Human miRNA mimic BioRP 5nmole 95.00
SMM-002 AccuTarget™ Human miRNA mimic BioRP 10nmole 140.00
SMM-003 AccuTarget™ Human miRNA mimic BioRP 20nmole 165.00
SMI-001 AccuTarget™ Human miRNA inhibitor BioRP 5nmole 46.00
SMI-002 AccuTarget™ Human miRNA inhibitor BioRP 10nmole 68.00
SMI-003 AccuTarget™ Human miRNA inhibitor BioRP 20nmole 90.00


 

AccuTarget™ library miRNAs

Cat. No. Product Name Purification Guaranteed Yield Unit Price($)
SML-1001 AccuTarget™ Human miRNA mimic BioRP 0.25nmole 26.00
SML-1002 AccuTarget™ Human miRNA mimic BioRP 0.5nmole 33.00
SML-1003 AccuTarget™ Human miRNA mimic BioRP 1nmole 43.00
SML-1004 AccuTarget™ Human miRNA mimic BioRP 2nmole 55.00
SML-2001 AccuTarget™ Human miRNA inhibitor BioRP 0.25nmole 13.00
SML-2002 AccuTarget™ Human miRNA inhibitor BioRP 0.5nmole 17.00
SML-2003 AccuTarget™ Human miRNA inhibitor BioRP 1nmole 22.00
SML-2004 AccuTarget™ Human miRNA inhibitor BioRP 2nmole 28.00

* Flexible miRNA library sets for customer specified mimics & inhibitors are available; minimum order 48ea
** less than 48 ea mimics or inhibitors are considered as the custom miRNA (see above price list).


 

AccuTarget™ Control miRNAs

Cat. No. Product Name Purification Guaranteed Yield Price($)
SMC-1001 AccuTarget™ miRNA Houskeeping Positive control (GAPDH) BioRP 5nmole 76.00
SMC-1002 BioRP 10nmole 144.00
SMC-1003 BioRP 20nmole 190.00
SMC-2001 AccuTarget™ miRNA mimic Negative control #1 BioRP 5nmole 76.00
SMC-2002 BioRP 10nmole 144.00
SMC-2003 BioRP 20nmole 190.00
SMC-3001 AccuTarget™ miRNA mimic Negative control #2 BioRP 5nmole 76.00
SMC-3002 BioRP 10nmole 144.00
SMC-3003 BioRP 20nmole 190.00
SMC-4001 AccuTarget™ Fluorescein-labeled miRNA mimic Negative Control siRNA #1 HPLC 5nmole 168.00
SMC-4002 HPLC 10nmole 258.00
SMC-4003 HPLC 20nmole 345.00
SMC-5001 AccuTarget™ Fluorescein-labeled miRNA mimic Negative Control siRNA #2 HPLC 5nmole 168.00
SMC-5002 HPLC 10nmole 258.00
SMC-5003 HPLC 20nmole 345.00
SMC-2101 AccuTarget™ miRNA inhibitor Negative Control #1 BioRP 5nmole 76.00
SMC-2102 BioRP 10nmole 144.00
SMC-2103 BioRP 20nmole 190.00
SMC-3101 AccuTarget™ miRNA inhibitor Negative Control #2 BioRP 5nmole 76.00
SMC-3102 BioRP 10nmole 144.00
SMC-3103 BioRP 20nmole 190.00
SMC-4101 AccuTarget™ Fluorescein-labeled miRNA inhibitor Negative Control #1 HPLC 5nmole 168.00
SMC-4102 HPLC 10nmole 258.00
SMC-4103 HPLC 20nmole 345.00
SMC-5101 AccuTarget™ Fluorescein-labeled miRNA inhibitor Negative Control #2 HPLC 5nmole 168.00
SMC-5102 HPLC 10nmole 258.00
SMC-5103 HPLC 20nmole 345.00
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RNA Polymerase


ExiProgen™ System


Manual Kits


• AccuTarget™ Real-Time PCR Primers for Predesigned siRNA Sets


Predesigned and validated Real-Time PCR primers for measuring siRNA knockdown results

The AccuTarget™ Human Validated Real-Time PCR Primer Library is comprised of highly specific and sensitive Real-Time primer sets that are bioinformatically designed and validated based on the human genome. The Library consists of 11,154 primer sets validated in Real-Time PCR and is used for measuring siRNA knockdown results


Features and Benefits
 

  • In ready-to-ship format: 11,154 human genes specific primers
  • All Primers pre-validated: QC tested via MALDI-TOF mass spectrometer
  • Competitive pricing: Great value for your research dollar


 


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AccuTarget™ Real-Time PCR Primer Set

Cat. No. Product Description No. of Genes No. of Reactions/gene Add to Cart
TBA AccuTarget™ Human Real-Time PCR Primer Set 11,154 50 Inquire

AccuTarget™ Real-Time PCR Primer Libraries

Cat. No. Product Description No. of Genes No. of Reactions/gene Add to Cart
TBA AccuTarget™ Human Antioxidant Real-Time PCR primer Set 38 50 Inquire
TBA AccuTarget™ Human Apoptosis Real-Time PCR primer Set 277 50 Inquire
TBA AccuTarget™ Human Cancer Real-Time PCR primer Set 1,082 50 Inquire
TBA AccuTarget™ Human Caspase Real-Time PCR primer Set 35 50 Inquire
TBA AccuTarget™ Human Cell cycle Real-Time PCR primer Set 111 50 Inquire
TBA AccuTarget™ Human Cyclase Real-Time PCR primer Set 21 50 Inquire
TBA AccuTarget™ Human Cytochrome P450 Real-Time PCR primer Set 37 50 Inquire
TBA AccuTarget™ Human Deaminase Real-Time PCR primer Set 19 50 Inquire
TBA AccuTarget™ Human GPCR signaling pathway Real-Time PCR primer Set 571 50 Inquire
TBA AccuTarget™ Human Helicase Real-Time PCR primer Set 112 50 Inquire
TBA AccuTarget™ Human Isomerase Real-Time PCR primer Set 91 50 Inquire
TBA AccuTarget™ Human Kinase Real-Time PCR primer Set 673 50 Inquire
TBA AccuTarget™ Ligase Real-Time PCR primer Set 261 50 Inquire
TBA AccuTarget™ Human Lyase Real-Time PCR primer Set 118 50 Inquire
TBA AccuTarget™ Human Motor Real-Time PCR primer Set 111 50 Inquire
TBA AccuTarget™ Human NF-kB pathway Real-Time PCR primer Set 37 50 Inquire
TBA AccuTarget™ Human Nucleic acid binding Real-Time PCR primer Set 2,244 50 Inquire
TBA AccuTarget™ Human Oxidoreductase Real-Time PCR primer Set 502 50 Inquire
TBA AccuTarget™ Human Peptidase Real-Time PCR primer Set 463 50 Inquire
TBA AccuTarget™ Human Phosphatase Real-Time PCR primer Set 179 50 Inquire
TBA AccuTarget™ Human Receptor Real-Time PCR primer Set 1,296 50 Inquire
TBA AccuTarget™ Human Transporter Real-Time PCR primer Set 947 50 Inquire
TBA AccuTarget™ Human Tubulin Real-Time PCR primer Set 11 50 Inquire
TBA AccuTarget™ Human Ubiquitin Real-Time PCR primer Set 70 50 Inquire

AccuTarget™ Real-Time PCR Primer for Individual Gene

Cat. No. Product Description No. of Reactions/gene Add to Cart
TBA AccuTarget™ Human Real-Time PCR Primer for Individual Gene 100 Inquire
TBA AccuTarget™ Human Real-Time PCR Primer for Individual Gene 200 Inquire
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AccuTarget™ Real-Time PCR Primer Set

Organism Product Description No. of genes
Human AccuTarget™ Human Real-Time PCR Primer Set 11,154

AccuTarget™ Real-Time PCR Primer Libraries

Product Description No. of genes
AccuTarget™ Human Antioxidant Real-Time PCR primer Set 38
AccuTarget™ Human Apoptosis Real-Time PCR primer Set 277
AccuTarget™ Human Cancer Real-Time PCR primer Set 1082
AccuTarget™ Human Caspase Real-Time PCR primer Sett 35
AccuTarget™ Human Cell cycle Real-Time PCR primer Set 111
AccuTarget™ Human Cyclase Real-Time PCR primer Set 21
AccuTarget™ Human Cytochrome P450 Real-Time PCR primer Set 37
AccuTarget™ Human Deaminase Real-Time PCR primer Set 19
AccuTarget™ Human GPCR signaling pathway Real-Time PCR primer Set 571
AccuTarget™ Human Helicase Real-Time PCR primer Set 112
AccuTarget™ Human Isomerase Real-Time PCR primer Set 91
AccuTarget™ Human Kinase Real-Time PCR primer Set 673
AccuTarget™ Human Ligase Real-Time PCR primer Set 261
AccuTarget™ Human Lyase Real-Time PCR primer Set 118
AccuTarget™ Human Motor Real-Time PCR primer Set 111
AccuTarget™ Human NF-kB pathway Real-Time PCR primer Set 37
AccuTarget™ Human Nucleic acid binding Real-Time PCR primer Set 2244
AccuTarget™ Human Oxidoreductase Real-Time PCR primer Set 502
AccuTarget™ Human Peptidase Real-Time PCR primer Set 463
AccuTarget™ Human Phosphatase Real-Time PCR primer Set 179
AccuTarget™ Human Receptor Real-Time PCR primer Set 1296
AccuTarget™ Human Transferase Real-Time PCR primer Set 1356
AccuTarget™ Human Transporter Real-Time PCR primer Set 947
AccuTarget™ Human Tubulin Real-Time PCR primer Set 11
AccuTarget™ Human Ubiquitin Real-Time PCR primer Set 70
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References:

Ref.# Reference
0001 Importance of Sox2 in maintenance of cell proliferation and multipotency of mesenchymal stem cells in low-density culture
D.S. Yoon, Y.H. Kim, H.S. Jung, S. Paik, and J.W. Lee, *Brain Korea 21 Project for Medical Science, Yonsei University, Seoul, South Korea and Department of Orthopaedic Surgery, Yonsei University College of Medicine, Seoul, South Korea
Cell Prolif. 2011, 44, 428–440
• More information

Brochure

• siRNA Products and services 2010


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate

• EC Directive 98/79/EC - certificate

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• S. pombe Deletion Mutant Library


The world's first S. pombe Genome-wide Deletion Mutant Library

Bioneer’s exclusive Schizosaccharomyces pombe (S. pombe) Genome-wide Deletion Mutant Library is a powerful tool for large-scale genetic functional analysis, identification and verification research of drug targets and for integrated systems research of cell function. Co-developed by Bioneer and KRIBB in collaboration with Dr. Paul Nurse of the Cancer Research Center in UK, the S. pombe Genome-wide Deletion Mutant Library can be used for genetic and chemical screening such as drug target identification, gene expression profiling, and synthetic lethal profiling. S. pombe offers higher homology with mammalian cells and human genes than those of S. pombe. S. pombe Genome-wide Deletion Mutant Library targets every ORF (4,914 types) in the S. pombe genome through a targeted mutagenesis method. A total of 4,836 heterozygous diploid deletion mutants representing 98.4% of the organism genome and 3,400 haploid deletion mutants with 95.3% genome coverage are available. Since there are different tag sequences (Barcode) in each individual mutant, the library provides an ideal way to approach research in gene function and drug target screening for large numbers of genes by using pools of mutants. It is also possible to analyze biological gene functions through phenotype research with the deletion mutant having specific genes absent.

 

Features and Benefits

  • Genome-wide deletion mutants library (Only 2 kinds exist: S. pombe & S. cerevisiae)
  • It is similar with physiological process of mammalian cells
  • It has human cancer gene and over 30% of homology
  • It has the rapid cell cycle that it is simple to analyze molecular biological mechanism and pathway
  • Phenotype analysis is possible since it is recessive mutant type
  • Unknown genomic function analysis through functional complementation is possible
  • Analyzing genes biological mass function is possible using Genome-wide pool set
  • Cell base HCS drug target screening is possible


Application

Application #1 (Anti-fungal)


Another specific target (pmm1) of terbinafine was identified in addition to erg1, which would be useful for elimination of unwanted side-effects.
The novel target was confirmed by biochemical methods such as HPLC, and the results showed that terbinafine inhibited the enzyme in a direct way in a dose-dependent manner.



Our S. pombe system is better than the previous S. cerevisiae system.
 

 Application #2 (Anti-hyperlipidemic)

Our S. pombe system is better than the previous S. cerevisiae system.
 

Application #3 (General toxicity)

General cytotoxicity screening at the initial stage of drug development to save decision time and prevent a disaster
such as recall.
 

Advantage of our system

1. Complementary to the previous S. cerevisiae system
- by increasing gene number from 6,000 of S. cerevisiae to 11,000 genes including those of S. pombe
2. Superior than the budding yeast system
- S. pombe is named as micro-mammal by NIH grouping of model organisms
- S. pombe system is more sensitive to anti-fungal drug (Terbinafine) by 1,000 times
- S. pombe system is working with anti-hyperlipidemic drug (Simvastatin)
- S. pombe system is constructed and up-graded only by us, which means reliable

General cytotoxicity screening at the initial stage of drug development to save decision time and prevent a disaster
such as recall.
 

 

 






 


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Specifications

S. pombe Deletion Mutant Library Specification
strains Diploid 4,836 strains, Haploid 3,400 strains
Selection Marker KanMX4, G418
Genotype Diploid: SP286 h+/h+ ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32
Haploid: ED666 h+ ade6-M210 ura4-D18 leu1-32
ED668 h+ ade6-M216 ura4-D18 leu1-32
Culture media YES: for rich complete medium
EMM: for minimal medium
Strain verification Check PCR, Sequencing
Storage Store at -70°C (Glycerol type)
Store at 22°C to 25°C (Agar type)
References Analysis of a genome-wide set of gene deletions in the fission yeast
Schizosaccharomyces pombe

Dong-Uk Kim, Jacqueline Hayles, Dongsup Kim, Valerie Wood, Han-Oh Park, Misun Won, Hyang-Sook Yoo, Trevor Duhig, Miyoung Nam, Georgia Palmer, Sangjo Han, Linda Jeffery, Seung-Tae Baek, Hyemi Lee, Young Sam Shim, Minho Lee, Lila Kim, Kyung-Sun Heo, Eun Joo Noh, Ah-Reum Lee, Young-Joo Jang, Kyung-Sook Chung, Shin-Jung Choi, Jo-Young Park, Youngwoo Park, Hwan Mook Kim, Song-Kyu Park, Hae-Joon Park, Eun-Jung Kang, Hyong Bai Kim, Hyun-Sam Kang, Hee-Moon Park, Kyunghoon Kim, Kiwon Song, Kyung Bin Song, Paul Nurse, Kwang-Lae Hoe
Nat Biotechnol. 2010 Jun;28(6): 617-623. •More information

Stc1: A Critical Link between RNAi and Chromatin Modification Required for Heterochromatin Integrity
Elizabeth H. Bayne, Sharon A. White, Alexander Kagansky, Dominika A. Bijos, Luis Sanchez-Pulido, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Chris P. Ponting, Juri Rappsilber and Robin C. Allshire
Cell. 2010 Mar 5;140(5):666-677. •More information

Conservation and Rewiring of Functional Modules Revealed by an Epistasis Map in Fission Yeast
Assen Roguev, Sourav Bandyopadhyay, Martin Zofall, Ke Zhang, Tamas Fischer, Sean R. Collins, Hongjing Qu, Michael Shales, Han-Oh Park, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim, Trey Ideker, Shiv I. Grewal, Jonathan S. Weissman,Nevan J. Krogan
Science. 2008 Oct 17;322(5900):405-410. Epub 2008 Sep 25. •More information

Screening a genome-wide S. pombe deletion library identifies novel genes and pathways involved in genome stability maintenance
Gaurang P. Deshpande, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park and Edgar Hartsuiker.
DNA Repair (Amst). 2009 May 1;8(5):672-679. Epub 2009 Mar 4. •More information

A genome-wide screen of genes involved in cadmium tolerance in Schizosaccharomyces pomb
Patrick J. Kennedy, Ajay A. Vashisht, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Jacqueline Hayles and Paul Russell.
Toxicol Sci. 2008 Nov;106(1):124-139. Epub 2008 Aug 6. •More information

Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryote
Scott J. Dixon, Yaroslav Fedyshyn, Judice L. Y. Koha, T. S. Keshava Prasad, Charly Chahwan, Gordon Chua, Kiana Toufighi, Anastasija Baryshnikova, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Chad L. Myers, Akhilesh Pandey, Daniel Durocher, Brenda J. Andrews, Charles Boone.
Proc Natl Acad Sci U S A. 2008 Oct 28;105(43):16653-16658. Epub 2008 Oct 17. •More information

The tumor suppressor homolog in fission yeast, myh1+, displays a strong interaction with the checkpoint gene rad1+
Kristina Jansson, Jonas Warringer, Anne Farewell, Han-Oh Park, Kwang-Lae Hoe, Dong-Uk Kim, Jacqueline Hayles, Per Sunnerhagen.
Mutat Res. 2008 Sep 26; 644(1-2):48-55. Epub 2008 Jul 16. •More information

Response of Schizosaccharomyces pombe to zinc deficiency
Samantha J. Dainty, Ciarar A. Kennedy. Stephen Watt, Jürg Bähler, and Simon K, Whitehall.
Eukaryot Cell. 2008 Mar; 7(3):454-464. Epub 2008 Jan 18. •More information

Characterization of Sro1, a novel stress responsive protein in Schizosaccharomyces pombe
Geetanjali Sundaram, Santanu Palchaudhuri, Sibapriya Chaudhuri, Sheelarani Karunanithi, Dhrubajyoti Chattopadhyay.
FEMS Yeast Res. 2008 Jun; 8(4):564-573. Epub 2008 Apr 8. •More information

Genomewide identification of pheromone-targeted transcription in fission yeast
Yongtao Xue-Franzén, SØren Kjærulff, Christian Holmberg, Anthony Wright, Olaf Nielsen.
BMC Genomics. 2006 Nov 30; 7:303. •More information

 
Patent 10-2008-037420, 12/989,192


Construction

S. pombe Diploid Deletion Mutant Construction

Diploid deletion mutants in the S. pombe genome were systematically constructed with targeted mutagenesis at each target ORF. The chromosomal location of the ORFs and their DNA sequence information were obtained from the public fission yeast database at the Welcome Trust Sanger Institute (www.genedb.org). The deletion cassette module construct contains a selection marker (Fig. 1), tag sequences (molecular barcodes), and the sequences for homologous recombination (Fig 2). The deletion cassette modules were constructed by PCR with well-designed primers. The cassettes were transformed into the S. pombe, SP286 diploid host strain (h+/ h+, ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32). Deletion of the target ORF was screened for by G418 antibiotic selection (Fig 3). If chromosomal integration occurs properly via homologous recombination at the target ORF in a colony, that colony would obtain antibiotic resistance from the KanMX4 selection marker gene.



S. pombe Haploid Deletion Mutant Construction

S. pombe haploid mutants have been constructed from diploid mutants as follows:




Verification of S. pombe deletion Mutants

Deletion mutants were confirmed by colony PCR with AccuOligo® S. pombe Validation Primer of the PCR product to check the presence of unique bar codes.

We verified the mutant using colony PCR method: PCR enzymes directly reach the chromosomal DNA after breaking the cell wall of mutant colony by enzyme or physical forces. To know whether the mutant grown in G418 plate is the final deletion mutant of target gene or not, we prepared two kinds of gene-specific primers for 5' upstream and 3' downstream of target gene. One, named CP5 was used for colony PCR with common CPN1 and CPN10 primers at the N terminus and the other, named CP3, is for CPC1 and CPC3 primers at the C terminus of the KanMX module, respectively. Finally, we were able to confirm the mutants based on the size of the PCR fragments.



To confirm deletion mutant for a target ORF, the tag sequence was amplified by colony PCR using a primer specific to the target gene and the common primer in KanMX module.

Sequences of CPN1, CPN10, CPC1, CPC3 in KanMX module
CPN1 5-CGTCTGTGAGGGGAGCGTTT-3
CPN10 5-GATGTGAGAACTGTATCCTAGCAAG-3
CPC1 5-TGATTTTGATGACGAGCGTAAT-3
CPC3 5-GGCTGGCCTGTTGAACAAGTCTGGA-3

 



 

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Manual

• S. pombe Deletion Mutant Library


MSDS

S. pombe Deletion Mutant Library


Brochure

S. pombe Deletion Mutant Library - 2011 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.


ISO 9001:2008 - certificate


 

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• S. cerevisiae VN-Fusion Library


Powerful Tool for Protein-Protein Interaction Analysis

The yeast Saccharomyces cerevisiae (S. cerevisiae) is a recognized simple eukaryote model system which genome can be easily manipulated. The S. cerevisiae VN-Fusion Library was created by Dr. Won-Ki Huh of Seoul National University (Korea).
The VN-Fusion Library consists of 5,809 VN-tagged Open Reading Frames (ORFs) covering 93% of the yeast proteome.

Bimolecular Fluorescence Complementation (BiFC) assay

Most biological processes are carried out and regulated by dynamic networks of protein-protein interactions. The Bimolecular Fluorescence Complementation (BiFC) assay is now regarded as one of the most advanced and powerful tools for studying in vivo detection of protein–protein interactions in several orgarnisms. The BiFC assay is based on the formation of a fluorescent complex by fragments of yellow fluorescent protein, brought together by association of two interacting partners fused to the fragments. This approach enables visualization of the subcellular localizations of specific protein complexes in the normal intracellular environment.


 

Features and Benefits


A powerful tool for studying protein-protein interactions in living cells
- Non-invasive method for analyzing fluorescence without the need for any external cofactors

Clear visualization of subcellular protein-protein interaction localization
- Formation of a fluorescent complex

Stronger signal and direct readout measurable with relatively simple equipment
- Using a fluorescence microscope

Genome-wide high-throughput screening possible
- 93% yeast proteome coverage

Unknown protein function analysis through functional complementation is possible

Analysis of proteinylation (ubiquitination, sumoylation, neddylation) is possible

 

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Specifications

S. cerevisiae VN-Fusion Library
Strains 5,809 strains
Selection Marker KIURA3
Genotype All S. cerevisiae VN-Fusion strains were derived from BY4741
(MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0)
Haploid
Culture media YPD: for general culture and maintenance medium
SC-Ura or SC-His: for medium selection & counter selection (auxotrophic culture)
Strain verification Medium selection & Counter selection
Check PCR
Storage Store at -70°C (Glycerol type)
Store at 22°C to 25°C (Agar type)
References in vivo quantification of protein-protein interactions in Saccharomyces cerevisiae using bimolecular fluorescence complementation assay
Min-Kyung Sung, Won-Ki Huh J Microbiol Methods. 2010. 83(2), 194-201.
• More information

Bimolecular fluorescence complementation analysis system for in vivo detection of protein-protein interaction in Saccharomyces cerevisiae
Min-Kyung Sung, Won-Ki Huh Yeast. 2007. 24(9), 767-775.
• More information

Construction, verification and experimental use of two epitope-tagged collections of budding yeast strains
Russell Howson, Won-Ki Huh, Sina Ghaemmaghami, James V. Falvo, Kiowa Bower, Archana Belle, Noah Dephoure, Dennis D. Wykoff, Jonathan S. Weissman and Erin K. O’Shea
Comp Funct Genom. 2005. 6, 2–16.
• More information

Global analysis of protein localization in budding yeast
Won-Ki Huh, James V. Falvo, Luke C. Gerke, Adam S. Carroll, Russell W. Howson, Jonathan S. Weissman and Erin K. O’Shea Nature. 2003. 425, 686-691.
• More information
Patent 10-2009-0048746


Construction

A ~2.5 kb DNA cassette including the VN and KlURA3 marker gene was amplified by PCR using pFA6a-VN-KlURA3 as a template, and "universal" F2CORE (5'-GGTCGACGGATCCCCGGGTT-3') and R1CORE (5'-TCGATGAATTCGAGCTCGTT-3') primers. The resulting DNA cassette was transformed into ~6,000 yeast strains from the TAP-tagged collection (Ghaemmaghami et al., 2003). The transformed cells were spread on SC-Ura plates and incubated at 30°C for 3 days. Among several colonies, 10 colonies were picked and streaked on fresh SC-Ura plates, and incubated at 30°C for 24 hours. To check correct switching to the VN tag, cells grown on SC-Ura plates were replica-plated onto SC-His plates. Cells growing on SC-His plates were discarded.



Validation

To confirm that the TAP tag was successfully switched to the VN tag, the colonies selected by SC-Ura medium were checked by colony PCR using the CHK1 [gene-specific primer] and CHK2 [5'-CACCATGGTGGCGATGGATC-3'] primers. A small aliquot of freshly grown cells was resuspended in 5 μl water and boiled in a 96-well plate (99°C for 5 min in the thermal cycler). 5 μl boiled cells and 2.5 μl of 5 μM unique CHK1 primer were added to a PCR premix (AccuPower® HotStart PCR PreMix [Bioneer, K-5050, Korea], 0.25 μl 50 μM CHK2 primer) and PCR was performed [94°C 3 min, 35×(94°C 30 s, 50°C 30 s, 72°C 1 min), 72°C 10 min]. We analyzed the results of PCR by agarose gel electrophoresis, identifying correct integrants by the presence of a PCR product of appropriate size [~600 bp].




Application

Visualization of subcellular location of protein–protein interaction


Example: Fluorescence images of diploid cells expressing the C-terminally VN-tagged Sis1 and the C-terminally VC-tagged Sis1 together.

Sis1 is a Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1 (Luke et al., 1991), and has been shown to form a homodimer (Sha et al., 2000). The bimolecular fluorescence complementation (BiFC) signal was clearly detected in the nucleus and the cytoplasm, indicating that the VN-tagged Sis1 interacted with the VC-tagged Sis1 in the nucleus and the cytoplasm, where Sis1 is reported to be localized (Huh et al., 2003). The BiFC signal was not detected in the diploid cells expressing either the VN-tagged Sis1 or the VC-tagged Sis1 alone.




 

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Manual

• S. cerevisiae VN-Fusion Library-Manual


MSDS

S. cerevisiae VN-Fusion Library-MSDS


Brochure

S. cerevisiae VN-Fusion Library - 2011 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.


ISO 9001:2008 - certificate

 

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Gene Synthesis Service


100% sequence guarantee–Gene Synthesis service

With nearly 20 years of in-house production of raw materials (phosphoramidite, reagents and solvents), oligo synthesis, molecular biology research reagent production experience, Bioneer now offers a complete custom gene synthesis service including sequence design, codon optimization, synthesis, cloning and sequencing.

Gene synthesis is the most cost effective way to enhance your research. In as little as 2 weeks, you can have your Gene cloned in hand and 100% sequence guaranteed. And with Bioneer’s great pricing it can cost less to order a synthetic gene from us than to buy all the kits and reagents necessary to PCR, ligate, clone, grow, purify and sequence your gene of interest. If you like, our free codon optimization will increase protein expression rates and can enhance protein function. In addition our optimization can make previously un-clonable sections of DNA easy to work with. Send us your sequence, Gene ID or an accession number. Let us know what you need and we will deliver!

Bioneer also offers mutagenesis as well as cloning and subcloning services. Bioneer strives to provide the highest quality synthetic genes at a great price. Our goal is to always provide you with the best value for your research dollar.

With high throughput DNA synthesis facilities around the world, Bioneer’s daily capacity is unsurpassed. Bioneer is unrivalled in its ability to address the needs of our customers: Whether you need one gene, or one hundred. We respond to your needs–personally.

Features and Benefits

  • 100% Sequence Guarantee: Individual synthetic genes are confirmed by Sequencing
  • Codon Optimization - Free of charge!: Complimentary codon optimization to enhance protein expression and function
  • Value Pricing: The best value for your research dollar

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Applications


Antibody Construction
Antibodies targeted toward specific diseases or targets can be codon optimized for maximum expression in the host organism. Also, an antibody library can be constructed to screen for the most efficient antibody variant.
 

Organism Production Optimization
Optimize expression of genes related to resource production to maximize industrial biological production efficiency.
 

Gene Construction
Get difficult-to-clone DNA sequences easily and enhance the quality of your research by constructing hypothetical genes.
 

Protein Modification
Codon optimization can increase protein expression efficiency, and a mutant library derived from this process can yield proteins with increased function. Optimizations include secondary structure removal, and repeat reduction as well as organism optimizations.
 

Schematics of Gene Synthesis Process



Technical Support
contact@bioneer.com.au

 

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Gene synthesis Service

Q1. What does Bioneer provide in the Gene Synthesis Service?
We provide 100% sequence-matched gene to our customers in a short time! We have a large capability of oligomer synthesis through "HT-oligo™" oligonucleotide synthesizer developed by our own technology. That advantage in oligo synthesis, along with strong background in molecular biological, makes it possible to generate your gene-of-interest with superior quality in an economical way.
Q2. What is the difference between oligo synthesis and Gene Synthesis?
Oligo synthesis means "chemical" synthesis of DNA. Gene Synthesis also includes a step of oligo synthesis, but it contains additional steps such as analysis of sequences to be synthesized, design and mixing of oligos, ligase chain reaction, PCR and cloning of synthesized gene into a vector.
Q3. What Gene Synthesis services Bioneer provide to us?
We provide Gene Synthesis, Mutagenesis, Gene Cloning, and Gene-to-Protein Service.
Q4. What are the applications of Gene Synthesis?
Gene Synthesis could be used as useful upstream method of various applications. They include antibody construction, organism production optimization, gene construction, protein modification, point mutation, and gene cloning.


Technical Support for Gene Synthesis FAQ

Q1. What is the maximum length of gene can be synthesized?
There is no limitation in its length virtually, but it may take longer time than expected if length is >3 kb.
Please contact Bioneer's Gene Synthesis Team for further discussion about it.
Q2. Is it possible to generate new vector of gene (form of circular DNA)?
Yes, it is. But it should be noted that pricing and/or working period will be different from that of linear DNA synthesis, because special procedures could be applied.
Q3. What is the final form product provided to me in Gene Synthesis Service?
Your gene of interest will be given as an insertion into our vector, either pGEM-B1 (standard) or pGEM-B2 (in case of toxic gene) vector, in 2~5 µg of lyophilized plasmid DNA form.
Q4. Why additional price/more working period could be applied in case of higher/lower GC contents, tandem repeats, inverted repeats, and/or homo-polymeric sequence?
PCR is the most popular way to be used for Gene Synthesis. But the existence of repeated sequence or other barriers often prevents success of Gene Synthesis through PCR. In that case design of more or alternative experimental procedures should be required, which result in additional pricing.
Q5. Is it possible to clone my gene-of-interest into the vector I choose?
Yes, you can also use Bioneer's Gene Cloning Service. Please fill out everything in the third sheet of our standard order form and email it to contact@bioneer.com.au. You will get discount of pricing if you use Gene Synthesis Service and Cloning Service simultaneously.
Q6. Is it possible to do codon optimization with my gene-of-interest?
Yes. Please choose "Yes" and write exact species in the codon optimization field of our standard order form.
Q7. What codon optimization program will be used?
We are using the codon optimization program which has been developed by Bioneer and KAIST (Korea Advanced Institute of Science and Technology) together.


Technical Support for Cloning & Mutagenesis Service

Q1. What should I provide for Gene Cloning Service from Bioneer?
You need to send the following materials;
1)a vector for cloning (plasmid DNA; 150~200 ng/µl, >10 µl volume), and
2)DNA templates (50 ng/µl, >10 µl volume) which will be used as an insert,
through FedEx to the following address;

8-11 Munpyeongseo-ro, Daedeok-gu, Daejeon, 306-220, South Korea

Please let us know if you do not have a vector for cloning. We will purchase that vector from its provider for your project, and pricing of that vector will be added to the final quotation.
Q2. Is it possible to increase quantity of vector with the cloned gene?
Yes. Five days and $100 of additional charge will be added per increase of 100 µg of vector.
Q3. Is directional cloning possible?
Yes. Five days and $50 of additional charge will be added to the final quote.
Q4. Can I change gene sequence after my service started?
You may change part of your sequence anytime before we complete your order. If that change occurs, you may be charged $50 (less than 9 bp in either 5’- or 3’- end) or $100 (less than 20 bp inside the gene).
Please contact us as soon as you need to change the sequence.
Q5. How much do I have to pay if I cancel my order?
You will be charged 50% of your quotation price, if you cancel your order within 5 days after you receive confirmation of order email from Bioneer. After 5 days of confirmation email, 80% of your quotation price will be charged.
Q6. How can I resuspend my gene product? What would be the best storage condition?  
You can add 20 µl of distilled water or TE buffer to the delivered DNA, with the final concentration of 250 ng/µl.
We recommend the solubilized DNA to be incubated at 4 °C for 10 min before use. You can store the DNA at room temperature in its lyophilized form. For long-term storage it would be recommended to put the DNA tube in -20 °C freezer.
Q7. Does Bioneer store information about my gene and its product after delivery of them to me?
We store information about your gene and its product for 6 months after delivery. If you want us to dispose it immediately after production, please contact us.



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• Gene Synthesis


Codon optimizations and Gene synthesis services. 100% sequence guarantee

Bioneer is pleased to offer our Custom Gene synthesis service to help customers save time and money while improving research results.

Gene synthesis is the most cost effective way to enhance your research. In as little as 2 weeks, you can have your Gene cloned in hand and 100% sequence guaranteed. And with Bioneer’s great pricing it can cost less to order a synthetic gene from us than to buy all the kits and reagents necessary to PCR, ligate, clone, grow, purify and sequence your gene of interest. If you like, our free codon optimization will increase protein expression rates and can enhance protein function. In addition our optimization can make previously un-clonable sections of DNA easy to work with. Send us your sequence, Gene ID or an accession number. Let us know what you need and we will deliver!


Features and Benefits

  • 100% Sequence Guarantee: Every synthetic gene is 100% confirmed by Sequencing
  • Codon Optimization – Free of charge!: Complimentary codon optimization for custom gene to enhance protein expression and function
  • Value Pricing: The best value for your research dollar

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Applications


Antibody Construction
Antibodies targeted toward specific diseases or targets can be codon optimized for maximum expression in the host organism. Also, an antibody library can be constructed to screen for the most efficient antibody variant.
 

Organism Production Optimization
Optimize expression of genes related to resource production to maximize industrial biological production efficiency.
 

Gene Construction
Get difficult-to-clone DNA sequences easily and enhance the quality of your research by constructing hypothetical genes.
 

Protein Modification
Codon optimization can increase protein expression efficiency, and a mutant library derived from this process can yield proteins with increased function. Optimizations include secondary structure removal, and repeat reduction as well as organism optimizations.
 

Schematics of Gene Synthesis Process



 

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MSDS

Gene Synthesis Service


Brochure

Gene Synthesis Service


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

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Download  Gene Synthesis Order Form

Gene Synthesis Service
Price 0.39/bp (Normal Sequence / < 3kb)
Minimum Synthesis Price $180.00
Synthesis Period 1 ~ 1500 bp 7 ~ 15 working days (Average 12 working days) 
1501 ~ 3000 bp 14 ~ 25 working days (Average 21 working days)
3001 bp ~ Inquire
Delivery Form 2 ~ 5ug of lyophilized plasmid
Cloning Vector pUC type (see Vector information in the order form)
Subcloning Price $100.00 (Gene cloning service)
Additional Service Produce high yield of plasmid DNA ($100.00/100μg)



* Additional charges will apply for gene segments containing complexities such as high or low GC content, repeat sequences or homopolymeric runs. If any of your sequence is found to contain the above listed complexities, you will be contacted by our Gene Synthesis Specialist.
* When choosing the subcloning service with a commercial vector, a vector purchase cost will be billed separately.
* Synthesized genes will be sequenced. Only 100% sequence identity products will be shipped.
* 50% charge of service bill for cancellation in 5days.
80% charge of service bill for cancellation after 5days.
Free of charge for cancellation after guarantee duration(Guarantee duration: gene synthesis period except delivery)


Quotations and Ordering

1. Download the ordering form(s) from the link on top.
2. Fill out the form and email the form to: contact@bioneer.com.au
3. We will review the order and send you service information (final quote and service period) via email.
4. If you decide to go ahead with the service, please confirm the service by an email.
5. The service will be initiated when we send out the service start alert email.
(For the Cloning and Point mutation services, the service begins when we receive the raw material from you.)
* Please fill in the personal information columns (contact information).
We need it to fine-tune the service and expedite the order.

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• Mutagenesis


Deletion, insertion and point mutations. 100% sequence guarante

The fastest and most cost effective way to construct a mutant gene for protein structure and function research or to increase enzyme function is to use our Mutagenesis Service combined with our Gene Synthesis Service. Site-directed mutation such as Point Mutation as well as deletion, insertion mutation services are available. For unsurpassed quality and value pricing, partner with Bioneer today!


Features and Benefits

  • 100% Sequence Guarantee: All point mutation as well as deletion mutation products are 100% confirmed by sequencing
  • Codon Optimization – Free of charge!: Complimentary codon optimization to enhance protein expression and function
  • Value Pricing: The best value for your research dollar

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Applications


Antibody Construction
Antibodies targeted toward specific diseases or targets can be codon optimized for maximum expression in the host organism. Also, an antibody library can be constructed to screen for the most efficient antibody variant.
 

Organism Production Optimization
Optimize expression of genes related to resource production to maximize industrial biological production efficiency.
 

Gene Construction
Get difficult-to-obtain DNA sequences without a template and upgrade the quality of your research by constructing hypothetical genes.
 

Protein Modification
Codon optimization can increase protein expression efficiency, and a mutant library derived from this process can yield proteins with increased function. Optimizations include secondary structure removal, and repeat reduction as well as organism optimizations.
 

Schematics of Gene Synthesis Process

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MSDS

Gene Synthesis Service


Brochure

Gene Synthesis Service


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate


 

]]>
Download  Gene Synthesis Order Form

Mutagenesis Service
Accepted Materials Plasmid, Cultured E. coli cell
Price $200.00/point mutation (Stand-alone order/ ~ 1kb insert)
Additional Costs With cultured cells $ 50.00
$50.00/500bp (Orders of inserts of over 1kb)
Service Period ~ 1 kb 10 ~ 15 working days
1kb ~ 3kb 15 ~ 25 working days
3kb ~ 5kb 25 ~ 40 working days
5kb ~ Inquire
Additional Service Produce high yield of plasmid DNA ($100.00/100ug)
Proceed with Gene synthesis ($100.00 discount)


* Additional charges will apply for gene segments containing complexities such as high or low GC content, repeat sequences or homopolymeric runs. If any of your sequence is found to contain the above listed complexities, you will be contacted by our Gene Synthesis Specialist.
* When choosing the subcloning service with a commercial vector, a vector purchase cost will be billed separately.
* Synthesized genes will be sequenced. Only 100% sequence identity products will be shipped.
* 50% charge of service bill for cancellation in 5days.
80% charge of service bill for cancellation after 5days.
Free of charge for cancellation after guarantee duration(Guarantee duration: gene synthesis period except delivery)


Quotations and Ordering

1. Download the ordering form(s) from the link on top.
2. Fill out the form and email the form to: contact@bioneer.com.au
3. We will review the order and send you service information (final quote and service period) via email.
4. If you decide to go ahead with the service, please confirm the service by an email.
5. The service will be initiated when we send out the service start alert email.
(For the Cloning and Point mutation services, the service begins when we receive the raw material from you.)
* Please fill in the personal information columns (contact information).
We need it to fine-tune the service and expedite the order.

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• Gene Cloning


Gene cloning and subcloning of genes into any cloning vector you want-100% sequence guaranteed.

Let us perform the time-consuming task of gene cloning, subcloning and sequence verification. Bioneer brings years of experience in molecular biology together with state-of-the-art QC to guarantee the quality of custom gene cloning service.


Features and Benefits

  • 100% Sequence Guarantee: Individual custom clones are 100% confirmed by sequencing
  • Value Pricing: The best value for your research dollar
]]>
Applications


Antibody Construction
Antibodies targeted toward specific diseases or targets can be constructed for maximum expression in the host organism. Also, an antibody library can be constructed to screen for the most efficient antibody variant.
 

Organism Production Optimization
Optimize expression of genes related to resource production to maximize industrial biological production efficiency.
 

Gene Construction
Get difficult-to-obtain DNA sequences without a template and upgrade the quality of your research by constructing hypothetical genes.
 

Protein Modification
Codon optimization can increase protein expression efficiency, and a mutant library derived from this process can yield proteins with increased function. Optimizations include secondary structure removal, and repeat reduction as well as organism optimizations.
 

Schematics of Gene Synthesis Process


 

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MSDS

Gene Synthesis Service


Brochure

Gene Synthesis Service


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

]]>
Download  Gene Synthesis Order Form

Gene Cloning Service
Accepted Materials Plasmid, PCR product, Cultured E. coli cell
Price $200.00/cloning (~ 1kb insert / ~ 6kb vector)
Additional Costs With cultured cells $ 50.00
Insert $ 50.00 / 500bp (>1kb insert)
Vector 6 ~ 8kb: $ 50.00
8 ~ 10kb: $ 150.00
10kb ~ : inquire
Service Period 1 ~ 6kb(vector+insert) ~ 10 working days
6 ~ 8kb(vector+insert) 10 ~ 15 working days
8 ~ 10kb(vector+insert) 15 ~ 30 working days
10kb ~ (vector+insert) Inquire
Additional Service Produce high yield of plasmid DNA ($100.00/100 ug)
Proceed with Gene synthesis ($100.00 discount)

* Additional charges will apply for gene segments containing complexities such as high or low GC content, repeat sequences or homopolymeric runs. If any of your sequence is found to contain the above listed complexities, you will be contacted by our Gene Synthesis Specialist.
* When choosing the subcloning service with a commercial vector, a vector purchase cost will be billed separately.
* Synthesized genes will be sequenced. Only 100% sequence identity products will be shipped.
* 50% charge of service bill for cancellation in 5days.
80% charge of service bill for cancellation after 5days.
Free of charge for cancellation after guarantee duration(Guarantee duration: gene synthesis period except delivery)


Quotations and Ordering

1. Download the ordering form(s) from the link on top.
2. Fill out the form and email the form to: contact@bioneer.com.au
3. We will review the order and send you service information (final quote and service period) via email.
4. If you decide to go ahead with the service, please confirm the service by an email.
5. The service will be initiated when we send out the service start alert email.
(For the Cloning and Point mutation services, the service begins when we receive the raw material from you.)
* Please fill in the personal information columns (contact information).
We need it to fine-tune the service and expedite the order.

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• Standard Oligos


For routine applications, Bioneer offers standard custom Oligos without modification in tube format from  25 nmole scale upwards at very competitive pricing. 
Bio-RP (near-HPLC) purification is included at no additional charge and these oligos can be ordered online or via e-mail from this website with simplicity.

Features and Benefits

  • Free Bio-RP purification: Near HPLC purity at a standard oligo price
  • Quick turnaround time: < 3.5 business days from order to bench in most cases
  • Competitive pricing: Great value for your research dollar
  • Quality that you can rely on

Why is Bio-RP purification better than desalting?

Most oligos sold are merely deprotected/desalted. The process of deprotection/desalting only partially purifies the oligo and leaves behind many impurities* and failure products (truncated oligos that will not amplify and that may interfere with certain applications). These can lead to artificially inflated OD readings that increase with oligo length.
Bio-RP purification removes these contaminants and failure products, resulting in an oligo that demonstrates near HPLC purity. The advantage to you is that our product contains only quality oligos minus impurities that may inhibit some PCR reactions and that potentially skew qPCR reactions.
We deliver the same amount of active oligo as our competitors; they just have more “other” artificially inflating their OD.
To demonstrate this, plates of Oligos of various length were tested for concentration in 2 steps:
1) following a deprotection/desalting step only, and 2) following Bio-RP purification. (Fig. 1)

The results of these tests show that the amount of failed sequences and impurities* increases with length (as expected), but the failure product is not removed by deprotection/desalting alone. This results in inflated OD readings for oligos depending on oligo length.
(Table 1)


Figure 1.
Plates of Oligos of various length were tested for concentration following desalting and then by Bio-RP cartridge purification.
Note inflated OD readings when deprotection/desalting alone is used.

Oligo Length (# bases) 18 - 24 24 - 29 30 - 34 35 - 41
OD Inflation 38% 45% 60% 77%

Table 1. Average OD inflation for oligos of various length when protection/desalting alone is employed v. Bio-RP purified product.
Note for longer oligos; up to 77% of product does not consist of functional oligo.

*Impurities in desalted oligos may include: Acetonitrile, Pyridine, Iodine,
Ethylthiotetrazole, Dichloromethane, Acetic acid, Acrylonitrile, Benzamide and Isobutyramide.



 

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Standard Oligo Pricing

Synthesis Scale (μmole) Price/Base
($)
Base Limitation(mer) Purification Price
($)
Guaranteed Yield (OD)
[ based on 20 bases ]
Approximate Working Days to Ship
BioRP PAGE HPLC BioRP PAGE HPLC BioRP PAGE HPLC
0.025 0.29 15-60 Free - - 2 1 1.5 2 3 3
0.05 0.47 10-75 Free 40.00 40.00 4 2 2.5 2 3 3
0.2 0.92 5-110 Free 59.00 59.00 8 6 7 2 3 3
1 1.75 5-130 Free 100.00 100.00 30 18 25 2 3 3
10 14.00 5-50 Free 280.00 280.00 300 150 200 2 3 3
15 22.00 5-50 Free 420.00 420.00 Inquire Inquire Inquire 3 4 4
* The synthesis scales refer to the initial starting point for a synthesis. The starting synthesis scale and the length of the oligo will influence the final yield.


For orders larger than 96 oligos (High-Throughput) pricing, click here.

For Modification oligos pricing, click here.

For Dual-labeled Probes pricing, click here.

 

Additional Services - Pricing

Post-Handling Tube Price ($) Plate Price ($)
Concentration normalized-Standard 0.30 0.15 (per well)
Concentration normalized-Custom 0.40 0.20 (per well)
Bar-code Label No Charge No Charge
Dried No Charge No Charge
Aliquoting to daughter Plates 0.40 0.20 (per well)
Mixing primers 0.40 0.20 (per well)
Individual Tube plate-Labeled - 0.40 (per well)
Custom plate - 10.00
Double strand (Annealing service) 30.00/Pair -
MALDI-TOF (QC) No Charge No Charge
MALDI-TOF (SNP or Genotyping) - 2.00 (per well)
Shipping Charge Please see 'Ordering / Shipping' Please see 'Ordering / Shipping'
Hand mix service (MIX base Code) 100.00 (1~250base) 50.00 (1~250base)
Remainder in plate service -  95.00 (96 well Plate),
150.00 (384 well Plate)
Circular ssDNA service 300.00/oligo 225.00 / oligo

Custom Analytical Service

Items Tube Price ($) Plate Price ($) large scale
I-E HPLC 50.00 2.50 (per well) 50.00
RP HPLC 50.00 2.50 (per well) 50.00
Capillary electrophoresis 50.00 2.50 (per well) 50.00
PAGE analysis 15.00 1.00 (per well) 15.00
MALDI-TOF analysis, Spectrocheck - 2.00 (per well) -
MALDI-TOF analysis, other mass system Free Free Free

]]>
Manual

Treatment for thiol modified oligonucleotides

Anneal complementary pairs of oligonucleotides


MSDS

Oligos


Brochure

Oligonucleotides 2010 Brochure


FAQ

Oligo FAQ


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

]]>

• High Throughput Oligos


For higher throughput applications, Bioneer provides plate Oligos in a variety of formats including:
- 96-well plates
- 96-deep-well plates
- 96-deep-well plates with individual tubes
- 384-well plates 
Bio-RP (near-HPLC) purification is included at no additional charge and these oligos can be ordered via the e-mail template provided on this website with simplicity.


Features and Benefits

  • Free Bio-RP purification: Near HPLC purity at a standard Oligo price
  • Broad range of modifications available: If you don’t see it, just ask, we can probably do it
  • Competitive pricing: Great value for your research dollar


Why is Bio-RP purification better than desalting?

Most oligos sold are merely deprotected/desalted. The process of deprotection/desalting only partially purifies the oligo and leaves behind many impurities* and failure products (truncated oligos that will not amplify and that may interfere with certain applications). These can lead to artificially inflated OD readings that increase with oligo length.
Bio-RP purification removes these contaminants and failure products, resulting in an oligo that demonstrates near HPLC purity. The advantage to you is that our product contains only quality oligos minus impurities that may inhibit some PCR reactions and that potentially skew qPCR reactions.
We deliver the same amount of active oligo as our competitors; they just have more “other” artificially inflating their OD.
To demonstrate this, plates of Oligos of various length were tested for concentration in 2 steps:
1) following a deprotection/desalting step only, and 2) following Bio-RP purification. (Fig. 1)

The results of these tests show that the amount of failed sequences and impurities* increases with length (as expected), but the failure product is not removed by deprotection/desalting alone. This results in inflated OD readings for oligos depending on oligo length.
(Table 1)


Figure 1.
Plates of Oligos of various length were tested for concentration following desalting and then by Bio-RP cartridge purification.
Note inflated OD readings when deprotection/desalting alone is used.

Oligo Length (# bases) 18 - 24 24 - 29 30 - 34 35 - 41
OD Inflation 38% 45% 60% 77%

Table 1. Average OD inflation for oligos of various length when protection/desalting alone is employed v. Bio-RP purified product.
Note for longer oligos; up to 77% of product does not consist of functional oligo.

*Impurities in desalted oligos may include: Acetonitrile, Pyridine, Iodine,
Ethylthiotetrazole, Dichloromethane, Acetic acid, Acrylonitrile, Benzamide and Isobutyramide.

  • Free Bio-RP purification: Near HPLC purity at a standard oligo price
  • Quick turnaround time: < 1 week from order to bench in most cases
  • Competitive pricing: Great value for your research dollar - some of the lowest per base pricing available
  • Quality that you can rely on

 

Free Bio-RP purification: Near HPLC purity at a standard Oligo price
  • Broad range of modifications available: If you don’t see it, just ask, we can probably do it
  • Competitive pricing: Great value for your research dollar
]]>
HT-Oligo™ Price

Synthesis Scale (μmole) Price/Base
($)
Base Limitation(mer) Purification Price
($)
Guaranteed Yield (OD)
[ based on 20 bases ]
Working Day
BioRP PAGE HPLC BioRP PAGE HPLC BioRP PAGE HPLC
0.025 0.17 15-60 Free - - 2 1 1.5 2 3 3
0.05 0.21 10-75 Free 25.00 20.00 4 2 2.5 2 3 3
0.2 0.39 5-110 Free 30.00 25.00 8 6 7 2 3 3
1 0.94 5-130 Free 50.00 50.00 30 18 25 2 3 3
10 7.00 5-50 Free - - 300 150 200 Inquire Inquire Inquire
15 11.00 5-50 Free - - Inquire Inquire Inquire Inquire Inquire Inquire

* The synthesis scales refer to the initial starting point for a synthesis. The starting synthesis scale and the length of the oligo will influence the final yield.


For Standard oligos pricing, click here.

For Modification oligos pricing, click here.

For Dual-labeled Probes pricing, click here.


Additional Service Price

Post-Handling Tube Price ($) Plate Price ($)
Concentration normalized-Standard 0.30 0.15 (per well)
Concentration normalized-Custom 0.40 0.20 (per well)
Bar-code Label No Charge No Charge
Dried No Charge No Charge
Aliquoting to daughter Plates 0.40 0.20 (per well)
Mixing primers 0.40 0.20 (per well)
Individual Tube plate-Labeled - 0.40 (per well)
Custom plate - 10.00
Double strand (Annealing service) 30.00/Pair -
MALDI-TOF (QC) No Charge No Charge
MALDI-TOF (SNP or Genotyping) - 2.00 (per well)
Shipping Charge Shipping charge may apply Shipping charge may apply
Hand mix service (MIX base Code) 100.00 (1~250base) 50.00 (1~250base)
Remainder in plate service - 95.00 (96 well Plate),
$ 150.00 (384 well Plate)
Circular ssDNA service 300.00/oligo 225,00 / oligo


 

Custom Analytical Service

Items Tube Price ($) Plate Price ($) large scale
I-E HPLC 50.00 2.50 (per well) 50.00
RP HPLC 50.00 2.50 (per well) 50.00
Capillary electrophoresis 50.00 2.50 (per well) 50.00
PAGE analysis 15.00 1.00 (per well) 15.00
MALDI-TOF analysis, Spectrocheck - 2.00 (per well) -
MALDI-TOF analysis, other mass system Free Free Free


 

Contact Us

E-mail : oligos@bioneer.com.au


 

]]>
Manual

Treatment for thiol modified oligonucleotides

Anneal complementary pairs of oligonucleotides


MSDS

Oligos


Brochure

Oligonucleotides 2010 Brochure


FAQ

Oligo FAQ


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

]]>

• Modified Oligos



Features and Benefits

  • Free Bio-RP purification: Near HPLC purity at a standard Oligo price
  • Broad range of modifications available: If you don’t see it, just ask, we can probably do it
  • Competitive pricing: Great value for your research dollar
]]>
Modification Oligos Price

3' Modification

Modification Price/Modification ($) Working
Day
0.05 umole 0.2 umole 1 umole 10 umole 15 umole
DIG 82.50 92.50 142.50 712.50 NA 4
C6 Amine 15.00 30.00 47.00 235.00 NA 4
Phosphate 22.00 30.00 45.00 240.00 NA 4
Biotin 54.00 60.00 100.00 520.00 NA 4
C3 spacer 36.00 45.00 66.00 280.00 NA 4
C6 spacer 36.00 45.00 66.00 280.00 NA 4
C12 spacer 36.00 45.00 66.00 280.00 NA 4
C18 atom spacer 45.00 55.00 80.00 325.00 NA 4
dS spacer 47.00 55.00 80.00 320.00 NA 4
FAM 50.00 60.00 110.00 670.00 NA 4
TAMRA 77.00 96.00 137.00 750.00 NA 4
Thiol 70.00 90.00 130.00 690.00 NA 4
Texas Red 165.00 185.00 285.00 1425.00 NA 4
JOE 165.00 185.00 285.00 1425.00 NA 4
ROX 140.00 150.00 250.00 1250.00 NA 4
Cy5 95.00 115.00 175.00 1050.00 NA 4
Cy3 95.00 115.00 175.00 1050.00 NA 4
Dabcyl 80.00 100.00 200.00 1050.00 NA 4
BHQ1 80.00 100.00 200.00 1050.00 NA 4
BHQ2 80.00 100.00 200.00 1050.00 NA 4
Cholesteryl 80.00 100.00 240.00 1200.00 NA 4
3'-Inverted dT 38.00 50.00 80.00 380.00 NA 4
3'-Inverted dA 38.00 50.00 80.00 380.00 NA 4
3'-Inverted dC 38.00 50.00 80.00 380.00 NA 4
3'-Inverted dG 38.00 50.00 80.00 380.00 NA 4
Ara-dC 80.00 100.00 310.00 Under 3 (set-up charge $200.00)   4
5-F-dU 90.00 110.00 350.00 Under 3 (set-up charge $250.00)   4
2',3'-ddC 80.00 100.00 310.00 Under 3 (set-up charge $200.00)    
AlexaFluor 488 180.00 200.00 350.00 1,750.00   4
AlexaFluor 532 250.00 275.00 430.00 2,150.00   4
AlexaFluor 546 250.00 275.00 430.00 2,150.00   4
AlexaFluor 594 288.00 325.00 520.00 2,600.00   4
AlexaFluor 647 180.00 200.00 350.00 1,750.00   4
AlexaFluor 660 288.00 325.00 520.00 2,600.00   4
AlexaFluor 750 288.00 325.00 520.00 2,600.00   4
N6-methyl-2'-deoxyadenosine 120.00 150.00 220.00 Under 3 (set-up charge $150.00)   4
DNP (2,4-dinitrophenyl)-TEG 125.00 175.00 275.00 Under 3 (set-up charge $150.00)   4
Cy3.5 180.00 250.00 380.00 1,050.00   4
Cy5.5 180.00 250.00 380.00 1,050.00   4
Puromycine 80.00 100.00 200.00 1,050.00   4
Yakima Yellow 120.00 150.00 220.00 Inquire   4
3'-dA 250.00 275.00 350.00     4
3'-dC 250.00 275.00 350.00     4
3'-dG 250.00 275.00 350.00     4
3'-dT 250.00 275.00 350.00     4
5-Nitroindole 125.00 175.00 250.00     4
2'-F-rA 65.00 80.00 115.00 Under 3 (set-up charge $150.00)   4
2'-F-rC 65.00 80.00 115.00 Under 3 (set-up charge $150.00)   4
2'-F-rG 65.00 80.00 115.00 Under 3 (set-up charge $150.00)   4
2'-F-rU 65.00 80.00 115.00 Under 3 (set-up charge $150.00)   4
Maleimide 50.00 65.00 95.00 Under 3 (set-up charge $150.00)   4
2-Aminopurine 75.00 90.00 125.00 Under 3 (set-up charge $150.00)   4
2,6-Diaminopurine 75.00 90.00 125.00 Under 3 (set-up charge $150.00)   4
Dithiol 150.00 175.00 275.00 1,500.00   4
EDTA-C2-dT 120.00 150.00 275.00 Under 3 (set-up charge $150.00)   4
Thymidine Glycol 150.00 175.00 275.00 Under 3 (set-up charge $150.00)   4
Zebularine 65.00 80.00 115.00 Under 3 (set-up charge $150.00)   4
3' Methylene Blue 150.00 175.00 275.00 Under 3 (set-up charge $250.00)   4
3' AMCA (amino-methyl-coumarin-acetate) 125.00 175.00 275.00 Under 3 (set-up charge $175.00)   4
3' Deoxypurine (2'-DeoxyNebu larine) 75.00 90.00 125.00 Under 3 (set-up charge $250.00)   4
3' PEG-2000 Inquire Inquire Inquire Inquire NA 4
3' Azide 150.00 175.00 275.00 1,500.00 NA 4
3' Acrylamide (acrydite) 90.00 110.00 350.00 1,500.00 NA 4
O6-Methyl 2'-dG 75.00 90.00 125.00 375.00 NA  
O4-Methyl-dT 75.00 90.00 125.00 375.00 NA  
dT-Alkyne 225.00 250.00 350.00 1,750.00 NA  
Rhodamine 6G 180.00 250.00 380.00 1,050.00 NA  
Epoch Eclips Quencher 225.00 250.00 350.00 1,750.00 NA  
EBQ 112.00 135.00 350.00 594.00   4
Pyrene-dU 150.00 175.00 275.00 650.00    
Perylene-dU 150.00 175.00 275.00 650.00 750.00  
C8-Alkyne-dT 150.00 175.00 275.00 650.00    
C8-Alkyne-dC 150.00 175.00 275.00 650.00    
Desthiobiotin TEG 150.00 175.00 275.00 750.00    
N3-Methyl dC 150.00 175.00 275.00 650.00    
N4-Ethyl dC 150.00 175.00 275.00 650.00    
Marina blue 125.00 175.00 250.00 1,250.00 NA  
Azobenzene 125.00 175.00 250.00 1,250.00 NA  


5' Modification
Modification Price/Modification ($) Working
Day
0.05 umole 0.2 umole 1 umole 10 umole 15 umole
DIG 82.50 92.50 142.50 712.50 NA 4
C6 Amine 10.00 25.00 40.00 190.00 NA 4
Phosphate 10.00 25.00 40.00 180.00 NA 4
Biotin 38.00 48.00 95.00 380.00 NA 4
Thiol 70.00 90.00 130.00 690.00 NA 4
C3 spacer 30.00 40.00 65.00 280.00 NA 4
C6 spacer 30.00 40.00 65.00 280.00 NA 4
C12 spacer 30.00 40.00 65.00 280.00 NA 4
18 atom spacer 47.00 55.00 80.00 320.00 NA 4
dS spacer 47.00 55.00 80.00 320.00 NA 4
FAM 56.00 67.00 142.00 565.00 NA 4
TAMRA 140.00 150.00 250.00 975.00 NA 4
HEX 55.00 66.00 138.00 600.00 NA 4
TET 55.00 66.00 138.00 600.00 NA 4
Texas Red 165.00 185.00 285.00 1425.00 NA 4
JOE 165.00 185.00 285.00 1425.00 NA 4
ROX 140.00 150.00 250.00 1250.00 NA 4
Cy5 80.00 100.00 200.00 1050.00 NA 4
Cy3 80.00 100.00 200.00 1050.00 NA 4
IRD700 80.00 100.00 200.00 1050.00 NA 4
IRD800 80.00 100.00 200.00 1050.00 NA 4
C2 Aldehyde 145.00 155.00 240.00 750.00 NA 4
Cy5.5 80.00 100.00 200.00 1050.00 NA 4
Cholesteryl 80.00 100.00 240.00 1200.00 NA 4
Dabcyl 145.00 175.00 240.00 1200.00 NA 4
Ara-dC 80.00 100.00 310.00 Under 3 (Set-up Charge: $200.00)   4
5-F-dU 90.00 110.00 350.00 Under 3 (Set-up Charge: $250.00)   4
2',3'-ddA 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
2',3'-ddC 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
2',3'-ddG 110.00 135.00 330.00 Under 3 (Set-up Charge: $250.00)   4
2',3'-ddT 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
AlexaFluor 488 180.00 200.00 350.00 1750.00   4
AlexaFluor 532 250.00 275.00 430.00 2150.00   4
AlexaFluor 546 250.00 275.00 430.00 2150.00   4
AlexaFluor 594 288.00 325.00 520.00 2600.00   4
AlexaFluor 647 180.00 200.00 350.00 1750.00   4
AlexaFluor 660 288.00 325.00 520.00 2600.00   4
AlexaFluor 750 288.00 325.00 520.00 2600.00   4
N6-methyl-2'-deoxyadenosine 120.00 150.00 220.00 Under 3 (Set-up Charge: $150.00)   4
PC (photo-cleavable) Amine Linker 120.00 150.00 220.00 Under 3 (Set-up Charge: $150.00)   4
PC (photo-cleavable) Biotin Linker 120.00 150.00 220.00 Under 3 (Set-up Charge: $250.00)   4
DNP (2,4-dinitrophenyl)-TEG 125.00 175.00 275.00 Under 3 (Set-up Charge: $150.00)   4
Cy3.5 180.00 250.00 380.00 1050.00   4
3'-dA 250.00 275.00 350.00     4
3'-dC 250.00 275.00 350.00     4
3'-dG 250.00 275.00 350.00     4
3'-dT 250.00 275.00 350.00     4
5-Nitroindole 125.00 175.00 250.00 450.00   4
2'-F-rA 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
2'-F-rC 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
2'-F-rG 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
2'-F-rU 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
Maleimide 50.00 65.00 95.00 350.00   4
2-Aminopurine 75.00 90.00 125.00 Under 3 (Set-up Charge: $150.00)   4
2,6-Diaminopurine 75.00 90.00 125.00 Under 3 (Set-up Charge: $150.00)   4
Dithiol 150.00 175.00 275.00 1500.00   4
BHQ2 180.00 220.00 330.00 900.00   4
EDTA-C2-dT 120.00 150.00 275.00 Under 3 (Set-up Charge: $250.00)   4
Thymidine Glycol 150.00 175.00 275.00 Under 3 (Set-up Charge: $150.00)   4
Zebularine 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
5' Methylene Blue 150.00 175.00 275.00 Under 3 (Set-up Charge: $250.00)   4
5' AMCA (amino-methyl-coumarin-acetate) 125.00 175.00 275.00 Under 3 (Set-up Charge: $150.00)   4
5' Deoxypurine (2’-DeoxyNebu larine) 75.00 90.00 125.00 Under 3 (Set-up Charge: $150.00)   4
5' PEG-2000 inquire {C} inquire {C} inquire {C} inquire {C}   4
5' -BromoHexyl (Br) 150.00 175.00 275.00 1,500.00   4
5' Acridine 125.00 175.00 275.00 Under 3 (Set-up Charge: $150.00)   4
5' Acrylamide (acrydite) 90.00 110.00 350.00 1,250.00   4
5' -Yakima Yellow 250.00 275.00 350.00 Under 3 (Set-up Charge: $150.00)   4
O6-Methyl 2'-dG 75.00 90.00 125.00 375.00 NA  
O4-Methyl-dT 75.00 90.00 125.00 375.00 NA  
5' C3-Amine 50.00 60.00 80.00 240.00 NA  
5' C12-Amine 75.00 90.00 125.00 375.00 NA  
dT-Alkyne 225.00 250.00 350.00 1,750.00 NA  
Rhodamine 6G 180.00 250.00 380.00 1,050.00 NA  
Pyrene-Cap 225.00 250.00 350.00 1,750.00 NA  
Epoch Eclips Quencher 225.00 250.00 350.00 1,750.00 NA  
5'-Hexynyl 50.00 60.00 80.00 240.00 NA  
Pyrene-dU 150.00 175.00 275.00 650.00    
Perylene-dU 150.00 175.00 275.00 650.00    
C8-Alkyne-dT 150.00 175.00 275.00 650.00    
C8-Alkyne-dC 150.00 175.00 275.00 650.00    
AminoOxy 125.00 150.00 220.00 550.00    
Desthiobiotin TEG 150.00 175.00 275.00 750.00    
N3-Methyl dC 150.00 175.00 275.00 650.00    
N4-Ethyl dC 150.00 175.00 275.00 650.00    
5'-OMe-dT 75.00 95.00 150.00 375.00    
C6-Psoralen 225.00 250.00 350.00 1,750.00 NA  
Marina blue 125.00 175.00 250.00 1,250.00 NA  
DBCO TEG 180.00 220.00 330.00 900.00 NA  
Azobenzene 125.00 175.00 250.00 1,250.00 NA  


Internal Modification

Modification Price/Modification ($) Working
Day
0.05 umole 0.2 umole 1 umole 10 umole 15 umole
Internal Amino Modifier C6 dT 108.00 135.00 210.00 840.00 NA 4
Internal Biotin-dT 145.00 155.00 240.00 1200.00 NA 4
Fluorescein dT 145.00 175.00 240.00 1200.00 NA 4
C3 spacer 35.00 45.00 63.00 290.00 NA 4
C6 spacer 35.00 45.00 63.00 290.00 NA 4
C12 spacer 35.00 45.00 63.00 290.00 NA 4
18 atom spacer 45.00 50.00 80.00 320.00 NA 4
dS spacer 47.00 50.00 80.00 320.00 NA 4
Phosphorothioate (per insertion) - 3.00 4.00 20.00 NA 4
5-Methyl dC 47.00 55.00 80.00 320.00 NA 4
Inosine 7.00 8.00 15.00 60.00 NA 4
Deoxy Uridine 7.00 7.50 11.00 55.00 NA 4
2'-O-Methyl 6.00 7.00 14.00 55.00 NA 4
5-Bromo dU 70.00 90.00 130.00 600.00 NA 4
8-Oxo-dA 145.00 175.00 240.00 1200.00 NA 4
8-Oxo-dG 145.00 175.00 240.00 1200.00 NA 4
Ferrocene-dT 145.00 155.00 240.00 1200.00 NA 4
5-hydroxymethyl-dC 145.00 175.00 240.00 1200.00 Under 3 (Set-up Charge: $350.00) 4
5-Hydroxy-dU 145.00 175.00 240.00 1200.00 Under 3 (Set-up Charge: $350.00) 4
5-hydroxymethyl-dU 145.00 175.00 240.00 1200.00 Under 3 (Set-up Charge: $350.00) 4
Ara-dC 80.00 100.00 310.00 Under 3 (Set-up Charge: $200.00)   4
5-F-dU 90.00 110.00 350.00 Under 3 (Set-up Charge: $250.00)   4
N6-methyl-2'-deoxyadenosine 120.00 150.00 220.00 Under 3 (Set-up Charge: $150.00)   4
PC (photo-cleavable)Linker 120.00 150.00 220.00 Under 3 (Set-up Charge: $250.00)   4
DNP (2,4-dinitrophenyl)-TEG 125.00 175.00 275.00 Under 3 (Set-up Charge: $150.00)   4
Cy3 160.00 200.00 350.00 1050.00    
Cy5 160.00 200.00 350.00 1050.00    
Cy3.5 180.00 250.00 380.00 1050.00    
Cy5.5 180.00 250.00 380.00 1050.00    
Puromycine 80.00 100.00 200.00 Under 3 (Set-up Charge: $150.00)    
Yakima Yellow 120.00 150.00 220.00 Under 3 (Set-up Charge: $150.00)    
3'-dA 250.00 275.00 350.00     4
3'-dC 250.00 275.00 350.00     4
3'-dG 250.00 275.00 350.00     4
3'-dT 250.00 275.00 350.00     4
5'-Nitroindole 125.00 175.00 250.00 450.00   4
2'-F-rA 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
2'-F-rC 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
2'-F-rG 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
2'-F-rU 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
2-Aminopurine 75.00 90.00 125.00 Under 3 (Set-up Charge: $150.00)   4
2,6-Diaminopurine 75.00 90.00 125.00 Under 3 (Set-up Charge: $150.00)   4
Dithiol 150.00 175.00 275.00 1500.00   4
EDTA-C2-dT 120.00 150.00 275.00 Under 3 (Set-up Charge: $250.00)   4
Thymidine Glycol 65.00 80.00 115.00 Under 3 (Set-up Charge: $150.00)   4
Zebularine 150.00 175.00 275.00 Under 3 (Set-up Charge: $150.00)   4
Biotin-TEG 50.00 65.00 95.00 380.00 NA 4
HEX-dT 55.00 66.00 138.00 600.00 Under 3 (Set-up Charge: $450.00) 4
Methylene Blue 150.00 175.00 275.00 Under 3 (Set-up Charge: $250.00)   4
Tamra-dT 220.00 250.00 350.00 1,750.00 NA 4
BHQ1-dT 250.00 275.00 350.00 1,750.00 NA 4
BHQ2-dT 250.00 275.00 350.00 1,750.00 NA 4
Dabcyl-dT 250.00 275.00 350.00 1,750.00 NA 4
Deoxypurine (2'-DeoxyNebu larine) 75.00 90.00 125.00 Under 3 (Set-up Charge: $250.00)   4
Azide 150.00 175.00 275.00 1,500.00 NA 4
Trebler Branching 220.00 250.00 350.00 1,750.00 NA 4
O6-Methyl 2'-dG 75.00 90.00 125.00 375.00 NA  
O4-Methyl-dT 75.00 90.00 125.00 375.00 NA  
dT-Alkyne 225.00 250.00 350.00 1,750.00 NA  
Epoch Eclips Quencher 225.00 250.00 350.00 1,750.00 NA  
Thiol-dT 225.00 250.00 350.00 1,750.00 NA  
Cy3 dA 250.00 275.00 420.00 1,950.00 NA  
Cy3 dC 250.00 275.00 420.00 1,950.00 NA  
Cy3 dG 250.00 275.00 420.00 1,950.00 NA  
Cy3 dT 225.00 250.00 350.00 1,750.00 NA  
Cy5 dA 250.00 275.00 420.00 1,950.00 NA  
Cy5 dC 250.00 275.00 420.00 1,950.00 NA  
Cy5 dG 250.00 275.00 420.00 1,950.00 NA  
Cy5 dT 225.00 250.00 350.00 1,750.00 NA  
Pyrene-dU 150.00 175.00 275.00 650.00    
Perylene-dU 150.00 175.00 275.00 650.00    
C8-Alkyne-dT 150.00 175.00 275.00 650.00    
C8-Alkyne-dC 150.00 175.00 275.00 650.00    
Desthiobiotin TEG 150.00 175.00 275.00 750.00    
N3-Methyl dC 150.00 175.00 275.00 650.00    
N4-Ethyl dC 150.00 175.00 275.00 650.00    
Azobenzene 125.00 175.00 250.00 1,250.00 NA  
8-Br-dA 150.00 180.00 250.00 1,250.00 NA  
8-Br-dG 150.00 180.00 250.00 1,250.00 NA  
5-Br-dC 150.00 180.00 250.00 1,250.00 NA  
6-thio-dG 225.00 250.00 350.00 1,750.00 NA  
4-thio-dT 225.00 250.00 350.00 1,750.00 NA  

For Standard oligos pricing, click here.

For orders larger than 96 oligos (High-Throughput) pricing, click here.

For Dual-labeled Probes pricing, click here.


Additional Service Price

Post-Handling Tube Price ($) Plate Price ($)
Concentration normalized-Standard 0.30 0.15 (per well)
Concentration normalized-Custom 0.40 0.20 (per well)
Bar-code Label No Charge No Charge
Dried No Charge No Charge
Aliquoting to daughter Plates 0.40 0.20 (per well)
Mixing primers 0.40 0.20 (per well)
Individual Tube plate-Labeled - 0.40 (per well)
Custom plate - 10.00
Double strand (Annealing service) 30.00/Pair -
MALDI-TOF (QC) No Charge No Charge
MALDI-TOF (SNP or Genotyping) - 2.00 (per well)
Shipping Charge Shipping charge may apply Shipping charge may apply
Hand mix service (MIX base Code) 100.00 (1~250base) 50.00 (1~250base)
Remainder in plate service - 95.00 (96 well Plate),
$ 150.00 (384 well Plate)
Circular ssDNA service 300.00/oligo 225,00 / oligo

 

Custom Analytical Service

Items Tube Price ($) Plate Price ($) large scale
I-E HPLC 50.00 2.50 (per well) 50.00
RP HPLC 50.00 2.50 (per well) 50.00
Capillary electrophoresis 50.00 2.50 (per well) 50.00
PAGE analysis 15.00 1.00 (per well) 15.00
MALDI-TOF analysis, Spectrocheck - 2.00 (per well) -
MALDI-TOF analysis, other mass system Free Free Free

 

Contact Us

E-mail : oligos@bioneer.com.au




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Manual

Treatment for thiol modified oligonucleotides

Anneal complementary pairs of oligonucleotides


MSDS

Oligos


Brochure

Oligonucleotides 2010 Brochure


FAQ

Oligo FAQ


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

]]>

• Dual Labeled Probes


Dual-labeled probes, widely-used for real-time qPCR, normally have a reporter dye at the 5' end and a quencher at the 3'end. Probes can be used for the sensitive quantitative or qualitative detection of genes. By attaching different types of fluorophores multiplex reactions to analyze multiple genes are possible. For quality assurance, Bioneer’s dual-labeled probes are quality controlled through MALDI-TOF mass analysis, and can be lower in cost and faster in delivery compared to competitor offers.


 

Features and Benefits

  • Free Bio-RP purification: Near HPLC purity at a standard oligo price
  • Quick turnaround time: 4 - 5 days from order to bench in most cases
  • Broad range of modifications available: If you don’t see it, just ask, we can probably do it
  • Competitive pricing: Great value for your reseach dollar


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Dual-labeled Probe Price

Modification Synthesis Scale / Price ($) Working Day
0.05 umole 0.2 umole 1 umole 10 umole 15 umole
5'-FAM-3'-TAMRA 165.00 233.00 365.00 1,825.00 NA 4~5
5'-HEX-3'-TAMRA 165.00 233.00 365.00 1,825.00 NA 4~5
5'-TET-3'-TAMRA 165.00 233.00 365.00 1,825.00 NA 4~5
5'-JOE-3'-TAMRA 350.00 400.00 800.00 4,000.00 NA 4~5
5'-FAM-3'-DABCYL 177.00 299.00 465.00 2,325.00 NA 4~5
5'-HEX-3'-DABCYL 195.00 295.00 445.00 2,225.00 NA 4~5
5'-TET-3'-DABCYL 195.00 295.00 445.00 2,225.00 NA 4~5
5'-TAMRA-3'-DABCYL 275.00 375.00 555.00 2,775.00 NA 4~5
5'-JOE-3'-DABCYL 300.00 350.00 555.00 2,200.00 NA 4~5
5'-FAM-3'-BHQ1 175.00 250.00 375.00 1,875.00 NA 4~5
5'-HEX-3'-BHQ1 220.00 315.00 470.00 2,350.00 NA 4~5
5'-TET-3'-BHQ1 210.00 295.00 445.00 2,225.00 NA 4~5
5'-JOE-3'-BHQ1 350.00 400.00 600.00 3,000.00 NA 4~5
5'-TAMRA-3'-BHQ1 300.00 350.00 550.00 2,200.00 NA 4~5
5'-ROX-3'-BHQ1 275.00 320.00 520.00 2,080.00 NA 4~5
5'-Texas Red-3'-BHQ1 275.00 320.00 520.00 2,080.00 NA 4~5
5'-Cy3-3'-BHQ1 400.00 450.00 650.00 2,600.00 NA 4~5
5'-FAM-3'-BHQ2 175.00 250.00 375.00 1,875.00 NA 4~5
5'-HEX-3'-BHQ2 220.00 315.00 470.00 2,350.00 NA 4~5
5'-TET-3'-BHQ2 210.00 295.00 445.00 2,225.00 NA 4~5
5'-JOE-3'-BHQ2 350.00 400.00 600.00 3,000.00 NA 4~5
5'-TAMRA-3'-BHQ2 350.00 380.00 570.00 2,850.00 NA 4~5
5'-ROX-3'-BHQ2 350.00 380.00 570.00 2,850.00 NA 4~5
5'-Texas Red-3'-BHQ2 350.00 390.00 625.00 3,125.00 NA 4~5
5'-Cy5-3'-BHQ2 275.00 320.00 480.00 2,400.00 NA 4~5
5'-Cy3-3'-BHQ2 275.00 320.00 480.00 2,400.00 NA 4~5
5'-FAM-BHQ1-dT-Amine-3' 375.00 450.00 650.00 2,650.00 NA 4~5
5'-FAM-Tamra-dT-PO4-3' 375.00 450.00 650.00 2,650.00 NA 4~5

* Please enquire Bioneer’s technical staff for Dual-labeled Probe other than those listed above.


For Standard oligos pricing, click here.

For orders larger than 96 oligos (High-Throughput) pricing, click here.

For Modification oligos pricing, click here.

 

Contact Us

E-mail : oligos@bioneer.com.au

]]>
Manual

Treatment for thiol modified oligonucleotides

Anneal complementary pairs of oligonucleotides


MSDS

Oligos


Brochure

Oligonucleotides 2010 Brochure


FAQ

Oligo FAQ


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

]]>
Combination of Dual Probe

Dye Excitation max (nm) Emission max (nm) Compatible Quencher
Dabcyl tamra BHQ1 BHQ2
6-FAM 494 520        
JOE 529 555  
TET 521 541  
HEX 535 553    
VIC 538 554      
Cy3 546 563      
NED 546 575    
TAMRA 556 580      
Cy3.5 581 596      
ROX 588 608      
Texas Red 598 617      
Cy5 646 662      
Cy5.5 675 694      
IR700 685 705        
Cy7 743 767        
IR800 787 807        
DABCYL 478 -  
BHQ-1 534 -
BHQ-2 534 -

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• Extendamers™



Features and Benefits

  • Bio-RP purification or PAGE purification: Only full length oligos
  • Use for a variety of applications: Ideal for cloning, gene construction and ddRNAi
  • Competitive pricing: Great value for your research dollar
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Extendamers™ Price

Price/Base ($) Base Limitation (mer) Purification ($) Guaranteed Yield (nmole) Working Day
BioRP PAGE BioRP PAGE BioRP PAGE
0.95 130 - 200 Free 75.00 3 ~ 4 0.25 ~0.3 5 - 6 7 - 8

* The synthesis scales refer to the initial starting point for a synthesis. The starting synthesis scale and the length of the oligo will influence the final yield.


For Standard oligos pricing, click here.

For orders larger than 96 oligos (High-Throughput), click here.

For Modification oligos pricing, click here.

For Dual-labeled Probes pricing, click here.


Extendamers™'s Modification Price

Modification Price ($)
5'-Phosphate 25.00
5'-Biotin 48.00
5'-Amine 25.00
5'-Fluorescein 67.00
5'-Tamra 150.00
Inosine 8.00
]]>
Manual

Treatment for thiol modified oligonucleotides

Anneal complementary pairs of oligonucleotides


MSDS

Oligos


Brochure

Oligonucleotides 2010 Brochure


FAQ

Oligo FAQ


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

]]>

• Large Scale Oligos


Large scale oligos ranging from mg to gram scales – wide range of modifications available

Bioneer’s production facilities can accommodate large scale oligonucleotide synthesis orders ranging from milligrams to tens of grams of the purest DNA and RNA oligos, including both standard and modified. A large portion of our bulk oligo customers are involved in research requiring antisense oligos, which has opened the door to new approaches in the development of pharmaceuticals and target validation. Some of the frequently used modifications are:


Phosphorothioates and Chimeric Oligos:

General oligonucleotides are subject to rapid degradation by nucleases. Therefore, oligos for antisense application are usually synthesized with a phosphorothioate bond modification to make them resistant to nuclease activity. In phosphorothioates, a sulfur atom replaces a binding oxygen in the oligo phosphate backbone.


2'O-Methyl RNA oligos:

2'O-Methyl RNA increases nuclease stability and affinity of the antisense oligo to the target RNA.


Features and Benefits

  • Free Bio-RP purification: Near HPLC purity at a standard oligo price
  • Broad range of modifications available: If you don’t see it, just ask, we can probably do it
  • Competitive pricing: Great value for your research dollar

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Large Scale Oligonucleotide Synthesis

DNA Price

Final yield (mg) DNA Price ($) DNA Price ($)
(BioRp) (HPLC)
50 $1,250.00 $1,500.00
100 $1,450.00 $1,750.00
250 $2,000.00 $2,200.00
500 $3,500.00 $3,700.00
1,000 $5,500.00 $5,700.00


S-DNA Price (Phosphorothioate)
Final yield (mg) S-DNA Price ($) S-DNA Price ($)
(BioRp) (HPLC)
50 $1,750.00 $1,950.00
100 $2,030.00 $2,250.00
250 $2,800.00 $3,000.00
500 $4,900.00 $5,100.00
1,000 $7,700.00 $7,900.00

Please enquire Bioneer’s technical support for Large Scale Oligonucleotide Synthesis other than those listed above.

Contact Us

E-mail : oligos@bioneer.com.au

 


]]>
OVERVIEW of BIONEER QA/QC

1. Introduction
2. Custom Analytical Service
3. Custom Analytical Service for Antisense Oligonucleotide
4. MALDI-TOF QC System
5. HPLC
6. GC
7. NMR
8. Test of Heavy Metal Content
9. Test of Water Content
10. Bioburden test
11. Endotoxin test


Introduction

At Bioneer, quality control is fundamental to our manufacturing processes and guarantees high quality product. Bioneer's Quality Control for Oligonucleotides can be divided into three distinct areas:

1. Bioneer's Olignucleotide Ordering Systems:
Orders from customers are gathered on a main production server system prior to synthesis. To eliminate re-entry errors, on-line and e-mail orders are recommended. Orders are automatically distributed (batched) to an appropriate synthesizer according to the length of oligo, the type of modification, and users’ plate choice. Every lot to be synthesized is labeled with its own Barcode ID, which is used for identifying the oligonucleotide plate through the synthesis process. Bioneer's Quality Assurance Staff can monitor all procedures from synthesis to aliquoting using our proprietary Automatic Oligonucleotide Production System (AOP System).

2. Automatic MALDI-TOF QC:
Bioneer employs multiple MALDI-TOF mass spectrometers that are fully automated from loading to mass determination. The mass spectrometry data for each sample is automatically inserted into the oligo information sheet. Bioneer is one of the few oligo producers that checks all oligonucleotides (single and high throughput orders) by MALDI-TOF and provides mass data with each oligo, free of charge.


Figure 1. Typical Oligo Datasheet with MALDI-TOF Information



Figure 2. Examples of a typical 30 mer and 23 mer oligo spectrum, in this case employing a Kratos MALDI-TOF system.


Figure 3. Example of High Throughput Plate QC Analysis.

The mass spectrum and result of 92 (plate) oligonucleotides – Bioneer can also provide “spectrochecked” oligo QC data for users of the Sequenom SNP Analysis System.

3. QC of Large Scale, Antisense and Decoy Oligonucleotides:
The high quality oligonucleotides used in gene therapy and other therapeutic-type applications obviously require more stringent QC. Bioneer has developed specialized QC methods for large scale, antisense and decoy oligonucleotides. These specialized QC procedures comprise HPLC, CE, gel electrophoresis, NMR and additional specific tests such as endotoxin, bioburden, moisture content and etc. Bioneer's wide array of Q.C. procedures satisfies all of our users' specific QC requirements. The array of QC steps available from Bioneer is as follows:

1. Ion-Exchange HPLC analysis
2. Reverse Phase HPLC analysis
3. Capillary Electrophoresis
4. NMR analysis
5. Moisture content analysis
6. Sodium content analysis
7. Heavy metal content analysis
8. Solvent content analysis
9. Endotoxin test
10. Bioburdent test

Bioneer can also supply reports of API stability testing under the contract period. For information on pricing and ordering, as well as additional information on any of Bioneer's specialized QC procedures, please e-mail  oligos@bioneer.com.au .


Custom Analytical Service

Items Tube Price ($) Plate Price ($) large scale
I-E HPLC 50.00 2.50 (per well) 50.00
RP HPLC 50.00 2.50 (per well) 50.00
Capillary electrophoresis 50.00 2.50 (per well) 50.00
PAGE analysis 15.00 1.00 (per well) 15.00
MALDI-TOF analysis, Spectrocheck - 2.00 (per well) -
MALDI-TOF analysis, other mass system Free Free Free
Data will be provided on CD or paper.


Custom Analytical Service for Antisense Oligonucleotide

Items Tube Price ($) Plate Price ($) large scale
I-E HPLC 50.00 2.50 (per well) 50.00
RP HPLC 50.00 2.50 (per well) 50.00
Capillary electrophoresis 50.00 2.50 (per well) 50.00
PAGE analysis 15.00 1.00 (per well) 15.00
MALDI-TOF analysis, Spectrocheck - 2.00 (per well) -
MALDI-TOF analysis, other mass system Free Free Free
NMR analysis - - inquire
Moisture content analysis - - inquire
Metal content analysis - - inquire
Solvent content analysis - - inquire
Endotoxin test (LAL) - - inquire
Bioburden test - - inquire


MALDI-TOF QC System

The Use of Matrix-Assisted Laser Desorption / Ionization Time of Flight Mass Spectrometry of Synthetic Oligonucleotide QC
At Bioneer MALDI-TOF (Matrix Assisted Laser Desorption-Ionization Time of Flight) is the technology used extensively for failure detection and other problems that cannot be resolved by other methods. Bioneer's fully automated, high throughput QC systems allow the company to provide superior, high quality product superior to that of our competitors. The QC systems installed at Bioneer currently can check the quality of 35,000 synthetic oligonucleotides per day. Each and every oligo is supplied with an oligo data sheet that includes MALDI-TOF mass spectrum.

Interpreting MALDI-TOF Mass QC for Oligonucleotide
A MALDI-TOF mass spectrometer accurately measures molecular weight of a sample. The technique is most useful because it compares the theoretical mass calculated on the basis of oligonucleotide sequence to actual measured data. MALDI-TOF can also be used to check for sequence errors that may occur while inputting sequences. Such a QC method is an absolute requirement for sequence dependent experiments, such as PCR, cloning and sequencing. It can also be used to check whether an oligo has been modified correctly. CE or HPLC analysis cannot be used to check modifications. MALDI-TOF is also used to check for the presence of truncated oligonucleotides and salt contamination.

A MALDI-TOF mass system is most suitable for the QC of oligonucleotides less than 50 bases long. Longer oligonucleotides (> 50 mer) cannot be ionized effectively (100%) by the laser, therefore they cannot be easily detected and therefore will show a poor detection signal that may fail QC. At Bioneer any oligo greater than 50 bases in length are checked for quality by PAGE. PAGE QC data sheets are provided with each oligo > 50 bases.


The Bioneer QC system

The customer order data is initially saved on the main server system and then transferred to synthesis. Following synthesis, oligonucleotides are spotted on MALDI-TOF mass plates using a proprietary, fully automated, 384-well sample OD quantification/ dispensing robot developed by Bioneer. The MALDI plates are then transferred to QC Division. Any transfer of oligo samples and plates between different divisions and/or equipment requires the bar-code on each sample racks to be checked by a production specialist to confirm the oligo data. Bar coding ensures compliance and allows related divisions to easily retrieve important oligo data from the main server system.
After receiving the oligonucleotides and all the related information, the QC department checks the quality of the oligonucleotides. The mass spectrum of each oligo is saved and the QC program checks whether the oligonucleotides have been synthesized appropriately. Upon completion the final QC data is transferred to the main server.
The Bioneer QC Program is also used to confirm oligo contaminants (including truncated oligonucleotides) present in the MALDI spectra. Another key advantage of Bioneer's QC system is its ability to automatically insert mass spectra (0.6X mass ~ 1.3X mass) of each oligo into the oligo data sheet. Mass spectrum for all ordered oligonucleotides will be provided to customers at no extra charge.
Please note that since the Sequenom Spectrocheck system, which is applicable for some SNP users employs its own program for oligo QC, $100 USD will be charged for every 96 samples if this QC system is required. Mass spectrum data of examined samples can be provided on a CD if required.

MALDI-TOF data is delivered from QC to the main server, and subsequently all the related information is delivered to Packaging so that the correctly synthesized samples will be delivered in the appropriate format as requested by the customer. Bioneer delivers oligonucleotides in a selection of different tubes, 96-well plates, or 384-well plates as per the customers' preferences. After packaged completely, all the oligonucleotides will be shipped by FedEx or UPS, and via their tracking systems, customers may monitor the exact place where the ordered oligonucleotides are in transportation.
In QC, data on all failed samples is automatically returned to synthesis and the re-synthesis of the failed oligonucleotides proceeds whilst QC examines the failed oligo further. This rapid exchange of related information is a key to Bioneer's rapid oligo turnaround time.


HPLC

HPLC Analysis of Oligo Purity

Reverse Phase HPLC

At Bioneer Reverse Phase HPLC is mostly used to QC of intermediates or single stranded DNA produced in the oligo synthesis process. It is a simple QC technique for modified oligo with hydrophobic groups. Reverse Phase is faster and cheaper than Ion Exchange methods and requires less sample.


Figure 4. Example of oligo (26 mer) purity analysis using a Reverse Phase (C-18) Column.

Purity Analysis using Ion-exchange Chromatography Method (using Anion-exchange column)
HPLC, equipped with a DIONEX's DNAPac column, is used to QC of oligonucleotides, in particular - Decoy oligonucleotides. The high resolution capability of Ion-exchange can easily separate single stranded DNA and double stranded DNA. At Bioneer Ion-exchange chromatography is commonly used to QC decoy oligonucleotides, and plays a key role in QC confirmation with strict QC standards required for gene therapy.


Figure 5. Double stranded DNA (DS DNA) test.
Double stranded oligonucleotides are used for decoy or EMSA experiments. Prior to any experiments, the formation of DS DNA must be checked. For decoy experiments used in the development of new drugs, it is necessary to check the ratio of DS DNA in the decoy. In order to guarantee the medical efficacy, the medicine should be formed in decoy like API from the start of drug development. DS DNA confirmation is an FDA requirement.



GC

Product Purity Test Under Gas Chromatograph
Gas Chromatograph (GC) is used to QC for solvent content in Decoy oligonucleotides and S-oligos used in gene therapy. Prior to administering any oligo based drug to humans it is vitally important to check for the presence of residual organic solvents that may remain after synthesis and purification. Solvent content may compromise efficacy and cause unwanted side effects. The types of residual organic solvents that may be present include acetonitrile, pyridine and toluene etc. Concentrations should be minimally less 0.1%.


Figure 6. Standard solvent data.


Figure 7.Solvents confirmation data in antisense oligonucleotide



NMR – Spectroscopy

Nuclear Magnetic Resonance (NMR) spectrometer plays a very important role in understanding 3-dimensional structures of molecules. With increasing interests in the structure of biological materials, the use of NMR spectrometer is expanding into new areas, such as drug development, DNA analysis, human genomic and proteomic research and so on. NMR is commonly used to determine physical structure at the molecular level.

At Bioneer NMR is used for 31P-NMR measurement to compare typical frequency values for phosphates present in DNA backbones. By comparing actual frequencies with theoretical it is possible to check the state and purity of phosphates in synthetic oligonucleotides.


Heavy Metal Testing

For antisense and decoy oligonucleotides that are directly injected into animals or humans as medicines in the pre-clinical or clinical phase, it is necessary for check for heavy metal groups that may influence the efficacy or may cause side effects. The types of heavy metals that require QC may differ in each oligo. Inductively Coupled Plasma-Optical Emission Spectrometers (I.C.P), Atomic Absorbance Spectrophotometers (AAS) and I.C.P Mass Spectrometers are routinely employed to QC oligonucleotides for heavy metal groups. Upon request, Bioneer's oligonucleotides can be checked quantitatively/qualitatively for metals such as Lead, Nickel and Fe etc.


Water Content Analysis

Bioneer can also QC oligonucleotides for water content. A Sartorius’ Water Content Measurement instrument (MA-30) is employed to measure water contents that may remain in synthesized antisense oligo following the final drying step of the oligo purification process.


Bioburden Testing

Bioneer confirms the sterility of an aseptic oligo production environment by routinely conducting microbial testing of the water used in the synthesis process and final aliquoting steps. Susceptible areas of potential microbial contamination in the synthesis process and the environment, including operators are also checked periodically. Prevention ensures that the final oligonucleotides will be proven to be safe and free from microbial contaminations.


Endotoxin test

Bioneer also utilizes a Kinetic Chromogenic Analysis (KCA) method to confirm that the oligonucleotides are free of any exothermic materials. Generally exothermic materials present in injectable therapeutics are endotoxins from microbial contamination, especially from Gram negative bacterial contamination and must be avoided.

Kinetic Chromogenic Analysis (KCA) is based on an enzyme linked color reaction (limulus Amoebocyte Lysate reaction). The presence of endotoxins is quantified by measuring color of the reaction against known standards. Many samples can be quantified simultaneously using a standard micro-plate reader. KCA is a fast, cost-effective and short measurement. With such a method, Bioneer only provides oligonucleotides with less than 0.25 EU/ml for therapeutic applications.



OVERVIEW of BIONEER QA/QC

All oligonucleotides synthesized by Bioneer are purified using the Bio-RP purification system. This uses the oligo purification cartridge (OPC) technology and generates oligonucleotides that are 85% pure. This service is available free of cost on all oligonucleotides. We also offer HPLC and PAGE purification.

Bio-RP Purification
The Bio-RP cartridge functions on a basic trityl on selection. In addition to a de-salting, it removes most of the truncated products. This technology yields oligonucleotides that are superior in purity than that obtained by standard ethanol precipitation or gel filtration.

PAGE Purification
PAGE purification is recommended for oligonucleotides between 50-100 bases. This yields oligonucleotides with purity levels over 95% purity. Subsequently yield obtained is lower than other purification techniques.

HPLC Purification
HPLC is recommended for both modified and unmodified oligonucleotides up to 50 bases in length. Our HPLC purifications always start with a trityl on purification, and are often followed by a second full gradient trityl off HPLC. This is our Double RP-HPLC Purification process that gives an extra level of purification. In some cases, the initial trityl-on purification is entirely sufficient and a cartridge is utilized in the subsequent trityl-off oligo processing. This RP-HPLC purification process can yield highly pure material, especially when the oligonucleotide is not complex. When synthesizing compounds that require post-synthetic modification, such as dye labeling, we will perform an additional RP-HPLC purification.


 

 











 

]]>
Manual

Treatment for thiol modified oligonucleotides

Anneal complementary pairs of oligonucleotides


MSDS

Oligos


Brochure

Oligonucleotides 2010 Brochure


FAQ

Oligo FAQ


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate
]]>

• Custom RNA


Quality custom RNA synthesis up to 35-mer with complimentary MALDI-TOF QC

Bioneer’s core competency in delivering the most rigorously manufactured nucleic acids, includes providing the industry’s highest quality Custom RNA oligos. To cover all of your bases, we manufacture RNA oligos with our patented Bio-RP purification which approaches near HPLC quality. For your most stringent applications, we offer a wide array of modification options and services including bar-code labeling and annealing chimeric RNA/DNA oligos. Please find the chart in the ordering information tab detailing our guaranteed yield, available modifications, purification, and service options

 

Features and Benefits

  • Ease of use: Just add template and primers and start your PCR, dNTPs, buffer and enzyme are provided
  • Stability: Stable at room temperature for a month and for 2 years in a -20°C freezer
  • Gel loading: Available with or without a tracking dye for ease of use
]]>
Custom RNA Synthesis

Cat. No. Guaranteed Yield Base Limitation Base Price BioRP HPLC
SR-1001 10 nmole 30 mer $3.00 Free $40.00
SR-1002 20 nmole 30 mer $5.00 Free $50.00
SR-1003 50 nmole 30 mer $8.00 Free $60.00
SR-1004 100 nmole 30 mer $13.00 Free $70.00
SR-1005 10 nmole 31 - 35 mer* $4.50 Free $40.00
SR-1006 20 nmole 31 - 35 mer* $7.50 Free $50.00
SR-1007 50 nmole 31 - 35 mer* $12.00 Free $60.00
SR-1008 100 nmole 31 - 35 mer* $19.50 Free $70.00

* HPLC purification recommended for RNA oligos > 30 bp


Modification for Custom RNA

Modification 10 nmole 20 nmole 50 nmole 100 nmole
5'-Fluorescein $80.00 $90.00 $120.00 $170.00
5'-Phosphorylation $50.00 $60.00 $75.00 $120.00
5'-Biotin $80.00 $90.00 $120.00 $170.00
5'-Amine $50.00 $60.00 $75.00 $120.00
5'-Cy3 $230.00 $290.00 $340.00 $440.00
5'-Cy5 $230.00 $290.00 $340.00 $440.00
 5'-Cy5.5 $276.00 $348.00 $456.00 $576.00
5'-TAMRA $180.00 $220.00 $260.00 $340.00
5'-Thiol $100.00 $120.00 $150.00 $210.00
5'-PEG 2000 Inquire Inquire Inquire Inquire
 3'-Cy5.5 $276.00 $348.00 $456.00 $576.00
3'-Fluorescein $80.00 $90.00 $120.00 $170.00
3'-Phosphorylation $60.00 $70.00 $85.00 $130.00
3'-Cholesterol $130.00 $130.00 $130.00 $130.00
3'-Biotin $130.00 $150.00 $180.00 $250.00
3'-Amine $60.00 $70.00 $180.00 $130.00
3'-TAMRA $180.00 $220.00 $260.00 $340.00
3'-Thiol $100.00 $120.00 $150.00 $210.00
3'-DABCYL $180.00 $220.00 $260.00 $340.00
3'-PEG 2000 Inquire Inquire Inquire Inquire
Chimeric DNA Bases $0.50 $0.80 $1.20 $2.00
Internal Phosporithioate - $5.50 $9.00 $12.00
Internal 2'-OMe $12.00 $17.00 $25.00 $35.00
Internal 2'-F(A) $40.00 $50.00 $60.00 $80.00
Internal 2'-F(C) $40.00 $50.00 $60.00 $80.00
Internal 2'-F(G) $40.00 $50.00 $60.00 $80.00
Internal 2'-F(U) $40.00 $50.00 $60.00 $80.00
Internal Deoxy Bases $70.00 $90.00 $110.00 $150.00
Internal Inosine $25.00 $30.00 $40.00 $50.00
 
 

Optional Post-Synthesis Handling Services for custom RNA

Services Tube Price
Concentration normalized - Standard $0.30
Concentration normalized - Custom $0.40
Bar-code label No Charge
Dried No Charge
Double strand $30.00
MALDI-TOF (QC) No Charge


RNA Oligo Turnaround Time

Oligo Type Turnaround Time
No modifications + BioRP or HPLC 10 business days
Modifications + BioRP 10 business days
Modifications + BioRP 10 business days

* For stocked modifications.

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Mamual

Protocol for siRNA annealing

siRNA_user manual


MSDS

Oligos


Brochure

Oligonucleotides 2010 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

ISO 9001:2008 - certificate

EN ISO 13485:2003 / AC:2009 - certificate

EC Directive 98/79/EC - certificate

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Apply for a Regular Individual Account


Apply for a Regular Individual Account
 
Attach and send
Upload:
 
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Apply for an Institutional Account


Apply for an Institutional Account
 
Attach and send
Upload:
 
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Bioneer Registration


Magnetic Beads


AccuBead™ Silica Coated Magnetic Bead


Spherical-shaped magnetic beads for superior results


Many research institutes and industries are applying magnetic beads into their applications. They use this material either for cell-based experiments or nucleic acid purification for disease monitoring as well as developing treatments (among other uses). Bioneer's magnetic beads have an average diameter of 1.29 um with a range of 1~5 um diameter and can be coated with
a variety of functional groups. The functional groups allow binding of, for example, DNA, RNA, protein or specific cells.
By using an external magnetic field, the magnetic beads can be separated with their bound products for isolation and purification.

 

Features and Benefits

Bead Size:
The average particle size of silica coated magnetic beads is 1-5 um. AccuBead™ provides the optimal size for attaching
bio-molecules for research, purification and functional studies.

Shape and Uniformity:
AccuBead™ s completely spherical unlike most other magnetic beads. The average particle size distribution is comparatively uniform, and the smooth surface eliminates carryover of impurities common to rough-surfaced beads.

Efficiency:
Because the silica magnetic beads are spherical and uniform, DNA/RNA or protein purification can be performed with
outstanding efficiency and reproducibility.
The magnetic property of the bead allows an external magnetic field to be applied for quick separation.

Reproducibility:
Each batch is produced under strict quality controls. Errors that commonly occur during mass production are eliminated during
the individual packaging process. Bioneer's current batch processing system allows for the production of more accurate and reproducible end-product yield.

Stability:
The product is stable for 3 years under appropriate storage conditions. (Ultra-pure water or buffer – room temperature; Streptavidin Magnetic Beads & Biotin Magnetic Beads – refrigerated).

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Applications

Magnetic DNA/RNA Purification
Magnetic Protein Separation
Magnetic Antibody Separation
Magnetic Cell Isolation


Patents

Patent pending: KR Patent 10-2008-0013545
Patent registered: KR Patent 10-1053023
Patent pending: WO 2009/102171 A2
Patent pending: US 2011/0054162 A1


FE-SEM Images of Magnetic Beads

Figure 1. FE-SEM image of magnetic particles for nucleic acid purification.
The uniformity of the magnetic beads can be seen in the micrograph.

Figure 2. FE-SEM magnification image of magnetic beads.
SEM images show complete silica coating of the iron oxide nano particles in spherical form.


Size Distribution and Zeta Potential Diagram of Magnetic Beads



Figure 3. Size distribution diagram and zeta potential of silica coated magnetic beads.
The average size of magnetic beads is approximately 1.56 µm and zeta potential is -39.8 mV due to the hydroxyl group on the surface of the silica.


Magnetic Beads are a highly efficient tool for DNA isolation

DNA/RNA affinity to magnetic beads (uniform-dispersed super-paramagnetic particles) is used for separation.
Magnetic beads are mixed with naked DNA/RNA in high-salt-containing buffer.
DNA/RNA is bound to magnetic beads via a salt bridge.
By magnetic separation, highly enriched DNA/RNA preparations are obtained in a matter of minutes.
Magnetic beads are highly suitable for automation since it requires no centrifugation or vacuum filtration procedures.

First, subject the biological samples to a lysis reaction and place the magnetic beads in the mixture to combine the free DNA together with magnetic beads. Fix magnetic beads with an external magnetic field to wash the solution and then elute
the DNA or RNA from the magnetic beads. Using magnetic beads to for purification is much faster than other methods such as gravity columns or centrifugation.


Figure 4. DNA separation workflow using silica coated magnetic beads.


Electrophoresis Results of purified DNA


Figure 5. Electrophoresis image of silica coated magnetic bead-purified genomic DNA (amplified).


Comparison of viral RNA Prep Kit Quality


Figure 6. Comparison of viral RNA Prep Kit Quality using WHO HIV-1 working standard (PWS-1,2,3) serums.
Superior results are shown when using the AccuPrep™ Viral RNA Kit made with AccuBead™ Silica Coated Magnetic Beads.







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Brochure

AccuBead™ PDF Brochure
 

MSDS

AccuBead™ Silica Coated Magnetic Beads MSDS

Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003/AC:2009 - certificate

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Silica Coated Magnetic Beads can be used for the separation of DNA/RNA, protein and cells.
Package sizes of Magnetic Beads are 1g, 5g and 10g. For research use only.

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• AccuGeneBlock Service


Up to 1 Kb DNA fragment, with Fast Turnaround Time

AccuGeneBlock Service provides synthesis of double strand DNA fragments (less than 1 kb) in as little as 3 days. It is a brand new service offered by Bioneer, a leader in Gene Synthesis. AccuGeneBlock service provides you with your gene fragments at a great price with fast turnaround time so you can use it easily and quickly in synthetic biology research.

AccuGeneBlock products are supplied to you as 200 - 500 ng of lyophilized DNA fragments. The 5' ends are not phosphorylated, and there is a 3' A overhang for TOPO cloning as the default – Note that you may specify blunt-ends if you choose. Sequence verification is available on request.

AccuGeneBlocks are a low-cost alternative to Gene Synthesis and provide you with high quality DNA – Fast! They are the most convenient and affordable gene construction and/or modification tool available, and make synthetic biology methodology affordable and efficient for every lab.


Features and Benefits

Value Pricing
The best value for your research dollar ($95.00 for <500 bp)

Accurate and Fast Synthesis
Fully Automatic Synthesis makes it possible to synthesize high-quality genes in as little as 3 days

Easy Protein Synthesis
Gene fragments can be used for Protein Synthesis with PCR templates using ExiProgen

Synthesis of large Genes
You may combine multiple AccuGeneBlocks in order to synthesize large Genes through Cloning,
Gene Assembly methods, etc.

Codon Optimization - Free of charge!
Complimentary codon optimization on request to enhance protein expression and functionality


Applications

Synthesis of large genes
It is possible to make the larger genes by combining multiple AccuGeneBlocks through cloning, Gene Assembly methods, etc. using the double strand DNA provided.

Protein Modification
Codon optimization can increase protein expression levels, and a mutant library derived from this process can provide proteins with enhanced function. Optimizations include the removal of secondary structure and/or repeat reduction, as well as optimization for expression in different organisms.

Antibody Construction
Antibodies which target specific diseases or proteins can be codon-optimized for maximum expression in the host organism. Also, an antibody library can be constructed to screen for the best antibody variant.

Organism Production Optimization
Optimization of gene expression to maximize the efficiency and yield of industrial biological production facilities

Gene Construction
Easy production of hard-to-clone DNA sequences.


Schematics of Gene Synthesis Process


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AccuGeneBlock Service
Price for Synthesis <500 bp $95.00 (sequencing excluded)
501~1000 bp $95.00 ( + $29.00/100 bp) (sequencing excluded)
Period of Synthesis <500 bp 3~5 working days
501~1000 bp 4~6 working days
Delivery Form 200 ~ 500 ng of lyophilized PCR product
Additional Service Sequencing <500 bp ($20.00)
501-1000 bp ($40.00)
Increased Quantity 1 ug/$50.00
Codon optimization Free-of-Charge (via Email ordering only)

AccuGeneBlock Service may not be available if the gene sequence contains high or low GC content, repeatitive sequence,
homo-polymeric runs, etc. In these instances please use Bioneer's Gene Synthesis Service.
Available for gene of <1 kb in size.
Double-Stranded DNA with a single 3' A overhang is provided as a default. Blunt-ended DNA is available upon request.
Ordering through email is required for a gene with codon optimization.








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Manual

MSDS


Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards

]]>

AccuPower® Pfu PCR PreMix


Master mix for DNA amplification requiring high fidelity capability


AccuPower® Pfu PCR PreMix is a lyophilized mixture of Pfu DNA polymerase, dNTPs and reaction buffer in a convenient premix format. Simply add template, primers and water and mix – AccuPower® offers easy set-up for every PCR application. Bioneer's patented stabilizer maintains the activity of the PreMix for over a month when stored at room temperature (25°C) and for over 2 years in the freezer (-20°C).

 

Features and Benefits

   High fidelity : AccuPower® Pfu PCR PreMix is a high fidelity (error rate = 1.9x10-6)enzyme that will reduce errors during DNA amplification.

   High purity : AccuPower® Pfu PCR PreMix is a recombinant enzyme that eliminates smearing and unwanted background found in native Pfu enzymes.

   Thermostability : Pfu has an optimal activity that is higher than most other thermostable polymerases, and exhibits low activity at temperatures below 50°C. This   results in higher specificity for your PCR reactions.

   Stability : To preserve the activity during storage, the PCR PreMix has been freeze-dried with a special stabilizer. Bioneer's unique stabilizing agent maintains the DNA polymerase activity for over 2 years in the freezer (-20°C).

   Simplicity : Almost all of the reaction chemicals required for PCR, such as thermostable DNA polymerase and dNTPs, are premixed into a single unit. The user simply adds template DNA, primers, and ddH2O to start the reaction. A tracking dye and polymers for gel electrophoresis are also included in the mixture so there is no need to add any sample loading buffer.

   Reproducibility : AccuPower® products are manufactured under strict ISO 9001 quality control conditions to ensure reproducible PCR performance, experiment after experiment.


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Specifications

5' to 3' exonuclease activity: No
3' to 5' exonuclease activity: Yes
3' – A Overhang: No
Fragment Size: Up to 10 kb


Application

- Gene synthesis
- Gene cloning
- Primer extension
- Site directed mutagenesis

- High-fidelity PCR


Storage Temperature

-20°C


Experimental Data

Figure 1. AccuPower® Pfu PCR PreMix Sensitivity test
AccuPower® Pfu PCR PreMix was tested with serial dilutions of Lambda DNA template. (The PCR product size is 1 kb) The cycling conditions were 95°C for 5min, 30 cycles of 95°C for 30 sec, 55°C for 30 sec, and 72°C for 1 min, and 72°C for 5 min for final extension

M: 100 bp DNA Ladder (Cat. No. D-1030)
Line 1: 10ng Line 5: 1pg,
Line 2: 1ng Line 6: 100 fg,
Line 3: 100pg Line 7: 10 fg,
Line 4: 10pg Line 8: No Template




Figure 2. AccuPower® Pfu PCR PreMix sensitivity test with serial dilutions of Human DNA template.
The cycling conditions were 95°C for 5min, 30 cycles of 95°C for 30 sec, 55°C for 30 sec, and 72°C for 1 min, and 72°C for 5 min for final extension

M: 100 bp DNA Ladder (Cat. No. D-1030)
Line 1: 100ng Line 4: 100pg
Line 2: 10ng Line 5: 10 pg
Line 3: 1ng Line 6: No Template


Figure 3. Amplification of Human genomic DNA fragments from 1 kb to 10 kb using AccuPower® Pfu PCR PreMix.

M: 1 kb DNA Ladder (Cat. No. D-1040)
Line 1: 1 kb fragment Line 6: 6 kb fragment
Line 2: 2 kb fragment Line 7: 7 kb fragment
Line 3: 3 kb fragment Line 8: 8 kb fragment
Line 4: 4 kb fragment Line 9: 9 kb fragment
Line 5: 5 kb fragment Line 10: 10 kb fragment



 

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Manual

AccuPower® Pfu PCR PreMix

 

MSDS

• MSDS_AccuPower® Pfu PCR PreMix


 

Brochure

AccuPower® Pfu PCR PreMix - 2011 Brochure


 

Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate


 

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AccuPower® HotStart Pfu PCR PreMix


AccuPower® Hotstart Pfu PCR PreMix for high specific amplification


AccuPower® HotStart Pfu PCR PreMix is a ready-to-use lyophilized mastermix containing all components for high fidelity PCR. Just addition of primers and template into the tube provides reproducible results. AccuPower® HotStart Pfu PCR PreMix uses a unique enzyme-mediated HotStart PCR method that reduces pre-PCR mis-primings, primer dimers, artifacts, and any other non-specific amplification. Besides AccuPower® HotStart Pfu PCR PreMix provides sensitivity, high specificity and proofreading activity. So you’ll get fewer errors in your PCR product.
 

Principle

Enzyme-mediated Hotstart PCR method

Phyrophosphate (ppi) has a hjgh binding affinity for Mg and Ppi-Mg complex suppresses a non-specific application before starting the PCR reaction.
Pfu DNA Polymerase is active at the temperature 70°C via ….
 

Proofreading activity


Polymerase extends complementary strand with primers
If Polymerase adds an incorrect nucliotie, mis-paired nucleotide is removed through proofreading step.

Features and Benefits

High fidelity:
AccuPower® Hotstart Pfu PCR PreMix has the high fidelity which reduces the mispriming during DNA amplification.

Ease-of-Use:
Just add template and primers and start your reaction.

High specificity:
Pyrophosphate (PPi) has a high affinity for Mg2+ and PPi binds to Mg2+ which is essential component for PCR so that DNA polymerase activity is suppressed.. Consequently, PPi-Mg2+ binding prevents non-specific amplification

Reproducibility:
Each product batch is produced under strict quality control processes in large scale batch




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Specifications

5' to 3' exonuclease: No
3' to 5' exonuclease: Yes
3’ – A Overhang: No
Fragment Size: ≥5kb



Application

- Gene cloning with blunt ends
- Site-directed mutagenesis
- High fidelity amplification
- Highly specific PCR
- cDNA amplification



Experimental Data


Figure 1. Comparison of PCR amplification efficiency between AccuPower® Hotstart Pfu PCR PreMix of Bioneer and other suppliers' PCR master mix
Target: Human insulin receptor gene. The cycling conditions for AccuPower® Hotstart Pfu PCR PreMix were 95°C for 5 min, 30 cycles of 95°C for 30 sec, 55°C for 1 min and 72°C for 5min. PCR reactions using other suppliers' PCR master mix were performed according to each supplier's protocol.

Lane M : 100 bp DNA Ladder(Bioneer, Cat. No. D-1030)
Lane 1 : 10 ng of human genomic DNA
Lane 2 : 1 ng of human genomic DNA
Lane 3 : 100 pg of human genomic DNA
Lane 4 : 10 pg of human genomic DNA     



Figure 2. AccuPower® Hotstart Pfu PCR PreMix shows enhanced specificity compared to competitors.
Specificity test was performed using 7 different sets of primers targeting the P53 gene. 10 ng of human genomic DNA was used for each PCR reaction. The cycling conditions were 95°C for 5min, 32 cycles of 95°C for 30 sec, 62°C for 40 sec, and 72°C for 1 min 30sec, and 72°C for 5 min for final extension.

Lane 1: P75/73 primer set (139bp) Lane 2: P55/53 primer set (211bp) Lane 3: P55/63 primer set (447bp)
Lane 4: P75/83 primer set (618bp) Lane 5: P55/73 primer set1082bp) Lane 6: P65/83 primer set (1296bp)
Lane 7: P55/83 primer set (1561bp) Lane M: 100bp DNA Ladder (Bioneer, D-1030)                 


Figure 3. Comparison of PCR amplification specificity between AccuPower® Hotstart Pfu PCR PreMix of Bioneer and other suppliers' Pfu DNA polymerase.
Three different genes with two concentrations (100ng and 10ng) were amplified under the same conditions. The cycling conditions were 95°C for 5min, 35 cycles of 95°C for 30 sec, 62°C for 30 sec, and 72°C for 1 min 30 sec, and 72°C for 5 min for final extension.This data shows that AccuPower® Hotstart Pfu PCR PreMix has higher amplificition efficency and specificity than other suppliers' Pfu DNA polymerase.

Lane M: 100 bp DNA Ladder(Bioneer, Cat. No.D-1030)
Lane 1: 100 ng DNA, ApoE primer set (268 bp)
Lane 2: 10 ng DNA, ApoE primer set (268 bp)
Lane 3: 100 ng DNA, PrP primer set (500 bp)
Lane 4: 10 ng DNA, PrP primer set (500 bp)
Lane 5: 100 ng DNA, PrP primer set (705 bp)
Lane 6: 10 ng DNA, PrP primer set (705 bp)            



Figure 4. AccuPower® Hotstart Pfu PCR PreMix has high amplification efficiency.
The cycling conditions were 95°C for 5min, 35 cycles of 95°C for 20 sec, 65°C for 20 sec, and 68°C for 15 min , and 68°C for 5 min for final extension.

Lane M: 1 kb DNA Ladder (D-1040; Bioneer)
Lane 1: 2 kb fragment (Human tumor protein p53 gene)
Lane 2: 2.5 kb fragment (Human tumor protein p53 gene)
Lane 3: 3 kb fragment (Human tumor protein p53 gene)
Lane 4: 4.5 kb fragment (Human DNA cross-link repair 1A gene)
Lane 5: 5kb fragment (Human mitocodria gene)

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Manual

AccuPower® Hotstart Pfu PCR PreMix


MSDS

• MSDS_AccuPower® Hotstart Pfu PCR PreMix


Brochure

AccuPower® Hotstart Pfu PCR PreMix - 2012 Brochure


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate

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High fidelity PCR


Sample Prep


ExiPrep™ 16 Plus


Description

ExiPrep™ 16 Plus is a laboratory automation system able to extract DNA or RNA from various biological samples including tissue, cell culture, whole blood, serum, plasma, swab, Bacteria, yeast, etc. It also features the ability to purify His-tag recombinant proteins. ExiPrep™ 16 Plus can handle up to 16 samples at once and includes optimized extraction protocols for many sample types so you get the unsurpassed results from your nucleic acid or protein purification. The ExiPrep™ 16 Plus has advanced features such as an intuitive touch screen a UV sterilization cycle and a unique contamination shield, each designed to provide an extra level of confidence in your results.

Patent registration KR 10-1025135, US 2011-0009608
Patent application KR 10-2010-0002021


Features and Benefits

Easy-to-use: Built-in protocols started at the touch of a button
Walk-away automation: Maximizes your efficiency in the lab
Contamination shield: Eliminates the possibility of intra-assay cross-contamination
UV sterilization cycle after each run: Eliminates the possibility of inter-assay cross-contamination
Combined heating/.magnetic block: Increases elution and results in higher yields

Preinstalled Optimized Protocols for Maximum Results

newsfigure4ExiPrep™ 16 Plus contains over 900 optimized protocols for nucleic acid extraction and protein purification. Each protocol is fine-tuned to sample and target type to give anybody reproducible results every experiment.
The instrument software can also be upgraded through the network connection port so you can stay up-to-date with the best performing protocols.


Easy-to-use Touchscreen interface

newsfigure3 The responsive 3.5 inch touchscreen enables simple instrument operation. From selecting sample-optimized protocols to turning the UV sterilization lamp on and off, the touchscreen is designed for optimal workflow. During instrument operation, the touchscreen will give real-time feedback on the progress of the extraction, maximizing user convenience.

 

Automatic UV Sterilization Lamp

newsfigure5 The ExiPrep™ 16 Plus has a powerful UV sterilization lamp that enables the user to sterilize the instrument chamber before and/or after every nucleic acid extraction or protein purification run. This prevents possible inter-assay cross-contamination that may occur on a busy work day.



Contamination Shield

newsfigure6ExiPrep™ 16 Plus comes with a contamination shield designed to protect the assay from cross-contamination during instrument operation. Any time the pipette tips are moving, the contamination shield will slide under the tips, therefore eliminating the possibility of intra-assay cross-contamination which is critical when working with multiple samples.


Combined Magnetic/Heating Block

newsfigure5 To increase nucleic acid extraction and protein purification efficiency, the ExiPrep™ 16 Plus has an integrated combined magnetic/heating block. The combination of bead magnetization and sample heating reduces experiment time and increases elution efficiency, resulting in increased sample yield. (Patent pending)Process: Read clockwise.


 

Experimental Procedure



]]> Applications
Site Application
University and Corporate Laboratories Nucleic acid extraction and protein purification from various samples
University Hospital research center laboratories Nucleic acid extraction for research development from blood, tissue and various biological samples
Food companies Nucleic acid extraction for GMP/Food poisoning test from various food ingradients
Military, Police Nucleic acid extraction for the detection of biological terror bacteria or Food poisoning test

Specifications

Dimensions (W X H X D) 320 mm x 487 mm x 535 mm
Weight 22 kg
Temperature range 15 - 30°C
Humidity range 20 - 80%, no condensation
Operating system Standalone
User interface 320 x 240 touch screen graphic LCD
Input Voltage 100 - 240 VAC
Frequency 50 / 60 Hz
UV sterilization 15 minute cycle
Communications TCP/IP
Heat block 40 - 90°C


Comparisons

  ExiPrep™ 16 Plus ExiProgen
DNA/RNA Extraction O O
Protein Synthesis X O
Protein Purification O
TFT Touch Screen O O
Sample 16 samples 16 samples
UV sterilization O O
Heater & magnetic block O O
Contamination shield of catridge O O
TCP/IP network X Multiple systems can be daisy-chained together (up to 6)
Cooling system for sample store X O
Automatic aliquoting X O
Power supply 24VDC, 2.7A(60W) 24VDC, 7.5A(180W)
weigh 22kg 27kg

* ExiPrep™ 16 Plus does not offer storing function. When you purify proteins using ExiPrep™ 16 Plus, you can use ExiPrep™ 16 Plus in the cold chamber or cold room.

Experimental Data

1. Genomic DNA from cultured mammalian cell (HeLa)
  Sample volume: 1X106 cells
  Protocol number: 109
  Total prep time: about 1hr 30min.
  Average yield: 4-8ug


Procedure



Agarose gel analysis

Lanes 1, 3, 5, 7, 9, 11, 13, 15 were extracted with 1X106 cells of cultured HeLa cell and Lanes 2, 4, 6, 8, 10, 12, 14, 16 were extracted with ddH2O as a negative control in DNA extraction.
Note all samples have very similar yields. Purity was also tested and was consistently between 1.8 and 2.0 (not shown).


2. Genomic DNA from Bacteria (E.coli)
 
Sample volume: 1X109 cells
  Protocol number: 109
  Total prep time: about 1hr 40min.
  Average yield: 8-12ug

 

Procedure

Agarose gel analysis

Lanes 1, 3, 5, 7, 9, 11, 13, 15 were extracted with 1X109 cells of E.coli cells and Lanes 2, 4, 6, 8, 10, 12, 14, 16 were extracted with ddH2O as a negative control in DNA extraction.
Note all samples have very similar yields. Purity was also tested and was consistently between 1.9 and 2.0 (not shown).


3. Genomic DNA from Tissue (Bovine skeletal muscle)
 
Sample volume: ~25mg
  Protocol number: 102
  Total prep time: about 1hr 30min.
  Average yield: up to 20ug


Procedure



Agarose gel analysis

Lanes 1, 3, 5, 7, 9, 11, 13, 15 were extracted with 25mg of bovine tissues and Lanes 2, 4, 6, 8, 10, 12, 14, 16 were extracted with ddH2O as a negative control in DNA extraction.
Note all samples have very similar yields. Purity was also tested and was consistently between 1.9 and 2.0 (not shown).


4. Genomic DNA from Plant Tissue (Spinach leaf)
 
Sample volume: ~100mg
  Protocol number: 104
  Total prep time: about 1 hr
  Average yield: up to 5ug


Procedure



Agarose gel analysis

Lanes 1, 3, 5, 7, 9, 11, 13, 15 were extracted with 100mg of spinach leaves and Lanes 2, 4, 6, 8, 10, 12, 14, 16 were extracted with ddH2O as a negative control in DNA extraction.
Note all samples have very similar yields. Purity was also tested and was consistently between 1.9 and 2.0 (not shown).


5. RNA extraction from cultured mammalian cells (HeLa).
  Sample volume: 1.0 X 106 cells
  Protocol number: 202
  Average yield: up to 10 ug
  Average RQS: 9.5


Procedure



Electrophoresis result with LabChip GX

Results of capillary electrophoresis of total RNA extracted from HeLa cell(1X106 cells) using LabChip GX(Caliper life science, USA). Average RQS(RNA Quality Score) were at least 9.5t shown).

Real-time RT-PCR results of total RNA extracted from cultured cell


Real-time RT-PCR results using an AccuPower® RocketScrpt™ RT PreMix(K-2101, Bioneer) and AccuPower® Dualstar™ qPCR PreMix(K-6110, Bioneer) and run on Exicycler™ 96 Real-Time PCR System (A-2060, Bioneer) from total RNA extracted from HeLa cell(1X106 cells)



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Manual

ExiPrep™ 16 Plus


Brochure

ExiPrep™ 16 Plus


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate

• CE - certificate

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ExiProgen™ EC-Maxi Protein Synthesis Kit


ExiProgen™ EC-Maxi Protein Synthesis Kit enables it to synthesize large scale of protein using the patented SECF (Stepwise Exchange Cell-Free) Protein Synthesis technology.
 


This kit is for automated large scale synthesis of a target protein using the patented SECF(Stepwise Exchange Cell-Free) protein synthesis technology. After adding template DNA into ExiProgen™ and choosing protocol No. 903, up to 500 µg of target protein can be automatically synthesized within a day. All processes including protein synthesis and dialysis will be performed in an automated fashion and the final protein harvested in a storage solution of choice.

Features and Benefits

Fully automatic: DNA-in-Protein (in storage buffer)-out
By simply installing 1-10 µg of template DNA into ExiProgen™, the target protein is synthesized and harvested in
any storage buffer of choice.

Parallel processing
1-8 different proteins can be synthesized in a single run.

High purity and high yield
Up to 500 ug of protein can be obtained per well with a purity of >90%.


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Procedure and principle

This kit is designed for automated large scale expression of a target protein using patented SECF technology using ExiProgen™. It utilizes cell-free protein synthesis and purification using Ni-NTA magnetic beads. As it provides energy source in a stepwise manner into reaction tubes, the yields are maximized.

As described above, template DNA is mixed in a reaction tube with E. coli extract and Master mix. The reaction tube is installed into ExiProgen™' s reaction block along with other reagents. Finally, choose protocol and initiate run.

ExiProgen™ begins to synthesize the target protein by providing the energy source in stepwise manner. The synthesized target protein is then purified via Ni-NTA magnetic beads.


Experimental results

1. Up to eight proteins with various sizes can be synthesized in a single run.



M1; AccuLadder™ Protein Size Marker (Low)
1; CalmL3 (17.5kDa) , 2; DUSP 3 (22kDa),
3; CAT (24kDa), 4; AcGFP (29kDa),
5; RFP(30 kDa) 6; EF-Ts (34kDa),
7; VF (45kDa), 8; BM3 (117kDa)
M2; AccuLadder™ Protein Size Marker (Broad)
* Amount of loading sample is 1/80 of total sample.

Note) Bioneer highly recommends using plasmid DNA containing target gene for this kit.


Kit contents and storage conditions

This kit consists of two separate boxes, and its components are described in the following table.

Components Storage temperature
Kit 1 Cartridge ① 96 well x 1ea at 4°C
Dialysis tube 1 pack (16 ea/pack)
Disposable filter tip 1 pack (8 ea/pack) at room temperature
Protection cover 1 ea
Kit 2 Cartridge ② 96 well x 1ea at -20°C
(upon receiving,
E. coli extract is
recommended to be
stored at -70°C)
E. coli extract 8-tube strip (Yellow) x 1 ea
Master mix 8-tube strip (Violet) x 1 ea
DEPC DW 8-tube strip (White) x 1 ea
Storage buffer 35 mL bottle x 2 ea
Positive control DNA 1.5mL tube x 1 ea






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Manual

Manual ExiProgen™ EC-Maxi Protein Synthesis Kit


MSDS

MSDS ExiPrep™ EC-Maxi Protein Synthesis Kit


Brochure

Brochure ExiProgen™ EC-Maxi Protein Synthesis Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate



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ExiProgen™ EC-Disulfide Protein Synthesis Kit


ExiProgen™ EC-Disulfidee Protein Synthesis Kit enables it to automatically synthesize target protein with disulfide bonds. It can be much more effectively used than cell based protein expression system because it can synthesizes protein with up to nine disulfide bonds.


This kit is used for synthesizing a protein that contains disulfide bonds using ExiProgen™. Used in conjunction with ExiProgen™, it can synthesize a protein that contains up to nine disulfide bonds in a fully automated manner and more efficiently than using cell-based synthesis. After adding template DNA and associated reagents into ExiProgen™ and using protocol No. 905, the target protein can be synthesized within a day. All processes, including protein synthesis and dialysis, are performed in an automated manner and the final protein is harvested in any storage buffer of choice.

Features and Benefits

Protein synthesis with disulfide bond
This kit is used to synthesize a protein that has two or more disulfide bonds, providing its intact function.

Fully automated: DNA-in-Protein (in storage buffer)-out
Purified target protein is eluted in a storage buffer of choice.

Parallel processing system
1-8 different proteins can be synthesized in a single run.

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Procedure and principle

This kit uses oxidative environment during protein synthesis which is different from the conventional reducing environment. The energy source will be continuously provided to the reaction, and the target protein is purified using Ni-NTA magnetic beads.



Via the patented SECF technology, ExiProgen™ synthesizes the target protein.

This kit contains chaperons for helping protein-folding and highly optimized buffer for disulfide bond formation.


Experimental results

1. This kit can synthesize a protein with disulfide bonds resulting in proteins with functional activity.


Left Pannel: Expression and purification of ScFV and rPA.

M: AccuLadder™ Protein Size Marker (Low), 1: ScFV (it has 2 disulfide bonds.), 2: rPA (it has 9 disulfide bonds)
* Amount of purification sample is 1/40 of total sample.

Right panel: rPA synthesized with ExiProgen™ EC2 Protein Synthesis Kit has an enzyme activity.
1: Synthesis sample using ExiProgen™ EC Maxi Protein Synthesis Kit.
2: Synthesis sample using ExiProgen™ EC2 Protein Synthesis Kit.
* rPA activity was measured by incubating with chromogenic substrate S-2288.


 

Application

This kit can be used to produce scFv for antibody screening.


 

Kit contents and storage conditions

This kit consists of two separate boxes, and its components are described in the following table.

Components Storage temperature
Kit 1 Cartridge ① 96 well x 1ea at 4°C
Dialysis tube 1 pack (16 ea/pack)
Disposable filter tip 1 pack (8 ea/pack) at room temperature
Protection cover 1 ea
Kit 2 Cartridge ② 96 well x 1ea at -20°C
(upon receiving,
E. coli extract is
recommended to be
stored at -70°C)
E. coli extract 8-tube strip (Yellow) x 1 ea
Master mix 8-tube strip (Violet) x 1 ea
DEPC DW 8-tube strip (White) x 1 ea
Storage buffer 35 mL bottle x 2 ea
Expression screening set 1 box
Positive control DNA 1.5mL tube x 1 ea


 

 


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ExiProgen™ EC-Tagfree Protein Synthesis Kit


ExiProgen™ EC-Tagfree Protein Synthesis Kit enables it to synthesize highly purified His-tag free protein and it can be applied in X-ray crystallography, therapeutic protein development, and antigen expression for antibody development.



This kit is used for generating a protein without His-tag sequence with high purity on ExiProgen™. It first synthesizes a protein with a His-tag in ExiProgen™ in an automated manner. Then the His-tag is cleaved off, resulting in a pure protein without a His-tag sequence. Using protocol No. 904 the target protein can be synthesized with a high purity. All processes, including protein synthesis and dialysis, are performed in an automated manner and the final protein is harvested in any storage buffer of choice.


Features and Benefits

Protein synthesis without His-tag
A target protein is produced in a fully automated way and the His-tag is cleaved from the final protein.

Fully automated: DNA-in-Protein (in storage buffer)-out
Purified target protein will be in any storage buffer of choice.

Parallel processing and high purity
1-8 different proteins can be synthesized in a single run with purity >95%.

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Procedure and principle

This kit is for an automated expression of a target protein using patented SECF (Stepwise Exchange Cell-Free) technology. The expressed protein is bound to Ni-NTA magnetic beads and then released by cleaving with TEV (Tobacco Etch Virus) Protease.



ExiProgen™ begins to synthesize the target protein by providing the energy source in stepwise manner. The synthesized target protein is then purified via Ni-NTA magnetic beads.
Via the patented SECF technology, ExiProgen™ synthesizes and purifies a target protein without a His-tag.

The structure of template DNA

The template DNA elements should be organized as follows.


The His-tag should be at 5' end of the target protein and TEV cleavage sequence should be placed in between the His-tag and the target protein.


The resulting purified protein will have only one extra amino acid (Glycine or Serine) at the N-terminus of the target protein. Any amino acid can be placed in the X position. Bioneer's positive control template DNA for this kit has Gln-Asn-Leu-Tyr-Phe-Gln-Gly.

Note) This kit may not be compatible with some proteins showing low solubility or low yield when it has extra amino acids at its N-terminus. Therefore, Bioneer recommends checking its expression properties using AccuRapid™ Cell-Free Protein Expression Kit (page 16) before using this kit.


 

Experimental results

1. Various proteins can be synthesized in a single run. The yield will be up to 200 ug per well.

M; AccuLadder™ Protein Size Marker (Low) 1; DUSP3 (22 kDa), 2; hGH (23 kDa), 3; CAT (24 kDa), 4; AcGFP (28 kDa),
* Amount of purification sample is 1/80 of total sample.
 

2. The target protein will have the His-tag removed


M; AccuLadder™ Protein Size Marker (Low)
1: Expression sample of pBIVT-TEV-AcGFP 2: His tag-TEV-AcGFP (His tagged sample), 3: AcGFP (His tag-free sample)


Application

The synthesis and purification of a protein without a tag is potentially useful for many applications including X-ray crystallography, therapeutic protein development, and antigen expression for antibody development.


Kit contents and storage conditions

This kit consists of two separate boxes, and its components are described in the following table.

Components Storage temperature
Kit 1 Cartridge ① 96 well x 1ea at 4°C
Dialysis tube 1 pack (16 ea/pack)
Disposable filter tip 1 pack (8 ea/pack) at room temperature
Protection cover 1 ea
Kit 2 Cartridge ② 96 well x 1ea at -20°C
(upon receiving,
E. coli extract is
recommended to be
stored at -70°C)
E. coli extract 8-tube strip (Yellow) x 1 ea
Master mix 8-tube strip (Violet) x 1 ea
DEPC DW 8-tube strip (White) x 1 ea
Storage buffer 35 mL bottle x 2 ea
Positive control DNA 1.5mL tube x 1 ea

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Manual

Manual ExiProgen™ EC-Tagfree Protein Synthesis Kit


MSDS

MSDS ExiPrep™ EC-Tagfree Protein Synthesis Kit


Brochure

Brochure ExiProgen™ EC-Tagfree Protein Synthesis Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate

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ExiProgen™ ProXpress PCR Template Kit


ExiProgen™ ProXpress PCR Template Kit is the most optimized product for preparing template DNA for protein synthesis on the ExiProgen™.



This Kit is for the generation of template DNA using PCR without cloning process, providing all required reagents except the 1st primer set needed for the amplification of the target gene. The template DNA generated can be used to produce a target protein on manual procedure or on ExiProgen™.

Features and Benefits

Protein synthesis (expression and purification) without cloning within 1 day
Template DNA can be easily generated by just two step PCR from cDNA or genomic DNA in about 7 hours.
Therefore, target protein can be produced within a day using this kit with ExiProgen™.

Accurate protein template by high fidelity PCR
Because this kit uses AccuPower® ProFi Taq PCR premix and long & high fidelity PCR premix, you can obtain a
high quality template DNA with a minimal occurrence of error in the sequence.

High efficiency
This kit has been thoroughly optimized to ExiProgen™ so that small quantity of DNA can be used to produce up to 100 ug
of protein. (Optimal DNA quantity: A gene <1 Kb, 500 ng; A gene size of 1-2 Kb, 1 ug).


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Procedure

This kit uses two step PCR to generate template DNA. The procedure is described below.

1) 1st PCR: The DNA encoding a protein of interest will be amplified. The PCR product will contain start and stop codon, whole coding region of the protein, and additional sequences for the 2nd PCR. The primers for this step are gene specific primers with overhangs and can be ordered on the Bioneer's website.

2) 2nd PCR: Using a product from the 1st PCR, 2nd PCR performed using primer set by which T7 promoter and RBS are introduced at its 5’ end and T7 terminator is added at its 3' end. PCR product after 2nd PCR should be gel-purified for the cell-free protein synthesis.


 

Experimental results


Figure 1. Agarose gel data of template DNA synthesized by each PCR
Synthesis of linear template DNA with ExiProgen™ ProXpress PCR Template Kit. M1; 100bp DNA Ladder(Bioneer, D-1030), M2; 1kb DNA Ladder(Bioneer, D-1040) 1; SAV (Template – pT), 2; RNase H (Template – BL21(DE3) gDNA), 3; hGH (Template – pT) 4; CAT (Template - pBIVT), 5; UDG (Template - BL21(DE3) gDNA), 6; AcGFP (Template – pBIVT), 7; EVO (Template – pT), 8; RFP (Template – pIVEX), 9; Poly A polymerase (Template – pET15b),                


Figure 2. PAGE gel data for synthesized proteins.
Each linear template DNA generated by ExiProgen™ ProXpress PCR Template Kit are used as template for protein synthesis with ExiProgen™ EC Protein Synthesis Kit.
M; AccuLadder™ Protein Size Marker (Low)(Bioneer, D-2020), 1; SAV (13 kDa), 2; RNase H (20 kDa),3; hGH (23 kDa), 4; CAT (26.5 kDa), 5; UDG (28 kDa), 6; AcGFP (28 kDa),7; EVO (30 kDa), 8; RFP (31kDa), 9; Poly A polymerase (54 kDa)


 

Kit contents

Components K-7400 (16 reactions) K-7401(32 reactions)
AccuPower® ProFi Taq PCR Premix (20ul) 96 tubes 192 tubes
N terminus upstream cassette (5 ng/ul) 5 ul x 16 tubes (Yellow, NU) 5 ul x 32 tubes (Yellow, NU)
N terminus downstream cassette (5 ng/ul) 5 ul x 16 tubes (Yellow, ND) 5 ul x 32 tubes (Yellow, ND)
C terminus upstream cassette (5 ng/ul) 5 ul x 16 tubes (Violet, CU) 5 ul x 32 tubes (Violet, CU)
C terminus downstream cassette (5 ng/ul) 5 ul x 16 tubes (Violet, CD) 5 ul x 32 tubes (Violet, CD)
2nd Forward primer (10 pmoles/ul) 5 ul x 16 tubes (White, 2F) 5 ul x 32 tubes (White, 2F)
2nd Reverse primer (10 pmoles/ul) 5 ul x 16 tubes (White, 2R) 5 ul x 32 tubes (White, 2R)


 

Storage condition

at - 20°C

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Manual

Manual ExiProgen™ ProXpress PCR Template Kit


MSDS

MSDS ExiPrep™ ProXpress PCR Template Kit


Brochure

Brochure ExiProgen™ ProXpress PCR Template Kit


Quality Assurance

Bioneer is the holder of Quality Management System Certificates for the following standards.

• ISO 9001:2008 - certificate

• EN ISO 13485:2003 / AC:2009 - certificate

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